FFCP PHASE1:Hg19::chr19:4402613..4402658,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10036 | |EntrezGene=10036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1910 | |HGNC=1910 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLF8 | |UniProt=C9JLF8 | ||
|association_with_transcript=0bp_to_ENST00000344143,ENST00000535117_5end | |association_with_transcript=0bp_to_ENST00000344143,ENST00000535117_5end | ||
|cluster_id=chr19:4402613..4402658,+ | |||
|coexpression_cluster_id=C1011 | |||
|description=CAGE_peak_1_at_CHAF1A_5end | |description=CAGE_peak_1_at_CHAF1A_5end | ||
|id=chr19:4402613..4402658,+ | |id=chr19:4402613..4402658,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.44e-10!254;CL:0002319!9.54e-08!25;CL:0000333!1.50e-07!41;CL:0000133!8.16e-07!59 | |ontology_enrichment_celltype=CL:0000066!3.44e-10!254;CL:0002319!9.54e-08!25;CL:0000333!1.50e-07!41;CL:0000133!8.16e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;9.57e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-10,253;CL:0002319,9.52e-08,25;CL:0000333,1.50e-07,41;CL:0000133,8.14e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.17e-46!235;DOID:14566!5.64e-45!239;DOID:2531!5.33e-23!51;DOID:0060083!5.33e-23!51;DOID:0050687!6.60e-23!143;DOID:0050686!1.18e-20!137;DOID:1240!2.37e-19!39;DOID:305!1.47e-16!106;DOID:8692!1.94e-15!31;DOID:3095!2.59e-07!22;DOID:2994!2.59e-07!22 | |ontology_enrichment_disease=DOID:162!2.17e-46!235;DOID:14566!5.64e-45!239;DOID:2531!5.33e-23!51;DOID:0060083!5.33e-23!51;DOID:0050687!6.60e-23!143;DOID:0050686!1.18e-20!137;DOID:1240!2.37e-19!39;DOID:305!1.47e-16!106;DOID:8692!1.94e-15!31;DOID:3095!2.59e-07!22;DOID:2994!2.59e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.05e-15;39!DOID:8692;6.21e-15;31!DOID:2531;3.10e-14;51!DOID:0060083;3.10e-14;51!DOID:3095;2.58e-07;22!DOID:2994;2.58e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.20e-46,235;DOID:14566,5.91e-45,239;DOID:2531,5.29e-23,51;DOID:0060083,5.29e-23,51;DOID:0050687,6.55e-23,143;DOID:0050686,1.19e-20,137;DOID:1240,2.36e-19,39;DOID:305,1.46e-16,106;DOID:8692,1.93e-15,31;DOID:3095,2.58e-07,22;DOID:2994,2.58e-07,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CHAF1A | |short_description=p1@CHAF1A | ||
}} | }} |
Latest revision as of 11:13, 18 September 2015
Short description: | p1@CHAF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHAF1A_5end |
Coexpression cluster: | C1011_acute_granulocyte_Hodgkin_neuroepithelioma_retinoblastoma_hepatoblastoma_merkel |
Association with transcript: | 0bp_to_ENST00000344143, ENST00000535117_5end |
EntrezGene: | CHAF1A |
HGNC: | 1910 |
UniProt: | C9JLF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-10 | 253 |
neural cell | 9.52e-08 | 25 |
migratory neural crest cell | 1.50e-07 | 41 |
neurectodermal cell | 8.14e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.20e-46 | 235 |
disease of cellular proliferation | 5.91e-45 | 239 |
hematologic cancer | 5.29e-23 | 51 |
immune system cancer | 5.29e-23 | 51 |
cell type cancer | 6.55e-23 | 143 |
organ system cancer | 1.19e-20 | 137 |
leukemia | 2.36e-19 | 39 |
carcinoma | 1.46e-16 | 106 |
myeloid leukemia | 1.93e-15 | 31 |
germ cell and embryonal cancer | 2.58e-07 | 22 |
germ cell cancer | 2.58e-07 | 22 |