FFCP PHASE1:Hg19::chr19:6416305..6416309,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6416305..6416309,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:6416305..6416309,- | |description=CAGE_peak_at_chr19:6416305..6416309,- | ||
|id=chr19:6416305..6416309,- | |id=chr19:6416305..6416309,- | ||
|ontology_enrichment_celltype=CL:0000548!2.39e-13!679;CL:0000004!2.39e-13!679;CL:0000255!2.39e-13!679;CL:0000012!2.69e-13!682;CL:0000144!2.22e-11!625;CL:0000055!2.35e-11!180;CL:0002371!5.86e-11!591;CL:0002321!1.94e-10!248;CL:0000003!2.87e-10!722;CL:0000220!4.04e-10!246;CL:0000071!2.40e-08!18;CL:0002546!2.40e-08!18;CL:0000222!6.25e-08!119;CL:0000115!4.25e-07!35;CL:0002319!4.29e-07!25 | |ontology_enrichment_celltype=CL:0000548!2.39e-13!679;CL:0000004!2.39e-13!679;CL:0000255!2.39e-13!679;CL:0000012!2.69e-13!682;CL:0000144!2.22e-11!625;CL:0000055!2.35e-11!180;CL:0002371!5.86e-11!591;CL:0002321!1.94e-10!248;CL:0000003!2.87e-10!722;CL:0000220!4.04e-10!246;CL:0000071!2.40e-08!18;CL:0002546!2.40e-08!18;CL:0000222!6.25e-08!119;CL:0000115!4.25e-07!35;CL:0002319!4.29e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000115;9.51e-09;36!CL:0002367;4.64e-08;2!CL:0002188;3.80e-07;5!CL:0000071;9.72e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.27e-10,36;CL:0002367,3.50e-08,2;CL:0002078,1.24e-07,45;CL:0002188,3.19e-07,5;CL:0000071,7.77e-07,18;CL:0002546,7.77e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;9.72e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.40e-08!18;UBERON:0004638!2.40e-08!18;UBERON:0004852!2.40e-08!18;UBERON:0000490!2.96e-08!138;UBERON:0003914!7.09e-08!118;UBERON:0004535!1.10e-07!110;UBERON:0002049!1.57e-07!79;UBERON:0007798!1.57e-07!79;UBERON:0001009!5.12e-07!113;UBERON:0000119!6.26e-07!312 | |ontology_enrichment_uberon=UBERON:0001986!2.40e-08!18;UBERON:0004638!2.40e-08!18;UBERON:0004852!2.40e-08!18;UBERON:0000490!2.96e-08!138;UBERON:0003914!7.09e-08!118;UBERON:0004535!1.10e-07!110;UBERON:0002049!1.57e-07!79;UBERON:0007798!1.57e-07!79;UBERON:0001009!5.12e-07!113;UBERON:0000119!6.26e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0005969;4.64e-08;2!UBERON:0003956;4.64e-08;2!UBERON:0004638;9.72e-07;18!UBERON:0001986;9.72e-07;18!UBERON:0004852;9.72e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.50e-08,2;UBERON:0003956,3.50e-08,2;UBERON:0004638,7.77e-07,18;UBERON:0001986,7.77e-07,18;UBERON:0004852,7.77e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0.873765488520689,0,0.74259811776028,0.994192127183747,0,0.602694528023977,0,0,1.10808952269109,0.612002073732759,0.940364164434263,2.28988789704845,0.958120975510189,0.87879847716362,0.229240217243854,0.328402357799783,0.0787107813136792,0,0,0,0.919421224478927,1.204823675113,0.739508020333575,3.17615522379237,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.557052284425868,0.294605907474837,0,0,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.175669571386252,5.89405839739707,0,0,0,0.348259474598534,0,0,0,0,2.18638648103376,0.860234595106124,0.694281003215189,0.56530794192401,0.838998872419812,0.550236083880135,1.04497483268405,0,0,0,0.402829317109147,0.760272105718513,0,1.47065232138347,0,0.446498641420399,0.22452937262617,0.450445921933289,1.53316637465883,2.84779697870439,1.28241220751285,0,0,2.18047026071267,0,0.12663051166458,0,0,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0.756787138224657,0.576175924479999,0,0.624320153660641,1.1409436430889,0,0,0.323745888736263,0.280901613404497,0.61246251376468,0.61417158655884,0.103325781175765,0,0,0,0,0.841680569770331,0.500474079487857,0.831192346452549,0,0,0,0.680593098960126,0,0.213557388818567,0.211931901159562,0,0.412210116953756,0,0.558350568994769,0,0,0,0.184099797284599,0.161646056818812,0,0.403008392910561,0.169560592310488,0.193260853163297,0.545492241181669,0,0.243947412259191,0.265059536642971,0.464775771478074,0,0.504641701751257,0.36497735907583,0,0,2.76269842704961,0,0,0,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0.491953754172454,0.857839051492628,0,1.1240175325762,0.301586917234893,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0.352226082707465,0.433099343283221,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0.300343057843917,0,0.672786506072164,0,0.7333828582095,0,3.57656445851882,0.845302752556,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,1.08524321078289,0,0.325736184293735,0.355391948742546,2.37585561880029,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,0,0,0,1.01637849688985,0,0,1.00509759200609,0,0.749007023947182,0,0,0.613457458595699,1.00034104211935,0.271265023699736,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0.664225598535437,0,0.60818530127658,0.783204629850962,0,0,0,0.106727557803444,0.909382714338778,0,0,0,0,0,0,0,0,0,0.771048469013278,0.532685175939381,0.657017248110473,1.55776328755086,0.813472649219715,0.241718899183244,0,0.0920809889358963,0.114814448164607,0,0.393373244878272,0.451199612907412,0.308061348417659,3.13739907670742,1.46139224653261,0.422206515571503,1.13733384070897,0,0.215915916102139,1.54227252690289,0.812839312631559,0,0,0,0.447749509444357,0.657779629937804,1.0457418040996,1.02580050046556,0,0,0,0,0.165018999841176,0.574265537996172,0,0,0.290012154876366,0.616194468458578,0.15350367472613,0.275673144969061,0,0.580066775656914,0.681813019328807,0.356128142586949,0,0,0.255225424989168,0.10115778085555,0,0,1.3940745403212,1.84820148105653,0,0,0,0.143124886741991,0,0.949138274156178,0.190630193923825,0.511795582622668,0,2.86382923133343,0.78494864019923,0.719489830333259,0.823611089208164,0.589062011728432,0.404364963146632,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.818999468447914,0.989838023675989,0,2.2054613741845,0.66343897524122,0,0,0,0.202910376962704,0,1.97186921772569,0.717056761020258,0.196498082026242,0.7133421029625,0.709522128141196,0,0,1.89736586882858,1.04980416073495,0.384888450902048,0,3.26672954583968,0,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,0,0,0,0.747768497892312,0,0,0.185803175125719,0.28853842595289,0.0711418433484141,0.318852545457645,0,0.383010740264733,0.211673582723883,0.324621940274555,0,0,0.47003968731907,0,0,0.1605880751037,0,0,0,0.614481528616916,0,0.333698283423817,0.390776190804081,0.278406173895242,0,0,0.33307196799782,0,0,0,0.849523652246594,0,0.568272293612826,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,0,1.53471711068062,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,1.16348177330109,0.225595660617181,0,0.335643173951685,1.13852239634511,0.794682894901893,0,0.65293123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| ||
|short_description=p@chr19:6416305..6416309,- | |short_description=p@chr19:6416305..6416309,- | ||
}} | }} |
Latest revision as of 18:06, 27 July 2015
Short description: | p@chr19:6416305..6416309, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6416305..6416309, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.27e-10 | 36 |
trabecular meshwork cell | 3.50e-08 | 2 |
meso-epithelial cell | 1.24e-07 | 45 |
glomerular endothelial cell | 3.19e-07 | 5 |
blood vessel endothelial cell | 7.77e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.77e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 3.50e-08 | 2 |
aqueous drainage system | 3.50e-08 | 2 |
blood vessel endothelium | 7.77e-07 | 18 |
endothelium | 7.77e-07 | 18 |
cardiovascular system endothelium | 7.77e-07 | 18 |