FFCP PHASE1:Hg19::chr19:10397723..10397732,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3386 | |EntrezGene=3386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5347 | |HGNC=5347 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWR0 | |UniProt=Q9BWR0 | ||
|association_with_transcript=34bp_to_BT009816_5end | |association_with_transcript=34bp_to_BT009816_5end | ||
|cluster_id=chr19:10397723..10397732,+ | |||
|coexpression_cluster_id=C374 | |||
|description=CAGE_peak_6_at_ICAM4_5end | |description=CAGE_peak_6_at_ICAM4_5end | ||
|id=chr19:10397723..10397732,+ | |id=chr19:10397723..10397732,+ | ||
|ontology_enrichment_celltype=CL:0000875!2.53e-17!3;CL:0002396!2.53e-17!3;CL:0000763!1.53e-15!112;CL:0000049!1.53e-15!112;CL:0000764!5.89e-13!2;CL:0000765!5.89e-13!2;CL:0000050!5.89e-13!2;CL:0000038!5.89e-13!2;CL:0000558!5.89e-13!2;CL:0000547!5.89e-13!2;CL:0000549!5.89e-13!2;CL:0000550!5.89e-13!2;CL:0000552!5.89e-13!2;CL:0002032!3.19e-09!165;CL:0000837!3.19e-09!165;CL:0000037!1.11e-08!172;CL:0000566!1.11e-08!172;CL:0000988!5.57e-08!182 | |ontology_enrichment_celltype=CL:0000875!2.53e-17!3;CL:0002396!2.53e-17!3;CL:0000763!1.53e-15!112;CL:0000049!1.53e-15!112;CL:0000764!5.89e-13!2;CL:0000765!5.89e-13!2;CL:0000050!5.89e-13!2;CL:0000038!5.89e-13!2;CL:0000558!5.89e-13!2;CL:0000547!5.89e-13!2;CL:0000549!5.89e-13!2;CL:0000550!5.89e-13!2;CL:0000552!5.89e-13!2;CL:0002032!3.19e-09!165;CL:0000837!3.19e-09!165;CL:0000037!1.11e-08!172;CL:0000566!1.11e-08!172;CL:0000988!5.57e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000764;6.61e-50;2!CL:0000558;6.61e-50;2!CL:0000632;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.00e-50,2;CL:0000765,4.00e-50,2;CL:0000050,4.00e-50,2;CL:0000038,4.00e-50,2;CL:0000558,4.00e-50,2;CL:0000547,4.00e-50,2;CL:0000549,4.00e-50,2;CL:0000550,4.00e-50,2;CL:0000552,4.00e-50,2;CL:0000632,1.41e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!8.05e-25!8;DOID:8692!6.19e-20!31;DOID:1240!2.05e-15!39;DOID:2531!2.69e-11!51;DOID:0060083!2.69e-11!51;DOID:8552!3.36e-07!1 | |ontology_enrichment_disease=DOID:1036!8.05e-25!8;DOID:8692!6.19e-20!31;DOID:1240!2.05e-15!39;DOID:2531!2.69e-11!51;DOID:0060083!2.69e-11!51;DOID:8552!3.36e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.42e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.85e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.86e-09!15;UBERON:0000179!1.86e-09!15;UBERON:0000463!1.86e-09!15 | |ontology_enrichment_uberon=UBERON:0000178!1.86e-09!15;UBERON:0000179!1.86e-09!15;UBERON:0000463!1.86e-09!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,1.23087398947712,5.95002492647163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.997270091400938,0.451191321234361,0.392125068635479,0.335643173951685,1.51802986179348,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,1.23087398947712,5.95002492647163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.997270091400938,0.451191321234361,0.392125068635479,0.335643173951685,1.51802986179348,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@ICAM4 | |short_description=p6@ICAM4 | ||
}} | }} |
Latest revision as of 00:37, 25 September 2015
Short description: | p6@ICAM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ICAM4_5end |
Coexpression cluster: | C374_acute_leukemia_Whole_Smooth_splenic_chronic_liver |
Association with transcript: | 34bp_to_BT009816_5end |
EntrezGene: | ICAM4 |
HGNC: | 5347 |
UniProt: | Q9BWR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.00e-50 | 2 |
erythroblast | 4.00e-50 | 2 |
megakaryocyte-erythroid progenitor cell | 4.00e-50 | 2 |
erythroid progenitor cell | 4.00e-50 | 2 |
reticulocyte | 4.00e-50 | 2 |
proerythroblast | 4.00e-50 | 2 |
basophilic erythroblast | 4.00e-50 | 2 |
polychromatophilic erythroblast | 4.00e-50 | 2 |
orthochromatic erythroblast | 4.00e-50 | 2 |
hepatic stellate cell | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.85e-08 | 31 |