FFCP PHASE1:Hg19::chr1:145727570..145727575,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5174 | |EntrezGene=5174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8821 | |HGNC=8821 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2W1,B4DPB9,E7EU02 | |UniProt=Q5T2W1,B4DPB9,E7EU02 | ||
|association_with_transcript=-90bp_to_NM_001201325,NM_001201326,NM_002614_5end | |association_with_transcript=-90bp_to_NM_001201325,NM_001201326,NM_002614_5end | ||
|cluster_id=chr1:145727570..145727575,+ | |||
|coexpression_cluster_id=C2520 | |||
|description=CAGE_peak_11_at_PDZK1_5end | |description=CAGE_peak_11_at_PDZK1_5end | ||
|id=chr1:145727570..145727575,+ | |id=chr1:145727570..145727575,+ | ||
|ontology_enrichment_celltype=CL:0000349!6.42e-19!3;CL:0002577!6.42e-19!3;CL:0002536!6.32e-13!2;CL:0002541!1.75e-08!3 | |ontology_enrichment_celltype=CL:0000349!6.42e-19!3;CL:0002577!6.42e-19!3;CL:0002536!6.32e-13!2;CL:0002541!1.75e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;2.30e-30;3!CL:0002536;1.96e-12;2!CL:0000349;3.61e-11;19!CL:0002231;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.98e-30,3;CL:0002536,1.85e-12,2;CL:0000349,3.42e-11,19;CL:0002231,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.34e-30;3!UBERON:0003918;1.01e-09;10!UBERON:0007687;1.01e-09;10 | |||
|ontology_enrichment_disease=DOID:4468!2.16e-12!2 | |ontology_enrichment_disease=DOID:4468!2.16e-12!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.89e-40!14;UBERON:0000158!9.89e-40!14;UBERON:0003124!2.10e-29!7;UBERON:0001987!7.15e-24!4;UBERON:0004340!7.15e-24!4;UBERON:0000478!1.94e-22!24;UBERON:0000305!1.36e-13!7;UBERON:0004923!3.11e-12!57;UBERON:0004871!6.56e-12!8;UBERON:0002037!1.15e-09!6;UBERON:0006215!1.15e-09!6;UBERON:0000476!1.75e-08!3;UBERON:0000920!1.75e-08!3;UBERON:0000995!7.92e-07!21 | |ontology_enrichment_uberon=UBERON:0005631!9.89e-40!14;UBERON:0000158!9.89e-40!14;UBERON:0003124!2.10e-29!7;UBERON:0001987!7.15e-24!4;UBERON:0004340!7.15e-24!4;UBERON:0000478!1.94e-22!24;UBERON:0000305!1.36e-13!7;UBERON:0004923!3.11e-12!57;UBERON:0004871!6.56e-12!8;UBERON:0002037!1.15e-09!6;UBERON:0006215!1.15e-09!6;UBERON:0000476!1.75e-08!3;UBERON:0000920!1.75e-08!3;UBERON:0000995!7.92e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.60e-23;4!UBERON:0002037;1.17e-15;6!UBERON:0002680;9.00e-11;9!UBERON:0001895;9.00e-11;9!UBERON:0000478;5.65e-09;24!UBERON:0004733;2.60e-08;12!UBERON:0002028;2.60e-08;12!UBERON:0000077;5.24e-08;27!UBERON:0004732;9.68e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.11e-23,4;UBERON:0004340,4.11e-23,4;UBERON:0002037,1.05e-15,6;UBERON:0006215,1.05e-15,6;UBERON:0005631,6.07e-15,14;UBERON:0000158,6.07e-15,14;UBERON:0003124,1.15e-13,7;UBERON:0006554,7.50e-12,47;UBERON:0001008,1.31e-11,48;UBERON:0002680,8.37e-11,9;UBERON:0001895,8.37e-11,9;UBERON:0010092,8.37e-11,9;UBERON:0000478,5.43e-09,24;UBERON:0004733,2.46e-08,12;UBERON:0002028,2.46e-08,12;UBERON:0007277,2.46e-08,12;UBERON:0004732,9.20e-08,13;UBERON:0000077,1.71e-07,29;UBERON:0003076,7.63e-07,15;UBERON:0003057,7.63e-07,15 | |||
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|short_description=p11@PDZK1 | |short_description=p11@PDZK1 | ||
}} | }} |
Latest revision as of 18:57, 16 September 2015
Short description: | p11@PDZK1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PDZK1_5end |
Coexpression cluster: | C2520_mesothelioma_Placental_Amniotic_serous_kidney_renal_amniotic |
Association with transcript: | -90bp_to_NM_001201325, NM_001201326, NM_002614_5end |
EntrezGene: | PDZK1 |
HGNC: | 8821 |
UniProt: | Q5T2W1B4DPB9E7EU02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@PDZK1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.98e-30 | 3 |
amniotic epithelial cell | 1.85e-12 | 2 |
extraembryonic cell | 3.42e-11 | 19 |
epithelial cell of prostate | 1.40e-08 | 3 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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placenta | 4.11e-23 | 4 |
allantois | 4.11e-23 | 4 |
cerebellum | 1.05e-15 | 6 |
rhombic lip | 1.05e-15 | 6 |
extraembryonic membrane | 6.07e-15 | 14 |
membranous layer | 6.07e-15 | 14 |
chorion | 1.15e-13 | 7 |
urinary system structure | 7.50e-12 | 47 |
renal system | 1.31e-11 | 48 |
regional part of metencephalon | 8.37e-11 | 9 |
Showing 1 to 10 of 20 entries