FFCP PHASE1:Hg19::chr1:208323145..208323153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:208323145..208323153,- | |||
|coexpression_cluster_id=C1847 | |||
|description=CAGE_peak_at_chr1:208323145..208323153,- | |description=CAGE_peak_at_chr1:208323145..208323153,- | ||
|id=chr1:208323145..208323153,- | |id=chr1:208323145..208323153,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;6.20e-25;3!CL:0000622;2.17e-15;5!CL:0000154;5.42e-13;6!CL:0000150;5.63e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.29e-24,3;CL:0000622,3.35e-15,5;CL:0000154,7.78e-13,6;CL:0000150,7.16e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.55e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.47e-19;1!DOID:3149;2.47e-19;1!DOID:3451;2.37e-10;2!DOID:4159;2.37e-10;2!DOID:0060122;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.68e-23!57;UBERON:0005068!1.68e-23!57;UBERON:0006241!1.68e-23!57;UBERON:0007135!1.68e-23!57;UBERON:0000955!7.46e-23!69;UBERON:0006238!7.46e-23!69;UBERON:0001017!3.96e-21!82;UBERON:0002616!7.78e-21!59;UBERON:0005743!9.85e-21!86;UBERON:0002780!1.20e-19!41;UBERON:0001890!1.20e-19!41;UBERON:0006240!1.20e-19!41;UBERON:0003080!5.41e-19!42;UBERON:0000073!1.32e-18!94;UBERON:0001016!1.32e-18!94;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0001893!4.33e-17!34;UBERON:0002791!3.45e-16!33;UBERON:0001869!2.25e-15!32;UBERON:0007023!3.37e-15!115;UBERON:0003075!4.07e-15!86;UBERON:0007284!4.07e-15!86;UBERON:0002346!5.72e-14!90;UBERON:0000956!2.33e-13!25;UBERON:0000203!2.33e-13!25;UBERON:0000033!1.16e-12!123;UBERON:0002619!2.89e-12!22;UBERON:0000153!3.20e-12!129;UBERON:0007811!3.20e-12!129;UBERON:0001950!4.37e-12!20;UBERON:0003056!1.01e-11!61;UBERON:0004111!5.42e-11!241;UBERON:0000025!5.13e-10!194;UBERON:0000477!5.32e-10!286;UBERON:0004121!2.75e-09!169;UBERON:0000924!8.65e-09!173;UBERON:0006601!8.65e-09!173;UBERON:0002021!4.53e-08!5 | |ontology_enrichment_uberon=UBERON:0001049!1.68e-23!57;UBERON:0005068!1.68e-23!57;UBERON:0006241!1.68e-23!57;UBERON:0007135!1.68e-23!57;UBERON:0000955!7.46e-23!69;UBERON:0006238!7.46e-23!69;UBERON:0001017!3.96e-21!82;UBERON:0002616!7.78e-21!59;UBERON:0005743!9.85e-21!86;UBERON:0002780!1.20e-19!41;UBERON:0001890!1.20e-19!41;UBERON:0006240!1.20e-19!41;UBERON:0003080!5.41e-19!42;UBERON:0000073!1.32e-18!94;UBERON:0001016!1.32e-18!94;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0001893!4.33e-17!34;UBERON:0002791!3.45e-16!33;UBERON:0001869!2.25e-15!32;UBERON:0007023!3.37e-15!115;UBERON:0003075!4.07e-15!86;UBERON:0007284!4.07e-15!86;UBERON:0002346!5.72e-14!90;UBERON:0000956!2.33e-13!25;UBERON:0000203!2.33e-13!25;UBERON:0000033!1.16e-12!123;UBERON:0002619!2.89e-12!22;UBERON:0000153!3.20e-12!129;UBERON:0007811!3.20e-12!129;UBERON:0001950!4.37e-12!20;UBERON:0003056!1.01e-11!61;UBERON:0004111!5.42e-11!241;UBERON:0000025!5.13e-10!194;UBERON:0000477!5.32e-10!286;UBERON:0004121!2.75e-09!169;UBERON:0000924!8.65e-09!173;UBERON:0006601!8.65e-09!173;UBERON:0002021!4.53e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;5.42e-13;6!UBERON:0003293;5.42e-13;6!UBERON:0003294;5.42e-13;6!UBERON:0010047;5.42e-13;6!UBERON:0003408;5.42e-13;6!UBERON:0000167;5.42e-13;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,7.78e-13,6;UBERON:0003293,7.78e-13,6;UBERON:0003294,7.78e-13,6;UBERON:0010047,7.78e-13,6;UBERON:0000167,7.78e-13,6;UBERON:0003408,4.50e-08,10 | |||
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| ||
|short_description=p@chr1:208323145..208323153,- | |short_description=p@chr1:208323145..208323153,- | ||
}} | }} |
Latest revision as of 03:14, 28 July 2015
Short description: | p@chr1:208323145..208323153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:208323145..208323153, - |
Coexpression cluster: | C1847_gastrointestinal_cerebellum_parietal_middle_salivary_acute_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.29e-24 | 3 |
acinar cell | 3.35e-15 | 5 |
protein secreting cell | 7.78e-13 | 6 |
glandular epithelial cell | 7.16e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 7.78e-13 | 6 |
gland of oral region | 7.78e-13 | 6 |
gland of foregut | 7.78e-13 | 6 |
oral gland | 7.78e-13 | 6 |
oral cavity | 7.78e-13 | 6 |
gland of gut | 4.50e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-19 | 1 |
keratoacanthoma | 5.62e-19 | 1 |
skin carcinoma | 3.58e-10 | 2 |
skin cancer | 3.58e-10 | 2 |
integumentary system cancer | 3.58e-10 | 2 |