FFCP PHASE1:Hg19::chr15:42694573..42694641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=P20807,Q9BQC8 | |UniProt=P20807,Q9BQC8 | ||
|association_with_transcript=0bp_to_ENST00000397200,ENST00000466222,NM_173088,uc001zpq.1_5end | |association_with_transcript=0bp_to_ENST00000397200,ENST00000466222,NM_173088,uc001zpq.1_5end | ||
|cluster_id=chr15:42694573..42694641,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_7_at_CAPN3_5end | |description=CAGE_peak_7_at_CAPN3_5end | ||
|id=chr15:42694573..42694641,+ | |id=chr15:42694573..42694641,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.63e-12!10;CL:0000541!1.63e-12!10;CL:0002567!1.49e-11!3;CL:0000623!8.81e-11!3;CL:0000825!8.81e-11!3;CL:0000147!1.06e-08!14 | |ontology_enrichment_celltype=CL:0000148!1.63e-12!10;CL:0000541!1.63e-12!10;CL:0002567!1.49e-11!3;CL:0000623!8.81e-11!3;CL:0000825!8.81e-11!3;CL:0000147!1.06e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.60e-55;10!CL:0002567;7.56e-47;3!CL:0000147;1.62e-39;14!CL:0000710;1.19e-27;20!CL:0000075;1.86e-20;27!CL:0002566;6.47e-17;1!CL:0002077;8.03e-14;34!CL:0002600;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.61e-55,10;CL:0000541,2.61e-55,10;CL:0002567,7.56e-47,3;CL:0000147,1.62e-39,14;CL:0000710,1.19e-27,20;CL:0000075,1.86e-20,27;CL:0002566,6.47e-17,1;CL:0002077,3.27e-16,34;CL:0000333,8.90e-13,41;CL:0000133,6.24e-09,59;CL:0002600,6.42e-09,2;CL:0000221,2.61e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.49e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!2.95e-09!22;UBERON:0001869!6.07e-09!32;UBERON:0007023!1.28e-08!115;UBERON:0001893!2.62e-08!34;UBERON:0001950!3.75e-08!20;UBERON:0000956!5.28e-08!25;UBERON:0000203!5.28e-08!25;UBERON:0003408!1.14e-07!10;UBERON:0002370!2.97e-07!4;UBERON:0005058!2.97e-07!4;UBERON:0009113!2.97e-07!4;UBERON:0003295!2.97e-07!4;UBERON:0005562!2.97e-07!4;UBERON:0002791!4.09e-07!33;UBERON:0004177!6.72e-07!7;UBERON:0002020!7.36e-07!34;UBERON:0003528!7.36e-07!34 | |ontology_enrichment_uberon=UBERON:0002619!2.95e-09!22;UBERON:0001869!6.07e-09!32;UBERON:0007023!1.28e-08!115;UBERON:0001893!2.62e-08!34;UBERON:0001950!3.75e-08!20;UBERON:0000956!5.28e-08!25;UBERON:0000203!5.28e-08!25;UBERON:0003408!1.14e-07!10;UBERON:0002370!2.97e-07!4;UBERON:0005058!2.97e-07!4;UBERON:0009113!2.97e-07!4;UBERON:0003295!2.97e-07!4;UBERON:0005562!2.97e-07!4;UBERON:0002791!4.09e-07!33;UBERON:0004177!6.72e-07!7;UBERON:0002020!7.36e-07!34;UBERON:0003528!7.36e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.21e-16;1!UBERON:0007029;2.25e-16;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.21e-16,1;UBERON:0007029,2.25e-16,1 | |||
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| ||
|short_description=p7@CAPN3 | |short_description=p7@CAPN3 | ||
}} | }} |
Latest revision as of 15:59, 17 September 2015
Short description: | p7@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAPN3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_ENST00000397200, ENST00000466222, NM_173088, uc001zpq.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | P20807Q9BQC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.61e-55 | 10 |
melanoblast | 2.61e-55 | 10 |
light melanocyte | 7.56e-47 | 3 |
pigment cell | 1.62e-39 | 14 |
neurecto-epithelial cell | 1.19e-27 | 20 |
columnar/cuboidal epithelial cell | 1.86e-20 | 27 |
dark melanocyte | 6.47e-17 | 1 |
ecto-epithelial cell | 3.27e-16 | 34 |
migratory neural crest cell | 8.90e-13 | 41 |
neurectodermal cell | 6.24e-09 | 59 |
smooth muscle cell of trachea | 6.42e-09 | 2 |
ectodermal cell | 2.61e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.21e-16 | 1 |
surface | 2.25e-16 | 1 |