FFCP PHASE1:Hg19::chr10:104215864..104215874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104215864..104215874,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:104215864..104215874,+ | |description=CAGE_peak_at_chr10:104215864..104215874,+ | ||
|id=chr10:104215864..104215874,+ | |id=chr10:104215864..104215874,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.40e-51!42;CL:0000860!2.08e-50!45;CL:0002194!8.31e-33!63;CL:0000576!8.31e-33!63;CL:0000040!8.31e-33!63;CL:0000559!8.31e-33!63;CL:0000766!2.56e-32!76;CL:0002009!1.51e-31!65;CL:0000839!1.04e-28!70;CL:0000557!3.43e-28!71;CL:0000763!4.85e-19!112;CL:0000049!4.85e-19!112;CL:0002087!1.19e-14!119;CL:0000738!1.74e-14!140;CL:0002031!1.02e-12!124;CL:0000037!3.50e-10!172;CL:0000566!3.50e-10!172;CL:0002032!3.57e-10!165;CL:0000837!3.57e-10!165;CL:0000767!1.18e-09!3;CL:0000988!3.63e-09!182 | |ontology_enrichment_celltype=CL:0002057!3.40e-51!42;CL:0000860!2.08e-50!45;CL:0002194!8.31e-33!63;CL:0000576!8.31e-33!63;CL:0000040!8.31e-33!63;CL:0000559!8.31e-33!63;CL:0000766!2.56e-32!76;CL:0002009!1.51e-31!65;CL:0000839!1.04e-28!70;CL:0000557!3.43e-28!71;CL:0000763!4.85e-19!112;CL:0000049!4.85e-19!112;CL:0002087!1.19e-14!119;CL:0000738!1.74e-14!140;CL:0002031!1.02e-12!124;CL:0000037!3.50e-10!172;CL:0000566!3.50e-10!172;CL:0002032!3.57e-10!165;CL:0000837!3.57e-10!165;CL:0000767!1.18e-09!3;CL:0000988!3.63e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-68;33!CL:0002057;3.63e-68;33!CL:0000473;2.02e-53;39!CL:0000234;2.02e-53;39!CL:0000576;4.94e-37;48!CL:0000767;3.19e-26;3!CL:0000766;3.04e-23;69!CL:0000763;2.03e-10;100!CL:0000094;3.28e-10;8!CL:0002087;6.77e-08;104!CL:0000081;1.46e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.35e-64,42;CL:0002057,3.35e-64,42;CL:0000473,7.84e-56,48;CL:0000234,7.84e-56,48;CL:0000766,2.79e-49,72;CL:0002194,4.16e-44,59;CL:0000576,4.16e-44,59;CL:0000040,4.16e-44,59;CL:0000559,4.16e-44,59;CL:0002009,1.36e-42,61;CL:0000839,3.33e-39,66;CL:0000557,1.38e-38,67;CL:0000763,5.46e-32,108;CL:0000049,5.46e-32,108;CL:0000767,3.20e-26,3;CL:0000738,8.33e-25,136;CL:0002087,2.05e-21,115;CL:0002032,1.76e-20,161;CL:0000837,1.76e-20,161;CL:0002031,2.09e-20,120;CL:0000037,1.69e-19,168;CL:0000988,2.39e-18,177;CL:0000094,3.28e-10,8;CL:0000134,1.56e-08,354;CL:0002320,2.67e-08,361;CL:0000081,1.46e-07,11;CL:0000219,1.79e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.70e-51;42!CL:0000049;2.31e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.22e-24!80;UBERON:0001474!7.51e-22!86;UBERON:0002390!8.57e-20!102;UBERON:0003061!8.57e-20!102;UBERON:0004765!9.18e-19!101;UBERON:0001434!9.18e-19!101;UBERON:0002193!1.19e-18!112;UBERON:0002405!6.07e-18!115;UBERON:0002204!2.10e-11!167;UBERON:0000926!3.13e-07!448;UBERON:0004120!3.13e-07!448;UBERON:0006603!3.13e-07!448;UBERON:0003081!7.44e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!4.22e-24!80;UBERON:0001474!7.51e-22!86;UBERON:0002390!8.57e-20!102;UBERON:0003061!8.57e-20!102;UBERON:0004765!9.18e-19!101;UBERON:0001434!9.18e-19!101;UBERON:0002193!1.19e-18!112;UBERON:0002405!6.07e-18!115;UBERON:0002204!2.10e-11!167;UBERON:0000926!3.13e-07!448;UBERON:0004120!3.13e-07!448;UBERON:0006603!3.13e-07!448;UBERON:0003081!7.44e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.67e-34,76;UBERON:0001474,4.29e-31,82;UBERON:0004765,4.18e-28,90;UBERON:0002405,4.09e-27,93;UBERON:0002390,1.34e-25,98;UBERON:0003061,1.34e-25,98;UBERON:0001434,4.94e-25,100;UBERON:0002193,5.58e-23,108;UBERON:0002204,7.46e-14,167;UBERON:0003081,7.24e-11,203;UBERON:0002384,5.58e-08,371;UBERON:0000926,8.02e-07,315;UBERON:0004120,8.02e-07,315;UBERON:0006603,8.02e-07,315 | |||
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|phase1_expression=0,0,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,2.47705797305722,0,0,0.369754010166788,0,0,0,1.10799081706375,0.802177789880567,0.651032612147555,0,0,0,0.872389432677388,0.755751887377619,1.21292030593908,5.81072592264212,2.87817521615278,5.57471467611186,2.3015391385772,1.2808035326455,1.89185783910868,3.7922024881028,5.16387746867061,5.41705946377367,3.20011977222428,0.545812300115692,2.24723484445085,1.22433556948361,0.320929027076094,0,0,0.398927315243264,0.426224750532694,1.7412554317715,0.56738522469114,0,2.51248665256743,2.08593167368081,3.9093992046921,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:104215864..104215874,+ | |short_description=p@chr10:104215864..104215874,+ | ||
}} | }} |
Latest revision as of 09:49, 23 July 2015
Short description: | p@chr10:104215864..104215874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104215864..104215874, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.35e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.35e-64 | 42 |
defensive cell | 7.84e-56 | 48 |
phagocyte | 7.84e-56 | 48 |
myeloid leukocyte | 2.79e-49 | 72 |
monopoietic cell | 4.16e-44 | 59 |
monocyte | 4.16e-44 | 59 |
monoblast | 4.16e-44 | 59 |
promonocyte | 4.16e-44 | 59 |
macrophage dendritic cell progenitor | 1.36e-42 | 61 |
myeloid lineage restricted progenitor cell | 3.33e-39 | 66 |
granulocyte monocyte progenitor cell | 1.38e-38 | 67 |
myeloid cell | 5.46e-32 | 108 |
common myeloid progenitor | 5.46e-32 | 108 |
basophil | 3.20e-26 | 3 |
leukocyte | 8.33e-25 | 136 |
nongranular leukocyte | 2.05e-21 | 115 |
hematopoietic oligopotent progenitor cell | 1.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 2.09e-20 | 120 |
hematopoietic stem cell | 1.69e-19 | 168 |
hematopoietic cell | 2.39e-18 | 177 |
granulocyte | 3.28e-10 | 8 |
mesenchymal cell | 1.56e-08 | 354 |
connective tissue cell | 2.67e-08 | 361 |
blood cell | 1.46e-07 | 11 |
motile cell | 1.79e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.67e-34 | 76 |
bone element | 4.29e-31 | 82 |
skeletal element | 4.18e-28 | 90 |
immune system | 4.09e-27 | 93 |
hematopoietic system | 1.34e-25 | 98 |
blood island | 1.34e-25 | 98 |
skeletal system | 4.94e-25 | 100 |
hemolymphoid system | 5.58e-23 | 108 |
musculoskeletal system | 7.46e-14 | 167 |
lateral plate mesoderm | 7.24e-11 | 203 |
connective tissue | 5.58e-08 | 371 |
mesoderm | 8.02e-07 | 315 |
mesoderm-derived structure | 8.02e-07 | 315 |
presumptive mesoderm | 8.02e-07 | 315 |