FFCP PHASE1:Hg19::chr3:30226342..30226387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:30226342..30226387,- | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_at_chr3:30226342..30226387,- | |description=CAGE_peak_at_chr3:30226342..30226387,- | ||
|id=chr3:30226342..30226387,- | |id=chr3:30226342..30226387,- | ||
|ontology_enrichment_celltype=CL:0000569!1.36e-20!4;CL:0000011!1.36e-20!4;CL:0002494!6.99e-11!16;CL:0002595!3.67e-10!5 | |ontology_enrichment_celltype=CL:0000569!1.36e-20!4;CL:0000011!1.36e-20!4;CL:0002494!6.99e-11!16;CL:0002595!3.67e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002589;7.67e-18;2!CL:0000243;1.00e-08;15!CL:0000125;1.00e-08;15!CL:0002595;5.73e-08;5!CL:0000095;6.59e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,7.67e-18,2;CL:0000243,1.00e-08,15;CL:0000125,1.00e-08,15;CL:0000030,1.00e-08,15;CL:0000339,1.00e-08,15;CL:0002595,5.73e-08,5;CL:0000095,6.59e-08,17;CL:0000123,6.59e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.11e-13;10!CL:0000339;1.00e-08;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;6.00e-12;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.00e-12,11 | |||
|ontology_enrichment_uberon=UBERON:0003834!3.67e-10!5;UBERON:0001533!3.67e-10!5;UBERON:0003914!1.32e-07!118;UBERON:0004872!1.37e-07!84;UBERON:0000948!4.70e-07!24;UBERON:0005498!4.70e-07!24;UBERON:0004140!4.70e-07!24;UBERON:0009881!4.70e-07!24;UBERON:0004141!4.70e-07!24;UBERON:0003084!4.70e-07!24;UBERON:0007005!4.70e-07!24;UBERON:0004139!4.70e-07!24;UBERON:0004291!4.70e-07!24;UBERON:0004573!8.56e-07!33;UBERON:0004571!8.56e-07!33 | |ontology_enrichment_uberon=UBERON:0003834!3.67e-10!5;UBERON:0001533!3.67e-10!5;UBERON:0003914!1.32e-07!118;UBERON:0004872!1.37e-07!84;UBERON:0000948!4.70e-07!24;UBERON:0005498!4.70e-07!24;UBERON:0004140!4.70e-07!24;UBERON:0009881!4.70e-07!24;UBERON:0004141!4.70e-07!24;UBERON:0003084!4.70e-07!24;UBERON:0007005!4.70e-07!24;UBERON:0004139!4.70e-07!24;UBERON:0004291!4.70e-07!24;UBERON:0004573!8.56e-07!33;UBERON:0004571!8.56e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001529;7.67e-18;2!UBERON:0007204;7.67e-18;2!UBERON:0003834;5.73e-08;5!UBERON:0001533;5.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,7.67e-18,2;UBERON:0007204,7.67e-18,2;UBERON:0003834,5.73e-08,5;UBERON:0001533,5.73e-08,5 | |||
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|short_description=p@chr3:30226342..30226387,- | |short_description=p@chr3:30226342..30226387,- | ||
}} | }} |
Latest revision as of 20:21, 29 July 2015
Short description: | p@chr3:30226342..30226387, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:30226342..30226387, - |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 7.67e-18 | 2 |
glial cell (sensu Vertebrata) | 1.00e-08 | 15 |
glial cell | 1.00e-08 | 15 |
glioblast | 1.00e-08 | 15 |
glioblast (sensu Vertebrata) | 1.00e-08 | 15 |
smooth muscle cell of the subclavian artery | 5.73e-08 | 5 |
neuron associated cell | 6.59e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.59e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 7.67e-18 | 2 |
brachiocephalic vasculature | 7.67e-18 | 2 |
thoracic segment blood vessel | 5.73e-08 | 5 |
subclavian artery | 5.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.00e-12 | 11 |