FFCP PHASE1:Hg19::chr17:60705055..60705066,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:60705055..60705066,+
|short_description=p3@MRC2
|description=CAGE_peak_3_at_MRC2_5end
|association_with_transcript=293bp_to_ENST00000303375,NM_006039,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9902 | |EntrezGene=9902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16875 | |HGNC=16875 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBG0 | |UniProt=Q9UBG0 | ||
|association_with_transcript=293bp_to_ENST00000303375,NM_006039,uc002jac.2,uc002jad.2_5end | |||
|cluster_id=chr17:60705055..60705066,+ | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_3_at_MRC2_5end | |||
|id=chr17:60705055..60705066,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.16e-42!180;CL:0000057!8.27e-20!75;CL:0000183!7.77e-18!59;CL:0000680!1.47e-17!57;CL:0000056!1.47e-17!57;CL:0000355!1.47e-17!57;CL:0000187!3.70e-16!54;CL:0000393!5.06e-15!60;CL:0000211!5.06e-15!60;CL:0000192!1.72e-13!42;CL:0000514!1.72e-13!42;CL:0000222!4.76e-12!119;CL:0000359!3.61e-11!32;CL:0000220!2.34e-07!246;CL:0002321!3.67e-07!248;CL:0002620!3.99e-07!23;CL:0002371!9.22e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.49e-11;32!CL:0000192;6.10e-11;43!CL:0000187;8.56e-10;55!CL:0000057;5.57e-09;73!CL:0002320;3.26e-08;188!CL:0000393;3.79e-08;61!CL:0000211;3.79e-08;61!CL:0002620;9.84e-08;23!CL:0000048;3.26e-07;58!CL:0000134;3.84e-07;55!CL:0000723;4.34e-07;61!CL:0000327;6.48e-07;15!CL:0002334;9.90e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.69e-22,76;CL:0000680,2.87e-19,58;CL:0000056,2.87e-19,58;CL:0000355,2.87e-19,58;CL:0000187,9.26e-18,55;CL:0000393,6.54e-16,61;CL:0000211,6.54e-16,61;CL:0000192,6.77e-15,43;CL:0000514,6.77e-15,43;CL:0000359,7.25e-12,32;CL:0000222,2.00e-11,121;CL:0000048,7.69e-10,427;CL:0000723,3.48e-09,433;CL:0000034,2.26e-08,441;CL:0002620,1.07e-07,23;CL:0000327,4.38e-07,15;CL:0002334,9.90e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;6.10e-11;43!CL:0000355;3.56e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.20e-20!83;UBERON:0002329!1.20e-20!83;UBERON:0003077!1.20e-20!83;UBERON:0003059!1.20e-20!83;UBERON:0007282!1.20e-20!83;UBERON:0009618!1.20e-20!83;UBERON:0007285!1.20e-20!83;UBERON:0004290!7.82e-19!70;UBERON:0000486!2.15e-18!82;UBERON:0001134!4.65e-18!61;UBERON:0002036!4.65e-18!61;UBERON:0003082!4.65e-18!61;UBERON:0002385!1.16e-17!63;UBERON:0001015!1.16e-17!63;UBERON:0000383!1.16e-17!63;UBERON:0005256!5.40e-16!143;UBERON:0000475!2.27e-13!365;UBERON:0002100!2.07e-12!216;UBERON:0001637!1.46e-10!42;UBERON:0003509!1.46e-10!42;UBERON:0004572!1.46e-10!42;UBERON:0004872!1.56e-10!84;UBERON:0000481!2.09e-10!347;UBERON:0002049!3.02e-10!79;UBERON:0007798!3.02e-10!79;UBERON:0004573!3.70e-10!33;UBERON:0004571!3.70e-10!33;UBERON:0003104!8.52e-10!238;UBERON:0009142!8.52e-10!238;UBERON:0000468!1.22e-09!659;UBERON:0001981!3.49e-09!60;UBERON:0007500!3.49e-09!60;UBERON:0004537!3.49e-09!60;UBERON:0006965!3.49e-09!60;UBERON:0003914!7.74e-09!118;UBERON:0000055!8.44e-08!69;UBERON:0000490!1.13e-07!138;UBERON:0003102!1.55e-07!95;UBERON:0004535!1.59e-07!110;UBERON:0000119!1.62e-07!312;UBERON:0001009!2.25e-07!113;UBERON:0000483!3.49e-07!309;UBERON:0000948!4.59e-07!24;UBERON:0005498!4.59e-07!24;UBERON:0004140!4.59e-07!24;UBERON:0009881!4.59e-07!24;UBERON:0004141!4.59e-07!24;UBERON:0003084!4.59e-07!24;UBERON:0007005!4.59e-07!24;UBERON:0004139!4.59e-07!24;UBERON:0004291!4.59e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.91e-09;33!UBERON:0004571;2.91e-09;33!UBERON:0002385;3.04e-08;31!UBERON:0001015;3.04e-08;31!UBERON:0000383;3.04e-08;31!UBERON:0002384;9.48e-08;198!UBERON:0001637;1.13e-07;42!UBERON:0003509;1.13e-07;42!UBERON:0004572;1.13e-07;42!UBERON:0002204;1.43e-07;70!UBERON:0000948;9.59e-07;22 | |||
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| ||
|short_description=p3@MRC2 | |||
}} | }} |
Latest revision as of 16:12, 16 September 2015
Short description: | p3@MRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRC2_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 293bp_to_ENST00000303375, NM_006039, uc002jac.2, uc002jad.2_5end |
EntrezGene: | MRC2 |
HGNC: | 16875 |
UniProt: | Q9UBG0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.69e-22 | 76 |
muscle precursor cell | 2.87e-19 | 58 |
myoblast | 2.87e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-19 | 58 |
muscle cell | 9.26e-18 | 55 |
electrically responsive cell | 6.54e-16 | 61 |
electrically active cell | 6.54e-16 | 61 |
smooth muscle cell | 6.77e-15 | 43 |
smooth muscle myoblast | 6.77e-15 | 43 |
vascular associated smooth muscle cell | 7.25e-12 | 32 |
mesodermal cell | 2.00e-11 | 121 |
multi fate stem cell | 7.69e-10 | 427 |
somatic stem cell | 3.48e-09 | 433 |
stem cell | 2.26e-08 | 441 |
skin fibroblast | 1.07e-07 | 23 |
extracellular matrix secreting cell | 4.38e-07 | 15 |
preadipocyte | 9.90e-07 | 12 |