FFCP PHASE1:Hg19::chr17:39662068..39662109,-: Difference between revisions
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|id=chr17:39662068..39662109,-
|short_description=p12@KRT13
|description=CAGE_peak_12_at_KRT13_5end
|association_with_transcript=-203bp_to_NM_002274,NM_153490,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt=P13646,A1A4E9 | |UniProt=P13646,A1A4E9 | ||
|association_with_transcript=-203bp_to_NM_002274,NM_153490,uc002hwu.1,uc002hwv.1,uc002hwx.1,uc010cxo.2_5end | |||
|cluster_id=chr17:39662068..39662109,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_12_at_KRT13_5end | |||
|id=chr17:39662068..39662109,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-21;1!UBERON:0008814;2.60e-11;2!UBERON:0010056;2.60e-11;2 | |||
|ontology_enrichment_disease=DOID:1749!9.71e-14!14;DOID:3151!5.06e-07!1;DOID:3149!5.06e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!1.43e-19!10;UBERON:0001004!2.20e-14!72;UBERON:0001042!2.75e-14!10;UBERON:0009145!2.75e-14!10;UBERON:0003343!5.27e-13!4;UBERON:0004785!5.27e-13!4;UBERON:0000065!5.42e-13!53;UBERON:0006562!5.74e-13!11;UBERON:0003127!4.15e-12!2;UBERON:0000072!1.46e-10!46;UBERON:0003729!1.66e-10!5;UBERON:0001557!2.68e-10!19;UBERON:0000166!2.79e-09!21;UBERON:0001723!6.67e-09!3;UBERON:0001033!6.67e-09!3;UBERON:0010056!6.67e-09!3;UBERON:0001007!6.72e-09!155;UBERON:0001555!6.72e-09!155;UBERON:0007026!6.72e-09!155;UBERON:0004119!7.09e-09!169;UBERON:0000925!7.09e-09!169;UBERON:0006595!7.09e-09!169;UBERON:0003126!8.71e-08!7;UBERON:0001005!8.71e-08!7;UBERON:0000077!1.03e-07!130;UBERON:0000344!1.16e-07!12;UBERON:0002372!2.66e-07!1;UBERON:0001961!2.66e-07!1;UBERON:0001744!2.66e-07!1;UBERON:0001735!2.66e-07!1;UBERON:0001041!3.46e-07!98;UBERON:0000161!4.84e-07!35;UBERON:0000997!7.15e-07!1;UBERON:0005056!7.15e-07!1;UBERON:0000165!8.24e-07!28;UBERON:0000930!8.24e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.82e-27;3!UBERON:0001033;1.82e-27;3!UBERON:0002372;3.12e-21;1!UBERON:0001961;3.12e-21;1!UBERON:0001744;3.12e-21;1!UBERON:0001042;3.12e-21;1!UBERON:0001735;3.12e-21;1!UBERON:0005795;6.98e-21;1!UBERON:0006562;2.60e-11;2!UBERON:0000341;3.89e-11;2!UBERON:0001043;4.84e-08;3!UBERON:0000165;4.88e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.08e-27,3;UBERON:0001033,2.08e-27,3;UBERON:0010056,2.08e-27,3;UBERON:0002372,3.45e-21,1;UBERON:0001961,3.45e-21,1;UBERON:0001744,3.45e-21,1;UBERON:0001735,3.45e-21,1;UBERON:0001042,1.53e-18,10;UBERON:0009145,1.53e-18,10;UBERON:0006562,6.36e-17,11;UBERON:0000341,3.35e-11,2;UBERON:0001557,4.44e-10,19;UBERON:0000166,8.70e-09,22;UBERON:0001043,4.84e-08,3;UBERON:0009143,4.84e-08,3;UBERON:0000072,4.20e-07,47;UBERON:0000165,8.42e-07,29;UBERON:0000930,8.42e-07,29 | |||
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|short_description=p12@KRT13 | |||
}} | }} |
Latest revision as of 05:43, 20 September 2015
Short description: | p12@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KRT13_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -203bp_to_NM_002274, NM_153490, uc002hwu.1, uc002hwv.1, uc002hwx.1, uc010cxo.2_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | P13646A1A4E9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.08e-27 | 3 |
gustatory system | 2.08e-27 | 3 |
future tongue | 2.08e-27 | 3 |
tonsil | 3.45e-21 | 1 |
mucosa-associated lymphoid tissue | 3.45e-21 | 1 |
lymphoid tissue | 3.45e-21 | 1 |
tonsillar ring | 3.45e-21 | 1 |
chordate pharynx | 1.53e-18 | 10 |
pharyngeal region of foregut | 1.53e-18 | 10 |
pharynx | 6.36e-17 | 11 |
throat | 3.35e-11 | 2 |
upper respiratory tract | 4.44e-10 | 19 |
oral opening | 8.70e-09 | 22 |
esophagus | 4.84e-08 | 3 |
esophageal region | 4.84e-08 | 3 |
segment of respiratory tract | 4.20e-07 | 47 |
mouth | 8.42e-07 | 29 |
stomodeum | 8.42e-07 | 29 |