FFCP PHASE1:Hg19::chr17:4883914..4883924,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:4883914..4883924,-
|short_description=p7@CAMTA2
|description=CAGE_peak_7_at_CAMTA2_5end
|association_with_transcript=0bp_to_uc010ckv.1_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23125 | |EntrezGene=23125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18807 | |HGNC=18807 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010ckv.1_5end | |||
|cluster_id=chr17:4883914..4883924,- | |||
|description=CAGE_peak_7_at_CAMTA2_5end | |||
|id=chr17:4883914..4883924,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.53e-21!115;UBERON:0002780!2.49e-18!41;UBERON:0001890!2.49e-18!41;UBERON:0006240!2.49e-18!41;UBERON:0003080!1.45e-17!42;UBERON:0001049!2.26e-16!57;UBERON:0005068!2.26e-16!57;UBERON:0006241!2.26e-16!57;UBERON:0007135!2.26e-16!57;UBERON:0002619!8.97e-15!22;UBERON:0001893!1.23e-14!34;UBERON:0002616!2.59e-14!59;UBERON:0002791!3.56e-14!33;UBERON:0001869!6.39e-14!32;UBERON:0002020!8.08e-14!34;UBERON:0003528!8.08e-14!34;UBERON:0001950!4.01e-13!20;UBERON:0000956!4.73e-13!25;UBERON:0000203!4.73e-13!25;UBERON:0000955!1.37e-12!69;UBERON:0006238!1.37e-12!69;UBERON:0001017!3.80e-11!82;UBERON:0005743!2.42e-10!86;UBERON:0003056!2.51e-09!61;UBERON:0000073!5.56e-09!94;UBERON:0001016!5.56e-09!94;UBERON:0002346!2.24e-08!90;UBERON:0003075!1.07e-07!86;UBERON:0007284!1.07e-07!86;UBERON:0000153!3.60e-07!129;UBERON:0007811!3.60e-07!129;UBERON:0000033!5.06e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;8.38e-22;5!UBERON:0003112;5.37e-13;1!UBERON:0011158;5.37e-13;1!UBERON:0003128;5.37e-13;1!UBERON:0001703;5.37e-13;1!UBERON:0002241;5.37e-13;1!UBERON:0002619;8.88e-13;22!UBERON:0000956;2.69e-11;25!UBERON:0000203;2.69e-11;25!UBERON:0001950;2.80e-09;20!UBERON:0002791;8.36e-09;32!UBERON:0001869;8.36e-09;32!UBERON:0002780;9.61e-08;41!UBERON:0001890;9.61e-08;41!UBERON:0002771;2.50e-07;2!UBERON:0000007;2.50e-07;2!UBERON:0001954;3.92e-07;2!UBERON:0003022;3.92e-07;2!UBERON:0002421;3.92e-07;2!UBERON:0002600;3.92e-07;2!UBERON:0001893;6.19e-07;34!UBERON:0003528;8.01e-07;34!UBERON:0002020;8.01e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.28e-21,5;UBERON:0003112,6.82e-13,1;UBERON:0011158,6.82e-13,1;UBERON:0003128,6.82e-13,1;UBERON:0001703,6.82e-13,1;UBERON:0002241,6.82e-13,1;UBERON:0004761,6.82e-13,1;UBERON:0009617,6.82e-13,1;UBERON:0002619,9.23e-13,22;UBERON:0000956,2.78e-11,25;UBERON:0000203,2.78e-11,25;UBERON:0000073,4.23e-10,53;UBERON:0002616,4.23e-10,53;UBERON:0002780,8.75e-10,41;UBERON:0001890,8.75e-10,41;UBERON:0003080,8.75e-10,41;UBERON:0006240,8.75e-10,41;UBERON:0001049,1.55e-09,56;UBERON:0005068,1.55e-09,56;UBERON:0006241,1.55e-09,56;UBERON:0007135,1.55e-09,56;UBERON:0001950,3.16e-09,20;UBERON:0002791,7.19e-09,32;UBERON:0001869,7.19e-09,32;UBERON:0003528,2.34e-08,34;UBERON:0002020,2.34e-08,34;UBERON:0001893,2.34e-08,34;UBERON:0000955,1.21e-07,68;UBERON:0006238,1.21e-07,68;UBERON:0002771,2.43e-07,2;UBERON:0000007,2.58e-07,2;UBERON:0001954,3.09e-07,2;UBERON:0003022,3.09e-07,2;UBERON:0002421,3.09e-07,2;UBERON:0002600,3.09e-07,2;UBERON:0005253,4.42e-07,2 | |||
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| ||
|short_description=p7@CAMTA2 | |||
}} | }} |
Latest revision as of 04:11, 16 September 2015
Short description: | p7@CAMTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAMTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010ckv.1_5end |
EntrezGene: | CAMTA2 |
HGNC: | 18807 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.28e-21 | 5 |
olfactory region | 6.82e-13 | 1 |
primary subdivision of skull | 6.82e-13 | 1 |
cranium | 6.82e-13 | 1 |
neurocranium | 6.82e-13 | 1 |
chondrocranium | 6.82e-13 | 1 |
cartilaginous neurocranium | 6.82e-13 | 1 |
head paraxial mesoderm | 6.82e-13 | 1 |
regional part of cerebral cortex | 9.23e-13 | 22 |
cerebral cortex | 2.78e-11 | 25 |
pallium | 2.78e-11 | 25 |
regional part of nervous system | 4.23e-10 | 53 |
regional part of brain | 4.23e-10 | 53 |
regional part of forebrain | 8.75e-10 | 41 |
forebrain | 8.75e-10 | 41 |
anterior neural tube | 8.75e-10 | 41 |
future forebrain | 8.75e-10 | 41 |
neural tube | 1.55e-09 | 56 |
neural rod | 1.55e-09 | 56 |
future spinal cord | 1.55e-09 | 56 |
neural keel | 1.55e-09 | 56 |
neocortex | 3.16e-09 | 20 |
regional part of telencephalon | 7.19e-09 | 32 |
cerebral hemisphere | 7.19e-09 | 32 |
brain grey matter | 2.34e-08 | 34 |
gray matter | 2.34e-08 | 34 |
telencephalon | 2.34e-08 | 34 |
brain | 1.21e-07 | 68 |
future brain | 1.21e-07 | 68 |
middle temporal gyrus | 2.43e-07 | 2 |
pituitary gland | 2.58e-07 | 2 |
Ammon's horn | 3.09e-07 | 2 |
lobe parts of cerebral cortex | 3.09e-07 | 2 |
hippocampal formation | 3.09e-07 | 2 |
limbic lobe | 3.09e-07 | 2 |
head mesenchyme | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.69e-07 | 2 |