FFCP PHASE1:Hg19::chr10:30248064..30248069,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30248064..30248069,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:30248064..30248069,+ | |description=CAGE_peak_at_chr10:30248064..30248069,+ | ||
|id=chr10:30248064..30248069,+ | |id=chr10:30248064..30248069,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.30e-14!12;CL:0000417!2.30e-14!12;CL:0000668!2.30e-14!12;CL:0000414!2.30e-14!12;CL:0000412!2.30e-14!12;CL:0000182!2.30e-14!12;CL:0000223!9.12e-08!59;CL:0000064!3.16e-07!3;CL:0005012!3.16e-07!3;CL:0000067!3.16e-07!3;CL:0002304!3.16e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.30e-14!12;CL:0000417!2.30e-14!12;CL:0000668!2.30e-14!12;CL:0000414!2.30e-14!12;CL:0000412!2.30e-14!12;CL:0000182!2.30e-14!12;CL:0000223!9.12e-08!59;CL:0000064!3.16e-07!3;CL:0005012!3.16e-07!3;CL:0000067!3.16e-07!3;CL:0002304!3.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-10;11!UBERON:0009497;5.28e-09;13 | |||
|ontology_enrichment_disease=DOID:0050619!1.88e-19!1;DOID:1357!1.88e-19!1;DOID:2355!5.62e-19!1;DOID:4074!2.49e-10!2;DOID:4905!2.49e-10!2;DOID:3498!2.49e-10!2;DOID:74!3.58e-10!2 | |ontology_enrichment_disease=DOID:0050619!1.88e-19!1;DOID:1357!1.88e-19!1;DOID:2355!5.62e-19!1;DOID:4074!2.49e-10!2;DOID:4905!2.49e-10!2;DOID:3498!2.49e-10!2;DOID:74!3.58e-10!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001764!1.88e-19!1;UBERON:0001825!1.88e-19!1;UBERON:0002107!8.80e-16!19;UBERON:0006925!8.80e-16!19;UBERON:0008836!8.80e-16!19;UBERON:0008835!1.11e-13!22;UBERON:0003894!1.11e-13!22;UBERON:0009854!4.20e-13!23;UBERON:0007499!4.40e-12!25;UBERON:0009497!4.40e-12!25;UBERON:0000015!4.40e-12!25;UBERON:0002423!4.40e-12!25;UBERON:0006235!4.40e-12!25;UBERON:0004161!4.40e-12!25;UBERON:0005057!1.25e-11!26;UBERON:0009856!1.25e-11!26;UBERON:0000949!3.11e-10!45;UBERON:0002365!8.32e-10!31;UBERON:0002330!8.32e-10!31;UBERON:0002368!1.02e-08!35;UBERON:0001896!2.97e-07!3;UBERON:0005290!2.97e-07!3;UBERON:0010096!2.97e-07!3;UBERON:0001778!3.16e-07!3;UBERON:0001775!3.16e-07!3 | |ontology_enrichment_uberon=UBERON:0001764!1.88e-19!1;UBERON:0001825!1.88e-19!1;UBERON:0002107!8.80e-16!19;UBERON:0006925!8.80e-16!19;UBERON:0008836!8.80e-16!19;UBERON:0008835!1.11e-13!22;UBERON:0003894!1.11e-13!22;UBERON:0009854!4.20e-13!23;UBERON:0007499!4.40e-12!25;UBERON:0009497!4.40e-12!25;UBERON:0000015!4.40e-12!25;UBERON:0002423!4.40e-12!25;UBERON:0006235!4.40e-12!25;UBERON:0004161!4.40e-12!25;UBERON:0005057!1.25e-11!26;UBERON:0009856!1.25e-11!26;UBERON:0000949!3.11e-10!45;UBERON:0002365!8.32e-10!31;UBERON:0002330!8.32e-10!31;UBERON:0002368!1.02e-08!35;UBERON:0001896!2.97e-07!3;UBERON:0005290!2.97e-07!3;UBERON:0010096!2.97e-07!3;UBERON:0001778!3.16e-07!3;UBERON:0001775!3.16e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.37e-22;19!UBERON:0006925;5.37e-22;19!UBERON:0002423;4.64e-17;25!UBERON:0002365;1.90e-14;31!UBERON:0002330;1.90e-14;31!UBERON:0002368;1.65e-10;33!UBERON:0000949;1.59e-09;43!UBERON:0005172;3.55e-08;52!UBERON:0005173;3.55e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.37e-22,19;UBERON:0006925,5.37e-22,19;UBERON:0008836,5.37e-22,19;UBERON:0008835,3.41e-19,22;UBERON:0003894,3.41e-19,22;UBERON:0009854,2.02e-18,23;UBERON:0007499,4.64e-17,25;UBERON:0009497,4.64e-17,25;UBERON:0000015,4.64e-17,25;UBERON:0002423,4.64e-17,25;UBERON:0006235,4.64e-17,25;UBERON:0004161,4.64e-17,25;UBERON:0009856,1.86e-16,26;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60 | |||
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|short_description=p@chr10:30248064..30248069,+ | |short_description=p@chr10:30248064..30248069,+ | ||
}} | }} |
Latest revision as of 13:05, 23 July 2015
Short description: | p@chr10:30248064..30248069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30248064..30248069, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.37e-22 | 19 |
digestive gland | 5.37e-22 | 19 |
liver bud | 5.37e-22 | 19 |
hepatic diverticulum | 3.41e-19 | 22 |
liver primordium | 3.41e-19 | 22 |
digestive tract diverticulum | 2.02e-18 | 23 |
epithelial sac | 4.64e-17 | 25 |
epithelium of foregut-midgut junction | 4.64e-17 | 25 |
anatomical boundary | 4.64e-17 | 25 |
hepatobiliary system | 4.64e-17 | 25 |
foregut-midgut junction | 4.64e-17 | 25 |
septum transversum | 4.64e-17 | 25 |
sac | 1.86e-16 | 26 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gut epithelium | 1.34e-08 | 54 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |