FFCP PHASE1:Hg19::chr17:19702846..19702866,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:19702846..19702866,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chr17:19702846..19702866,- | |description=CAGE_peak_at_chr17:19702846..19702866,- | ||
|id=chr17:19702846..19702866,- | |id=chr17:19702846..19702866,- | ||
|ontology_enrichment_celltype=CL:0002621!1.42e-13!3;CL:0000317!5.29e-10!2;CL:1000448!5.29e-10!2;CL:0002308!5.29e-10!2;CL:0002140!5.29e-10!2;CL:0000362!5.74e-09!8;CL:0002159!3.18e-08!13;CL:0002328!8.49e-07!3 | |ontology_enrichment_celltype=CL:0002621!1.42e-13!3;CL:0000317!5.29e-10!2;CL:1000448!5.29e-10!2;CL:0002308!5.29e-10!2;CL:0002140!5.29e-10!2;CL:0000362!5.74e-09!8;CL:0002159!3.18e-08!13;CL:0002328!8.49e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000317;3.49e-79;2!CL:1000448;3.49e-79;2!CL:0002308;3.49e-79;2!CL:0002140;3.49e-79;2!CL:0000362;3.32e-40;9!CL:0000622;1.70e-32;5!CL:0000154;2.72e-27;6!CL:0002159;3.17e-26;14!CL:0000150;1.35e-18;9!CL:0002231;1.60e-14;3!CL:0002621;2.09e-14;3!CL:0002077;8.41e-11;34!CL:0000312;2.53e-09;5!CL:0000240;5.54e-08;6!CL:0000311;5.54e-08;6!CL:0000079;5.54e-08;6!CL:0000237;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,3.49e-79,2;CL:1000448,3.49e-79,2;CL:0002308,3.49e-79,2;CL:0002140,3.49e-79,2;CL:0000362,3.32e-40,9;CL:0000622,1.70e-32,5;CL:0000154,2.72e-27,6;CL:0002159,3.17e-26,14;CL:0000150,1.35e-18,9;CL:0002231,1.60e-14,3;CL:0002621,2.09e-14,3;CL:0002077,2.48e-11,34;CL:0000312,2.53e-09,5;CL:0000240,5.54e-08,6;CL:0000311,5.54e-08,6;CL:0000079,5.54e-08,6;CL:0000237,5.54e-08,6;CL:0000036,5.54e-08,6;CL:0000357,5.54e-08,6;CL:0000114,5.54e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;5.54e-08;6!CL:0000114;5.54e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.42e-13!3;UBERON:0002419!5.29e-10!2;UBERON:0007771!5.29e-10!2;UBERON:0003297!5.29e-10!2;UBERON:0001821!5.29e-10!2;UBERON:0003487!5.29e-10!2;UBERON:0001820!5.29e-10!2;UBERON:0005089!5.29e-10!2;UBERON:0005088!5.29e-10!2;UBERON:0004815!8.49e-07!3;UBERON:0002031!8.49e-07!3 | |ontology_enrichment_uberon=UBERON:0001949!1.42e-13!3;UBERON:0002419!5.29e-10!2;UBERON:0007771!5.29e-10!2;UBERON:0003297!5.29e-10!2;UBERON:0001821!5.29e-10!2;UBERON:0003487!5.29e-10!2;UBERON:0001820!5.29e-10!2;UBERON:0005089!5.29e-10!2;UBERON:0005088!5.29e-10!2;UBERON:0004815!8.49e-07!3;UBERON:0002031!8.49e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.49e-79;2!UBERON:0007771;3.49e-79;2!UBERON:0003297;3.49e-79;2!UBERON:0001821;3.49e-79;2!UBERON:0003487;3.49e-79;2!UBERON:0001820;3.49e-79;2!UBERON:0001003;1.52e-24;15!UBERON:0007376;1.52e-24;15!UBERON:0010371;7.82e-21;31!UBERON:0001949;2.09e-14;3!UBERON:0002097;3.91e-09;41!UBERON:0003929;6.39e-07;7!UBERON:0002199;6.43e-07;46!UBERON:0002416;6.43e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,3.49e-79,2;UBERON:0007771,3.49e-79,2;UBERON:0003297,3.49e-79,2;UBERON:0001821,3.49e-79,2;UBERON:0003487,3.49e-79,2;UBERON:0001820,3.49e-79,2;UBERON:0005089,3.49e-79,2;UBERON:0005088,3.49e-79,2;UBERON:0001003,1.52e-24,15;UBERON:0007376,1.52e-24,15;UBERON:0007383,1.52e-24,15;UBERON:0001949,2.09e-14,3;UBERON:0003102,1.23e-10,99;UBERON:0002097,1.56e-09,41;UBERON:0002199,1.40e-08,46;UBERON:0002416,1.40e-08,46;UBERON:0002530,7.84e-07,59 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91426798074341,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.708875486211932,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,4.21063587636898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,5.16838984196555,2.60024098414608,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91426798074341,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.708875486211932,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,4.21063587636898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,5.16838984196555,2.60024098414608,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p@chr17:19702846..19702866,- | |short_description=p@chr17:19702846..19702866,- | ||
}} | }} |
Latest revision as of 14:35, 25 July 2015
Short description: | p@chr17:19702846..19702866, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:19702846..19702866, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 3.49e-79 | 2 |
epithelial cell of sweat gland | 3.49e-79 | 2 |
epithelial cell of skin gland | 3.49e-79 | 2 |
acinar cell of sebaceous gland | 3.49e-79 | 2 |
epidermal cell | 3.32e-40 | 9 |
acinar cell | 1.70e-32 | 5 |
protein secreting cell | 2.72e-27 | 6 |
general ecto-epithelial cell | 3.17e-26 | 14 |
glandular epithelial cell | 1.35e-18 | 9 |
epithelial cell of prostate | 1.60e-14 | 3 |
gingival epithelial cell | 2.09e-14 | 3 |
ecto-epithelial cell | 2.48e-11 | 34 |
keratinocyte | 2.53e-09 | 5 |
stratified squamous epithelial cell | 5.54e-08 | 6 |
keratin accumulating cell | 5.54e-08 | 6 |
stratified epithelial cell | 5.54e-08 | 6 |
keratinizing barrier epithelial cell | 5.54e-08 | 6 |
epithelial fate stem cell | 5.54e-08 | 6 |
stratified epithelial stem cell | 5.54e-08 | 6 |
surface ectodermal cell | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 3.49e-79 | 2 |
epidermis gland | 3.49e-79 | 2 |
gland of integumental system | 3.49e-79 | 2 |
sebaceous gland | 3.49e-79 | 2 |
skin sebaceous gland | 3.49e-79 | 2 |
sweat gland | 3.49e-79 | 2 |
sweat gland placode | 3.49e-79 | 2 |
sebaceous gland placode | 3.49e-79 | 2 |
skin epidermis | 1.52e-24 | 15 |
outer epithelium | 1.52e-24 | 15 |
enveloping layer of ectoderm | 1.52e-24 | 15 |
gingival epithelium | 2.09e-14 | 3 |
surface structure | 1.23e-10 | 99 |
skin of body | 1.56e-09 | 41 |
integument | 1.40e-08 | 46 |
integumental system | 1.40e-08 | 46 |
gland | 7.84e-07 | 59 |