FFCP PHASE1:Hg19::chr17:57233046..57233064,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:57233046..57233064,+
|short_description=p2@PRR11
|description=CAGE_peak_2_at_PRR11_5end
|association_with_transcript=-28bp_to_uc002ixf.1,uc002ixg.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55771 | |EntrezGene=55771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25619 | |HGNC=25619 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HE9 | |UniProt=Q96HE9 | ||
|association_with_transcript=-28bp_to_uc002ixf.1,uc002ixg.1_5end | |||
|cluster_id=chr17:57233046..57233064,+ | |||
|coexpression_cluster_id=C3660 | |||
|description=CAGE_peak_2_at_PRR11_5end | |||
|id=chr17:57233046..57233064,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.37e-17!679;CL:0000004!4.37e-17!679;CL:0000255!4.37e-17!679;CL:0000012!1.37e-16!682;CL:0000066!7.20e-15!254;CL:0000003!4.93e-11!722;CL:0002321!5.46e-11!248;CL:0000220!1.33e-10!246;CL:0000076!9.10e-09!62;CL:0000063!2.74e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.20e-15,253;CL:0002321,1.24e-10,250;CL:0000076,1.27e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.33e-34!235;DOID:14566!5.76e-33!239;DOID:0050687!7.26e-17!143;DOID:0050686!1.04e-14!137;DOID:2531!5.97e-13!51;DOID:0060083!5.97e-13!51;DOID:305!2.18e-12!106;DOID:1240!1.29e-10!39;DOID:8692!2.52e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.76e-09;31!DOID:1240;6.53e-09;39!DOID:2531;2.60e-08;51!DOID:0060083;2.60e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.82e-35,235;DOID:14566,3.32e-33,239;DOID:0050687,1.54e-16,143;DOID:0050686,9.54e-15,137;DOID:2531,2.87e-13,51;DOID:0060083,2.87e-13,51;DOID:305,3.92e-12,106;DOID:1240,4.44e-11,39;DOID:8692,1.01e-09,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@PRR11 | |||
}} | }} |
Latest revision as of 12:38, 16 September 2015
Short description: | p2@PRR11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRR11_5end |
Coexpression cluster: | C3660_breast_medulloblastoma_acute_rhabdomyosarcoma_prostate_Myoblast_neuroblastoma |
Association with transcript: | -28bp_to_uc002ixf.1, uc002ixg.1_5end |
EntrezGene: | PRR11 |
HGNC: | 25619 |
UniProt: | Q96HE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.20e-15 | 253 |
embryonic cell | 1.24e-10 | 250 |
squamous epithelial cell | 1.27e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.82e-35 | 235 |
disease of cellular proliferation | 3.32e-33 | 239 |
cell type cancer | 1.54e-16 | 143 |
organ system cancer | 9.54e-15 | 137 |
hematologic cancer | 2.87e-13 | 51 |
immune system cancer | 2.87e-13 | 51 |
carcinoma | 3.92e-12 | 106 |
leukemia | 4.44e-11 | 39 |
myeloid leukemia | 1.01e-09 | 31 |