FFCP PHASE1:Hg19::chr1:151028780..151028793,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56882 | |EntrezGene=56882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=17719 | |HGNC=17719 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRR8 | |UniProt=Q9NRR8 | ||
|association_with_transcript=-396bp_to_BC012796_5end | |association_with_transcript=-396bp_to_BC012796_5end | ||
|cluster_id=chr1:151028780..151028793,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_CDC42SE1_5end | |description=CAGE_peak_3_at_CDC42SE1_5end | ||
|id=chr1:151028780..151028793,- | |id=chr1:151028780..151028793,- | ||
|ontology_enrichment_celltype=CL:0000738!1.32e-38!140;CL:0002087!5.97e-32!119;CL:0000037!1.01e-30!172;CL:0000566!1.01e-30!172;CL:0000838!2.36e-30!52;CL:0000791!1.25e-29!18;CL:0000789!1.25e-29!18;CL:0002420!1.25e-29!18;CL:0002419!1.25e-29!18;CL:0000790!1.25e-29!18;CL:0000542!1.45e-29!53;CL:0000051!1.45e-29!53;CL:0002031!1.64e-29!124;CL:0002032!5.03e-29!165;CL:0000837!5.03e-29!165;CL:0000988!6.87e-28!182;CL:0000084!3.21e-24!25;CL:0000827!3.21e-24!25;CL:0000625!3.65e-19!11;CL:0000236!4.11e-13!14;CL:0000624!3.51e-11!6;CL:0000766!1.57e-08!76;CL:0000763!2.51e-07!112;CL:0000049!2.51e-07!112;CL:0000094!5.35e-07!8;CL:0002057!6.40e-07!42 | |ontology_enrichment_celltype=CL:0000738!1.32e-38!140;CL:0002087!5.97e-32!119;CL:0000037!1.01e-30!172;CL:0000566!1.01e-30!172;CL:0000838!2.36e-30!52;CL:0000791!1.25e-29!18;CL:0000789!1.25e-29!18;CL:0002420!1.25e-29!18;CL:0002419!1.25e-29!18;CL:0000790!1.25e-29!18;CL:0000542!1.45e-29!53;CL:0000051!1.45e-29!53;CL:0002031!1.64e-29!124;CL:0002032!5.03e-29!165;CL:0000837!5.03e-29!165;CL:0000988!6.87e-28!182;CL:0000084!3.21e-24!25;CL:0000827!3.21e-24!25;CL:0000625!3.65e-19!11;CL:0000236!4.11e-13!14;CL:0000624!3.51e-11!6;CL:0000766!1.57e-08!76;CL:0000763!2.51e-07!112;CL:0000049!2.51e-07!112;CL:0000094!5.35e-07!8;CL:0002057!6.40e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.94e-44;18!CL:0000789;1.94e-44;18!CL:0002419;1.94e-44;18!CL:0000084;2.77e-34;25!CL:0000625;4.28e-31;11!CL:0000542;2.24e-25;53!CL:0000624;8.46e-18;6!CL:0000236;3.81e-16;13!CL:0000898;2.87e-10;3!CL:0002087;3.20e-10;104!CL:0000226;3.09e-09;3!CL:0000842;3.09e-09;3!CL:0000623;8.77e-09;3!CL:0000945;5.78e-08;24!CL:0000815;1.84e-07;2!CL:0000792;1.84e-07;2!CL:0002677;1.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.76e-44,18;CL:0000789,1.76e-44,18;CL:0002420,1.76e-44,18;CL:0002419,1.76e-44,18;CL:0000790,1.76e-44,18;CL:0000838,1.37e-42,52;CL:0000542,1.26e-41,53;CL:0000051,1.26e-41,53;CL:0000084,2.81e-34,25;CL:0000827,2.81e-34,25;CL:0000625,3.34e-31,11;CL:0000738,1.93e-27,136;CL:0002087,8.38e-26,115;CL:0002031,3.58e-21,120;CL:0000037,3.64e-20,168;CL:0000988,1.34e-18,177;CL:0002032,9.63e-18,161;CL:0000837,9.63e-18,161;CL:0000624,9.80e-18,6;CL:0000236,6.46e-15,14;CL:0000898,3.34e-10,3;CL:0000226,2.64e-09,3;CL:0000842,2.64e-09,3;CL:0000623,7.74e-09,3;CL:0000825,7.74e-09,3;CL:0000945,5.44e-08,24;CL:0000826,5.44e-08,24;CL:0000815,1.93e-07,2;CL:0000792,1.93e-07,2;CL:0002677,1.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.94e-44;18!CL:0000051;2.24e-25;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.52e-16!102;UBERON:0003061!7.52e-16!102;UBERON:0002193!2.94e-15!112;UBERON:0000178!4.60e-15!15;UBERON:0000179!4.60e-15!15;UBERON:0000463!4.60e-15!15;UBERON:0004177!3.70e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!7.52e-16!102;UBERON:0003061!7.52e-16!102;UBERON:0002193!2.94e-15!112;UBERON:0000178!4.60e-15!15;UBERON:0000179!4.60e-15!15;UBERON:0000463!4.60e-15!15;UBERON:0004177!3.70e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.84e-25;15!UBERON:0000179;4.84e-25;15!UBERON:0000463;4.84e-25;15!UBERON:0002390;7.53e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.06e-25,15;UBERON:0000179,4.06e-25,15;UBERON:0000463,4.06e-25,15 | |||
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| ||
|short_description=p3@CDC42SE1 | |short_description=p3@CDC42SE1 | ||
}} | }} |
Latest revision as of 23:54, 16 September 2015
Short description: | p3@CDC42SE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDC42SE1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -396bp_to_BC012796_5end |
EntrezGene: | CDC42SE1 |
HGNC: | 17719 |
UniProt: | Q9NRR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.76e-44 | 18 |
alpha-beta T cell | 1.76e-44 | 18 |
immature T cell | 1.76e-44 | 18 |
mature T cell | 1.76e-44 | 18 |
immature alpha-beta T cell | 1.76e-44 | 18 |
lymphoid lineage restricted progenitor cell | 1.37e-42 | 52 |
lymphocyte | 1.26e-41 | 53 |
common lymphoid progenitor | 1.26e-41 | 53 |
T cell | 2.81e-34 | 25 |
pro-T cell | 2.81e-34 | 25 |
CD8-positive, alpha-beta T cell | 3.34e-31 | 11 |
leukocyte | 1.93e-27 | 136 |
nongranular leukocyte | 8.38e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 3.58e-21 | 120 |
hematopoietic stem cell | 3.64e-20 | 168 |
hematopoietic cell | 1.34e-18 | 177 |
hematopoietic oligopotent progenitor cell | 9.63e-18 | 161 |
hematopoietic multipotent progenitor cell | 9.63e-18 | 161 |
CD4-positive, alpha-beta T cell | 9.80e-18 | 6 |
B cell | 6.46e-15 | 14 |
naive T cell | 3.34e-10 | 3 |
single nucleate cell | 2.64e-09 | 3 |
mononuclear cell | 2.64e-09 | 3 |
natural killer cell | 7.74e-09 | 3 |
pro-NK cell | 7.74e-09 | 3 |
lymphocyte of B lineage | 5.44e-08 | 24 |
pro-B cell | 5.44e-08 | 24 |
regulatory T cell | 1.93e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.93e-07 | 2 |
naive regulatory T cell | 1.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.06e-25 | 15 |
haemolymphatic fluid | 4.06e-25 | 15 |
organism substance | 4.06e-25 | 15 |