FFCP PHASE1:Hg19::chr1:144520117..144520134,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:144520117..144520134,+ | |||
|coexpression_cluster_id=C1576 | |||
|description=CAGE_peak_at_chr1:144520117..144520134,+ | |description=CAGE_peak_at_chr1:144520117..144520134,+ | ||
|id=chr1:144520117..144520134,+ | |id=chr1:144520117..144520134,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.88e-17!140;CL:0002087!1.54e-15!119;CL:0000542!2.10e-14!53;CL:0000051!2.10e-14!53;CL:0000838!5.58e-14!52;CL:0002031!1.62e-13!124;CL:0000791!1.55e-11!18;CL:0000789!1.55e-11!18;CL:0002420!1.55e-11!18;CL:0002419!1.55e-11!18;CL:0000790!1.55e-11!18;CL:0000037!1.18e-08!172;CL:0000566!1.18e-08!172;CL:0000988!1.84e-08!182;CL:0000625!3.01e-08!11;CL:0002032!1.40e-07!165;CL:0000837!1.40e-07!165;CL:0000945!2.97e-07!24;CL:0000826!2.97e-07!24;CL:0000236!6.21e-07!14 | |ontology_enrichment_celltype=CL:0000738!4.88e-17!140;CL:0002087!1.54e-15!119;CL:0000542!2.10e-14!53;CL:0000051!2.10e-14!53;CL:0000838!5.58e-14!52;CL:0002031!1.62e-13!124;CL:0000791!1.55e-11!18;CL:0000789!1.55e-11!18;CL:0002420!1.55e-11!18;CL:0002419!1.55e-11!18;CL:0000790!1.55e-11!18;CL:0000037!1.18e-08!172;CL:0000566!1.18e-08!172;CL:0000988!1.84e-08!182;CL:0000625!3.01e-08!11;CL:0002032!1.40e-07!165;CL:0000837!1.40e-07!165;CL:0000945!2.97e-07!24;CL:0000826!2.97e-07!24;CL:0000236!6.21e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.20e-14;18!CL:0000789;2.20e-14;18!CL:0002419;2.20e-14;18!CL:0000542;9.13e-11;53!CL:0000625;6.35e-10;11!CL:0000236;8.19e-09;13!CL:0000084;9.39e-09;25!CL:0000945;2.17e-08;24!CL:0002087;1.38e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.98e-21,136;CL:0002087,1.12e-18,115;CL:0000542,4.86e-18,53;CL:0000051,4.86e-18,53;CL:0000838,1.66e-17,52;CL:0002031,1.11e-16,120;CL:0000791,5.36e-14,18;CL:0000789,5.36e-14,18;CL:0002420,5.36e-14,18;CL:0002419,5.36e-14,18;CL:0000790,5.36e-14,18;CL:0000988,3.48e-13,177;CL:0000037,1.04e-12,168;CL:0002032,4.75e-11,161;CL:0000837,4.75e-11,161;CL:0000625,6.69e-10,11;CL:0000236,9.09e-09,14;CL:0000945,1.33e-08,24;CL:0000826,1.33e-08,24;CL:0000084,2.15e-08,25;CL:0000827,2.15e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.20e-14;18!CL:0000051;9.13e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.08e-08,98;UBERON:0003061,8.08e-08,98;UBERON:0002193,4.35e-07,108 | |||
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| ||
|short_description=p@chr1:144520117..144520134,+ | |short_description=p@chr1:144520117..144520134,+ | ||
}} | }} |
Latest revision as of 20:39, 27 July 2015
Short description: | p@chr1:144520117..144520134, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:144520117..144520134, + |
Coexpression cluster: | C1576_Mast_CD4_Natural_CD19_Basophils_CD8_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.98e-21 | 136 |
nongranular leukocyte | 1.12e-18 | 115 |
lymphocyte | 4.86e-18 | 53 |
common lymphoid progenitor | 4.86e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.66e-17 | 52 |
hematopoietic lineage restricted progenitor cell | 1.11e-16 | 120 |
mature alpha-beta T cell | 5.36e-14 | 18 |
alpha-beta T cell | 5.36e-14 | 18 |
immature T cell | 5.36e-14 | 18 |
mature T cell | 5.36e-14 | 18 |
immature alpha-beta T cell | 5.36e-14 | 18 |
hematopoietic cell | 3.48e-13 | 177 |
hematopoietic stem cell | 1.04e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.75e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.75e-11 | 161 |
CD8-positive, alpha-beta T cell | 6.69e-10 | 11 |
B cell | 9.09e-09 | 14 |
lymphocyte of B lineage | 1.33e-08 | 24 |
pro-B cell | 1.33e-08 | 24 |
T cell | 2.15e-08 | 25 |
pro-T cell | 2.15e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.08e-08 | 98 |
blood island | 8.08e-08 | 98 |
hemolymphoid system | 4.35e-07 | 108 |