FFCP PHASE1:Hg19::chr17:39780328..39780347,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39780328..39780347,+
|short_description=p@chr17:39780328..39780347,+
|description=CAGE_peak_at_chr17:39780328..39780347,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39780328..39780347,+ | |||
|coexpression_cluster_id=C544 | |||
|description=CAGE_peak_at_chr17:39780328..39780347,+ | |||
|id=chr17:39780328..39780347,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.11e-27!254;CL:0002076!6.03e-27!43;CL:0002368!3.43e-26!13;CL:0000223!5.63e-18!59;CL:0002202!4.16e-16!9;CL:0002632!4.16e-16!9;CL:0000244!5.65e-12!4;CL:0000731!5.65e-12!4;CL:0002328!2.11e-10!3;CL:0002159!2.60e-10!13;CL:0000068!5.63e-10!3;CL:0000069!5.63e-10!3;CL:0000307!5.63e-10!3;CL:0000377!5.63e-10!3;CL:0000349!6.71e-10!3;CL:0002577!6.71e-10!3;CL:0002251!5.20e-09!21;CL:0000240!3.73e-08!6;CL:0000311!3.73e-08!6;CL:0000079!3.73e-08!6;CL:0000237!3.73e-08!6;CL:0000036!3.73e-08!6;CL:0000357!3.73e-08!6;CL:0000114!3.73e-08!6;CL:0002327!2.03e-07!4;CL:0000575!2.65e-07!2;CL:0000063!5.47e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.82e-44;13!CL:0002076;1.23e-24;42!CL:0002202;2.45e-24;9!CL:0002632;2.45e-24;9!CL:0002328;1.08e-19;3!CL:0000307;7.36e-19;3!CL:0002577;1.34e-18;3!CL:0002327;7.39e-14;4!CL:0000575;2.63e-13;2!CL:0000312;2.37e-11;5!CL:0002159;1.27e-10;14!CL:0000240;1.54e-09;6!CL:0000311;1.54e-09;6!CL:0000079;1.54e-09;6!CL:0000237;1.54e-09;6!CL:0002231;7.72e-09;3!CL:0002252;2.29e-07;1!CL:0000244;4.68e-07;4!CL:0000731;4.68e-07;4!CL:0002077;5.37e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.41e-44,13;CL:0002076,1.47e-32,42;CL:0002202,2.61e-24,9;CL:0002632,2.61e-24,9;CL:0000223,1.18e-22,58;CL:0002328,1.08e-19,3;CL:0000068,8.07e-19,3;CL:0000069,8.07e-19,3;CL:0000307,8.07e-19,3;CL:0000377,8.07e-19,3;CL:0002577,1.16e-18,3;CL:0000066,2.36e-18,253;CL:0002327,5.80e-14,4;CL:0000575,2.40e-13,2;CL:0000312,2.14e-11,5;CL:0002159,1.16e-10,14;CL:0000240,1.41e-09,6;CL:0000311,1.41e-09,6;CL:0000079,1.41e-09,6;CL:0000237,1.41e-09,6;CL:0000036,1.41e-09,6;CL:0000357,1.41e-09,6;CL:0000114,1.41e-09,6;CL:0002231,1.02e-08,3;CL:0002077,8.03e-08,34;CL:0002321,1.07e-07,250;CL:0002252,2.09e-07,1;CL:0000244,4.90e-07,4;CL:0000731,4.90e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;7.36e-19;3!CL:0000223;2.64e-13;58!CL:0000357;1.54e-09;6!CL:0000114;1.54e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!7.77e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.88e-07;1!DOID:3149;4.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.62e-07,1;DOID:3149,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.19e-23!72;UBERON:0001737!9.58e-23!9;UBERON:0000065!3.52e-20!53;UBERON:0008947!2.10e-17!38;UBERON:0003258!2.10e-17!38;UBERON:0004119!2.48e-17!169;UBERON:0000925!2.48e-17!169;UBERON:0006595!2.48e-17!169;UBERON:0000072!2.46e-15!46;UBERON:0005631!1.56e-14!14;UBERON:0000158!1.56e-14!14;UBERON:0000365!5.36e-14!5;UBERON:0001557!4.00e-12!19;UBERON:0001987!6.32e-12!4;UBERON:0004340!6.32e-12!4;UBERON:0005910!1.32e-11!6;UBERON:0000064!1.87e-11!219;UBERON:0004815!2.11e-10!3;UBERON:0002031!2.11e-10!3;UBERON:0007196!6.51e-10!14;UBERON:0001558!6.51e-10!14;UBERON:0003124!6.55e-10!7;UBERON:0000077!1.17e-09!130;UBERON:0003729!1.04e-08!5;UBERON:0002185!7.15e-08!4;UBERON:0000478!9.41e-08!24;UBERON:0001007!1.40e-07!155;UBERON:0001555!1.40e-07!155;UBERON:0007026!1.40e-07!155;UBERON:0000063!1.59e-07!97;UBERON:0001911!2.03e-07!4;UBERON:0005333!2.03e-07!4;UBERON:0008425!2.03e-07!4;UBERON:0005311!2.03e-07!4;UBERON:0001041!2.37e-07!98;UBERON:0004923!3.97e-07!57;UBERON:0003100!4.46e-07!41;UBERON:0000995!5.59e-07!21;UBERON:0000002!6.17e-07!6;UBERON:0001560!6.17e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.08e-19;3!UBERON:0002031;1.08e-19;3!UBERON:0007196;2.21e-14;15!UBERON:0001558;2.21e-14;15!UBERON:0001987;4.34e-14;4!UBERON:0001911;7.39e-14;4!UBERON:0002185;5.07e-12;5!UBERON:0000065;1.23e-10;44!UBERON:0000485;1.03e-08;7!UBERON:0003126;2.30e-08;7!UBERON:0001005;2.30e-08;7!UBERON:0005178;4.44e-08;34!UBERON:0002224;4.44e-08;34!UBERON:0005181;2.26e-07;35!UBERON:0000072;3.16e-07;37!UBERON:0000964;4.54e-07;4!UBERON:0010409;4.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.08e-19,3;UBERON:0002031,1.08e-19,3;UBERON:0007196,2.29e-14,15;UBERON:0001558,2.29e-14,15;UBERON:0001987,3.89e-14,4;UBERON:0004340,3.89e-14,4;UBERON:0001911,5.80e-14,4;UBERON:0005333,5.80e-14,4;UBERON:0008425,5.80e-14,4;UBERON:0005311,5.80e-14,4;UBERON:0004119,3.39e-13,160;UBERON:0000925,3.39e-13,160;UBERON:0006595,3.39e-13,160;UBERON:0001004,9.78e-13,74;UBERON:0002185,5.07e-12,5;UBERON:0000065,2.59e-11,54;UBERON:0005157,4.14e-11,47;UBERON:0005153,2.79e-09,37;UBERON:0003126,2.39e-08,7;UBERON:0001005,2.39e-08,7;UBERON:0003124,2.78e-08,7;UBERON:0005178,5.08e-08,34;UBERON:0002224,5.08e-08,34;UBERON:0005181,9.14e-08,35;UBERON:0000076,3.24e-07,8;UBERON:0000964,4.35e-07,4;UBERON:0010409,4.35e-07,4;UBERON:0004348,4.35e-07,4;UBERON:0005427,4.35e-07,4;UBERON:0008947,5.03e-07,38;UBERON:0003258,5.03e-07,38;UBERON:0005631,6.43e-07,14;UBERON:0000158,6.43e-07,14;UBERON:0000485,7.31e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7107395916628,10.2410012384605,14.4204063965047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.964044119533928,0.441175890929576,0.435758888184812,0.237270619111097,1.48314438976181,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,2.30475599358114,8.99214026060957,1.50793458617446,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.425325291727159,1.70161193135412,2.03443756959773,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57818928615649,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,4.23572549105123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32227932288782,1.53752053892085,1.91419068741876,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23377295992253,6.03272047982209,2.17781969722645,0,0.43050537267123,3.36942951335251,7.09488245658681,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.27373440141111,1.24415452006595,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,1.28400018965175,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24329698497822,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7107395916628,10.2410012384605,14.4204063965047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.964044119533928,0.441175890929576,0.435758888184812,0.237270619111097,1.48314438976181,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,2.30475599358114,8.99214026060957,1.50793458617446,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.425325291727159,1.70161193135412,2.03443756959773,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57818928615649,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,4.23572549105123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32227932288782,1.53752053892085,1.91419068741876,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23377295992253,6.03272047982209,2.17781969722645,0,0.43050537267123,3.36942951335251,7.09488245658681,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.27373440141111,1.24415452006595,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,1.28400018965175,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24329698497822,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:39780328..39780347,+ | |||
}} | }} |
Latest revision as of 16:47, 25 July 2015
Short description: | p@chr17:39780328..39780347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39780328..39780347, + |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.08e-19 | 3 |
epithelium of bronchus | 1.08e-19 | 3 |
tracheobronchial tree | 2.29e-14 | 15 |
lower respiratory tract | 2.29e-14 | 15 |
placenta | 3.89e-14 | 4 |
allantois | 3.89e-14 | 4 |
mammary gland | 5.80e-14 | 4 |
mammary bud | 5.80e-14 | 4 |
mammary ridge | 5.80e-14 | 4 |
mammary placode | 5.80e-14 | 4 |
endoderm-derived structure | 3.39e-13 | 160 |
endoderm | 3.39e-13 | 160 |
presumptive endoderm | 3.39e-13 | 160 |
respiratory system | 9.78e-13 | 74 |
bronchus | 5.07e-12 | 5 |
respiratory tract | 2.59e-11 | 54 |
epithelial fold | 4.14e-11 | 47 |
epithelial bud | 2.79e-09 | 37 |
trachea | 2.39e-08 | 7 |
respiratory airway | 2.39e-08 | 7 |
chorion | 2.78e-08 | 7 |
thoracic cavity element | 5.08e-08 | 34 |
thoracic cavity | 5.08e-08 | 34 |
thoracic segment organ | 9.14e-08 | 35 |
external ectoderm | 3.24e-07 | 8 |
cornea | 4.35e-07 | 4 |
eye surface | 4.35e-07 | 4 |
optic eminence | 4.35e-07 | 4 |
corneal primordium | 4.35e-07 | 4 |
respiratory primordium | 5.03e-07 | 38 |
endoderm of foregut | 5.03e-07 | 38 |
extraembryonic membrane | 6.43e-07 | 14 |
membranous layer | 6.43e-07 | 14 |
simple columnar epithelium | 7.31e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.62e-07 | 1 |
keratoacanthoma | 3.62e-07 | 1 |