FFCP PHASE1:Hg19::chr17:41019146..41019150,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90586 | |EntrezGene=90586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_NR_002773,uc002ibw.1_5end | |association_with_transcript=-11bp_to_NR_002773,uc002ibw.1_5end | ||
|cluster_id=chr17:41019146..41019150,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_AOC4_5end | |description=CAGE_peak_1_at_AOC4_5end | ||
|id=chr17:41019146..41019150,+ | |id=chr17:41019146..41019150,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.37e-35!12;CL:0000417!8.37e-35!12;CL:0000668!8.37e-35!12;CL:0000414!8.37e-35!12;CL:0000412!8.37e-35!12;CL:0000182!8.37e-35!12;CL:0000223!3.82e-09!59;CL:0002097!4.17e-07!2 | |ontology_enrichment_celltype=CL:0000181!8.37e-35!12;CL:0000417!8.37e-35!12;CL:0000668!8.37e-35!12;CL:0000414!8.37e-35!12;CL:0000412!8.37e-35!12;CL:0000182!8.37e-35!12;CL:0000223!3.82e-09!59;CL:0002097!4.17e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.56e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.56e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.52e-10;11!UBERON:0009497;1.15e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.73e-39!19;UBERON:0006925!7.73e-39!19;UBERON:0008836!7.73e-39!19;UBERON:0005057!1.79e-35!26;UBERON:0008835!1.89e-33!22;UBERON:0003894!1.89e-33!22;UBERON:0009854!5.76e-32!23;UBERON:0007499!2.36e-29!25;UBERON:0009497!2.36e-29!25;UBERON:0000015!2.36e-29!25;UBERON:0002423!2.36e-29!25;UBERON:0006235!2.36e-29!25;UBERON:0004161!2.36e-29!25;UBERON:0009856!3.39e-28!26;UBERON:0002368!3.52e-26!35;UBERON:0002365!1.57e-23!31;UBERON:0002330!1.57e-23!31;UBERON:0000949!3.81e-20!45;UBERON:0005172!4.50e-20!55;UBERON:0005173!4.50e-20!55;UBERON:0002417!5.57e-18!61;UBERON:0000916!5.57e-18!61;UBERON:0003929!1.23e-16!54;UBERON:0002530!4.02e-15!59;UBERON:0005911!1.37e-10!82;UBERON:0005177!1.05e-09!107;UBERON:0009569!4.03e-09!113;UBERON:0001041!1.19e-08!98;UBERON:0004921!9.21e-08!129;UBERON:0004185!9.21e-08!129;UBERON:0002405!3.91e-07!115 | |ontology_enrichment_uberon=UBERON:0002107!7.73e-39!19;UBERON:0006925!7.73e-39!19;UBERON:0008836!7.73e-39!19;UBERON:0005057!1.79e-35!26;UBERON:0008835!1.89e-33!22;UBERON:0003894!1.89e-33!22;UBERON:0009854!5.76e-32!23;UBERON:0007499!2.36e-29!25;UBERON:0009497!2.36e-29!25;UBERON:0000015!2.36e-29!25;UBERON:0002423!2.36e-29!25;UBERON:0006235!2.36e-29!25;UBERON:0004161!2.36e-29!25;UBERON:0009856!3.39e-28!26;UBERON:0002368!3.52e-26!35;UBERON:0002365!1.57e-23!31;UBERON:0002330!1.57e-23!31;UBERON:0000949!3.81e-20!45;UBERON:0005172!4.50e-20!55;UBERON:0005173!4.50e-20!55;UBERON:0002417!5.57e-18!61;UBERON:0000916!5.57e-18!61;UBERON:0003929!1.23e-16!54;UBERON:0002530!4.02e-15!59;UBERON:0005911!1.37e-10!82;UBERON:0005177!1.05e-09!107;UBERON:0009569!4.03e-09!113;UBERON:0001041!1.19e-08!98;UBERON:0004921!9.21e-08!129;UBERON:0004185!9.21e-08!129;UBERON:0002405!3.91e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.31e-33;19!UBERON:0006925;7.31e-33;19!UBERON:0002423;4.39e-25;25!UBERON:0002365;3.02e-20;31!UBERON:0002330;3.02e-20;31!UBERON:0002368;1.65e-17;33!UBERON:0000949;1.02e-12;43!UBERON:0005172;3.37e-09;52!UBERON:0005173;3.37e-09;52!UBERON:0002417;3.75e-07;58!UBERON:0000916;3.75e-07;58!UBERON:0002530;9.80e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.07e-33,19;UBERON:0006925,7.07e-33,19;UBERON:0008836,7.07e-33,19;UBERON:0008835,1.86e-28,22;UBERON:0003894,1.86e-28,22;UBERON:0009854,3.07e-27,23;UBERON:0007499,4.28e-25,25;UBERON:0009497,4.28e-25,25;UBERON:0000015,4.28e-25,25;UBERON:0002423,4.28e-25,25;UBERON:0006235,4.28e-25,25;UBERON:0004161,4.28e-25,25;UBERON:0009856,3.81e-24,26;UBERON:0002365,2.58e-20,31;UBERON:0002330,2.58e-20,31;UBERON:0002368,4.92e-18,35;UBERON:0000949,4.26e-14,45;UBERON:0003929,8.59e-12,54;UBERON:0005172,8.59e-12,54;UBERON:0005173,8.59e-12,54;UBERON:0002530,8.19e-11,59;UBERON:0002417,1.23e-10,60;UBERON:0000916,1.23e-10,60;UBERON:0005911,7.83e-08,82;UBERON:0001041,2.16e-07,87 | |||
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|short_description=p1@AOC4 | |short_description=p1@AOC4 | ||
}} | }} |
Latest revision as of 16:44, 24 September 2015
Short description: | p1@AOC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AOC4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -11bp_to_NR_002773, uc002ibw.1_5end |
EntrezGene: | AOC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.56e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 7.07e-33 | 19 |
digestive gland | 7.07e-33 | 19 |
liver bud | 7.07e-33 | 19 |
hepatic diverticulum | 1.86e-28 | 22 |
liver primordium | 1.86e-28 | 22 |
digestive tract diverticulum | 3.07e-27 | 23 |
epithelial sac | 4.28e-25 | 25 |
epithelium of foregut-midgut junction | 4.28e-25 | 25 |
anatomical boundary | 4.28e-25 | 25 |
hepatobiliary system | 4.28e-25 | 25 |
foregut-midgut junction | 4.28e-25 | 25 |
septum transversum | 4.28e-25 | 25 |
sac | 3.81e-24 | 26 |
exocrine gland | 2.58e-20 | 31 |
exocrine system | 2.58e-20 | 31 |
endocrine gland | 4.92e-18 | 35 |
endocrine system | 4.26e-14 | 45 |
gut epithelium | 8.59e-12 | 54 |
abdomen element | 8.59e-12 | 54 |
abdominal segment element | 8.59e-12 | 54 |
gland | 8.19e-11 | 59 |
abdominal segment of trunk | 1.23e-10 | 60 |
abdomen | 1.23e-10 | 60 |
endo-epithelium | 7.83e-08 | 82 |
foregut | 2.16e-07 | 87 |