FFCP PHASE1:Hg19::chr2:128397880..128397884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55679 | |EntrezGene=55679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |HGNC=16084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_ENST00000494613_5end | |association_with_transcript=93bp_to_ENST00000494613_5end | ||
|cluster_id=chr2:128397880..128397884,- | |||
|description=CAGE_peak_13_at_LIMS2_5end | |description=CAGE_peak_13_at_LIMS2_5end | ||
|id=chr2:128397880..128397884,- | |id=chr2:128397880..128397884,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.94e-13;12!CL:0002580;3.89e-11;3!CL:0002579;1.48e-10;3!CL:0000197;1.37e-09;6!CL:0000098;1.37e-09;6!CL:0002167;1.37e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.71e-13,12;CL:0002579,4.58e-11,3;CL:0002580,4.74e-11,3;CL:0000197,1.25e-09,6;CL:0000098,1.25e-09,6;CL:0002167,1.25e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.97e-08;2!UBERON:0006965;1.37e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.85e-09!115;UBERON:0004457!2.46e-07!12;UBERON:0000042!2.46e-07!12;UBERON:0003688!3.77e-07!6;UBERON:0002358!3.77e-07!6;UBERON:0003684!3.77e-07!6;UBERON:0001178!3.77e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!5.85e-09!115;UBERON:0004457!2.46e-07!12;UBERON:0000042!2.46e-07!12;UBERON:0003688!3.77e-07!6;UBERON:0002358!3.77e-07!6;UBERON:0003684!3.77e-07!6;UBERON:0001178!3.77e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.29e-14;6!UBERON:0002358;2.29e-14;6!UBERON:0003684;2.29e-14;6!UBERON:0001178;2.29e-14;6!UBERON:0004457;2.83e-13;9!UBERON:0000042;2.83e-13;9!UBERON:0005406;8.53e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.25e-15,6;UBERON:0002358,9.25e-15,6;UBERON:0003684,9.25e-15,6;UBERON:0001178,9.25e-15,6;UBERON:0004457,4.34e-10,12;UBERON:0000042,4.34e-10,12;UBERON:0005406,8.90e-09,2 | |||
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| ||
|short_description=p13@LIMS2 | |short_description=p13@LIMS2 | ||
}} | }} |
Latest revision as of 20:53, 16 September 2015
Short description: | p13@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000494613_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.71e-13 | 12 |
omentum preadipocyte | 4.58e-11 | 3 |
preadipocyte of the breast | 4.74e-11 | 3 |
receptor cell | 1.25e-09 | 6 |
sensory epithelial cell | 1.25e-09 | 6 |
olfactory epithelial cell | 1.25e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.25e-15 | 6 |
peritoneum | 9.25e-15 | 6 |
abdominal cavity | 9.25e-15 | 6 |
visceral peritoneum | 9.25e-15 | 6 |
cavity lining | 4.34e-10 | 12 |
serous membrane | 4.34e-10 | 12 |
perirenal fat | 8.90e-09 | 2 |