FFCP PHASE1:Hg19::chr17:46178353..46178376,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:46178353..46178376,-
|short_description=p6@CBX1
|description=CAGE_peak_6_at_CBX1_5end
|association_with_transcript=183bp_to_ENST00000393408,NM_006807,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10951 | |EntrezGene=10951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1551 | |HGNC=1551 | ||
|TSSclassifier=strong | |||
|UniProt=P83916,Q6IBN6 | |UniProt=P83916,Q6IBN6 | ||
|association_with_transcript=183bp_to_ENST00000393408,NM_006807,uc002ind.3_5end | |||
|cluster_id=chr17:46178353..46178376,- | |||
|description=CAGE_peak_6_at_CBX1_5end | |||
|id=chr17:46178353..46178376,- | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-13!180;CL:0000057!7.84e-09!75;CL:0000077!2.89e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.01e-09;19!CL:0000327;1.80e-08;15!CL:0000153;3.88e-07;9!CL:0000447;3.88e-07;9!CL:0000499;9.76e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.27e-10,19;CL:0000327,3.29e-08,15;CL:0000057,3.75e-07,76;CL:0000153,4.52e-07,9;CL:0000447,4.52e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.22e-11!365;UBERON:0000119!1.88e-08!312;UBERON:0000483!4.54e-08!309 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@CBX1 | |||
}} | }} |
Latest revision as of 05:24, 25 September 2015
Short description: | p6@CBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 183bp_to_ENST00000393408, NM_006807, uc002ind.3_5end |
EntrezGene: | CBX1 |
HGNC: | 1551 |
UniProt: | P83916Q6IBN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.27e-10 | 19 |
extracellular matrix secreting cell | 3.29e-08 | 15 |
fibroblast | 3.75e-07 | 76 |
GAG secreting cell | 4.52e-07 | 9 |
carbohydrate secreting cell | 4.52e-07 | 9 |