FFCP PHASE1:Hg19::chr17:43239231..43239297,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:43239231..43239297,+
|short_description=p1@HEXIM2
|description=CAGE_peak_1_at_HEXIM2_5end
|association_with_transcript=0bp_to_uc002iii.1,uc002iij.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124790 | |EntrezGene=124790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28591 | |HGNC=28591 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002iii.1,uc002iij.1_5end | |||
|cluster_id=chr17:43239231..43239297,+ | |||
|description=CAGE_peak_1_at_HEXIM2_5end | |||
|id=chr17:43239231..43239297,+ | |||
|ontology_enrichment_celltype=CL:0000333!6.41e-09!41;CL:0000133!1.70e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,6.55e-09,41;CL:0000133,1.72e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.21e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.03e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!8.44e-14!347;UBERON:0005743!3.01e-13!86;UBERON:0000073!3.84e-13!94;UBERON:0001016!3.84e-13!94;UBERON:0001017!2.68e-12!82;UBERON:0002346!1.79e-11!90;UBERON:0000955!2.69e-11!69;UBERON:0006238!2.69e-11!69;UBERON:0000924!7.33e-11!173;UBERON:0006601!7.33e-11!173;UBERON:0001049!1.53e-10!57;UBERON:0005068!1.53e-10!57;UBERON:0006241!1.53e-10!57;UBERON:0007135!1.53e-10!57;UBERON:0000475!1.61e-10!365;UBERON:0003075!3.09e-10!86;UBERON:0007284!3.09e-10!86;UBERON:0004121!7.83e-10!169;UBERON:0000064!8.57e-10!219;UBERON:0000483!9.90e-10!309;UBERON:0000119!1.02e-09!312;UBERON:0003056!1.06e-09!61;UBERON:0002780!6.48e-09!41;UBERON:0001890!6.48e-09!41;UBERON:0006240!6.48e-09!41;UBERON:0002616!8.45e-09!59;UBERON:0000033!1.34e-08!123;UBERON:0000922!2.62e-08!612;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0003080!3.18e-08!42;UBERON:0001893!8.70e-08!34;UBERON:0002020!1.26e-07!34;UBERON:0003528!1.26e-07!34;UBERON:0002791!1.78e-07!33;UBERON:0001869!2.16e-07!32;UBERON:0000025!7.98e-07!194;UBERON:0000477!8.07e-07!286;UBERON:0002050!8.55e-07!605;UBERON:0005423!8.55e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.76e-15,223;UBERON:0001017,6.24e-13,81;UBERON:0001016,7.76e-13,89;UBERON:0002346,2.72e-12,86;UBERON:0004121,4.08e-12,171;UBERON:0000924,4.08e-12,171;UBERON:0006601,4.08e-12,171;UBERON:0000955,5.93e-12,68;UBERON:0006238,5.93e-12,68;UBERON:0001049,3.02e-11,56;UBERON:0005068,3.02e-11,56;UBERON:0006241,3.02e-11,56;UBERON:0007135,3.02e-11,56;UBERON:0003075,5.27e-11,82;UBERON:0007284,5.27e-11,82;UBERON:0000073,7.30e-11,53;UBERON:0002616,7.30e-11,53;UBERON:0000483,2.97e-10,306;UBERON:0000119,3.07e-10,309;UBERON:0003056,1.12e-09,61;UBERON:0010371,1.23e-09,104;UBERON:0002780,6.23e-09,41;UBERON:0001890,6.23e-09,41;UBERON:0003080,6.23e-09,41;UBERON:0006240,6.23e-09,41;UBERON:0000922,6.80e-08,592;UBERON:0001893,8.41e-08,34;UBERON:0003528,1.22e-07,34;UBERON:0002020,1.22e-07,34;UBERON:0010314,1.50e-07,132;UBERON:0002791,1.98e-07,32;UBERON:0001869,2.09e-07,32;UBERON:0000025,6.04e-07,192 | |||
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| ||
|short_description=p1@HEXIM2 | |||
}} | }} |
Latest revision as of 00:50, 25 September 2015
Short description: | p1@HEXIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HEXIM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002iii.1, uc002iij.1_5end |
EntrezGene: | HEXIM2 |
HGNC: | 28591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 6.55e-09 | 41 |
neurectodermal cell | 1.72e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.76e-15 | 223 |
central nervous system | 6.24e-13 | 81 |
nervous system | 7.76e-13 | 89 |
neurectoderm | 2.72e-12 | 86 |
ectoderm-derived structure | 4.08e-12 | 171 |
ectoderm | 4.08e-12 | 171 |
presumptive ectoderm | 4.08e-12 | 171 |
brain | 5.93e-12 | 68 |
future brain | 5.93e-12 | 68 |
neural tube | 3.02e-11 | 56 |
neural rod | 3.02e-11 | 56 |
future spinal cord | 3.02e-11 | 56 |
neural keel | 3.02e-11 | 56 |
neural plate | 5.27e-11 | 82 |
presumptive neural plate | 5.27e-11 | 82 |
regional part of nervous system | 7.30e-11 | 53 |
regional part of brain | 7.30e-11 | 53 |
epithelium | 2.97e-10 | 306 |
cell layer | 3.07e-10 | 309 |
pre-chordal neural plate | 1.12e-09 | 61 |
ecto-epithelium | 1.23e-09 | 104 |
regional part of forebrain | 6.23e-09 | 41 |
forebrain | 6.23e-09 | 41 |
anterior neural tube | 6.23e-09 | 41 |
future forebrain | 6.23e-09 | 41 |
embryo | 6.80e-08 | 592 |
telencephalon | 8.41e-08 | 34 |
brain grey matter | 1.22e-07 | 34 |
gray matter | 1.22e-07 | 34 |
structure with developmental contribution from neural crest | 1.50e-07 | 132 |
regional part of telencephalon | 1.98e-07 | 32 |
cerebral hemisphere | 2.09e-07 | 32 |
tube | 6.04e-07 | 192 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.03e-09 | 143 |