FFCP PHASE1:Hg19::chr3:13493281..13493302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:13493281..13493302,- | |||
|description=CAGE_peak_at_chr3:13493281..13493302,- | |description=CAGE_peak_at_chr3:13493281..13493302,- | ||
|id=chr3:13493281..13493302,- | |id=chr3:13493281..13493302,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000624;3.74e-09;6!CL:0000623;7.02e-09;3!CL:0000791;9.18e-08;18!CL:0000789;9.18e-08;18!CL:0002419;9.18e-08;18!CL:0000084;1.04e-07;25!CL:1001319;4.68e-07;1!CL:1000600;4.68e-07;1!CL:0000895;4.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.16e-09,6;CL:0000623,5.26e-09,3;CL:0000825,5.26e-09,3;CL:0000791,7.65e-08,18;CL:0000789,7.65e-08,18;CL:0002420,7.65e-08,18;CL:0002419,7.65e-08,18;CL:0000790,7.65e-08,18;CL:0000084,1.02e-07,25;CL:0000827,1.02e-07,25;CL:0000810,6.88e-07,1;CL:0000895,6.88e-07,1;CL:0002436,6.88e-07,1;CL:0002427,6.88e-07,1;CL:0002428,6.88e-07,1;CL:0002429,6.88e-07,1;CL:0002433,6.88e-07,1;CL:0002431,6.88e-07,1;CL:0002432,6.88e-07,1;CL:1001319,8.18e-07,1;CL:1000600,8.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;9.18e-08;18!CL:0002427;4.68e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.72e-11!143;DOID:305!2.42e-11!106;DOID:162!8.49e-11!235;DOID:14566!1.14e-10!239 | |ontology_enrichment_disease=DOID:0050687!1.72e-11!143;DOID:305!2.42e-11!106;DOID:162!8.49e-11!235;DOID:14566!1.14e-10!239 | ||
|ontology_enrichment_disease_v019=DOID:1799;4.68e-07;1!DOID:10165;4.68e-07;1!DOID:1798;4.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.06e-07,1;DOID:10165,4.06e-07,1;DOID:1798,4.06e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;4.68e-07;1!UBERON:0001256;4.68e-07;1!UBERON:0001259;4.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,8.18e-07,1;UBERON:0001256,8.18e-07,1;UBERON:0001259,8.18e-07,1;UBERON:0002370,8.45e-07,4;UBERON:0005058,8.45e-07,4;UBERON:0009113,8.45e-07,4;UBERON:0003295,8.45e-07,4;UBERON:0005562,8.45e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.0821005894499457,0.393553906568396,0.786728553697808,0,0.309632246632152,0,0,0,0.309868802321207,0.284338464974843,0.587200878669695,0,0,0.434021741431704,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.945928919554341,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0.868755378820466,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0.786839080455332,1.57204305099666,1.85041349099558,0,0.32592226663359,0,0,0.334231370655521,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0.889719378972363,0.802622484269139,1.04535523804977,0.226618685395132,1.14966148080576,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0.710331756132051,0,0.80642697289893,1.06976078313403,1.30341963494519,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.458426764241994,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0.365921118388786,0.397589304964456,0.580969714347592,1.0366105501537,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0.337169380156203,0,0.330881918197182,0,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0.882926198829301,0.245976877086227,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.576479813667846,1.38866676769018,0.126995788584338,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,1.50939302401662,2.31017465303547,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,2.29391162142713,0,0.476463550915578,0,1.29694662238543,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0.371606350251437,0,0.0711418433484141,0,0,0.5745161103971,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.568272293612826,0,0,0,0,0.140669416410513,0,0,1.68900326502395,0.597743964753209,0,0,0.306806047506464,0.492339221844278,0.311039587661807,0.0898683511473268,0,1.53471711068062,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,1.01701460117107,0.472775363535873,0,0.291604613383254,0.173624994933292,0,0.60298219312704,0,0.221158519862449,0,0,0,0,0,0.227884111694002,1.1528195219403,0.987334088507493,0.325942115766024,0,0,0,0,0.156980256395025,0,0.451191321234361,0.980312671588698,0,0.569261198172555,0.317873157960757,0.421996129056054,0.326465616318295,0.848118428603645,0,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0.586993856796269,0.971121518136371,0.394584402849391,0,0,0.126373159256976,0.60129367765797,0,0,0,0,0,0.569219092059585,0.138674673013139,0.173559738335131,0.293977192243133,0.0870592065804026,0.52418000472609,0,1.35458863804719,1.46178634172371,1.64230914106418,0,0.0882561266915003,0.677942222341597,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0,0,0.144090417154106,0.114536596165916,0.686379991447858,0,0.124252535565433,0.235694034616795,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,1.05154941711726,0,0,0,0.399358000997982,0,0,0,0,0,0.787831823072237,0.164831716762333,0.337017719270924,0,0.338693328263138,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0.449947783103001,0,0.0607495566580247,0.335434687599266,0,0.419636705079985,0,0.35857467866569,0.383830394638891,0,0,0,0.542999601753713,0,0,0,0.492555124496034,0,0.339936274560377,0,0,0.129282956361551,0.132232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| ||
|short_description=p@chr3:13493281..13493302,- | |short_description=p@chr3:13493281..13493302,- | ||
}} | }} |
Latest revision as of 16:07, 29 July 2015
Short description: | p@chr3:13493281..13493302, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:13493281..13493302, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.16e-09 | 6 |
natural killer cell | 5.26e-09 | 3 |
pro-NK cell | 5.26e-09 | 3 |
mature alpha-beta T cell | 7.65e-08 | 18 |
alpha-beta T cell | 7.65e-08 | 18 |
immature T cell | 7.65e-08 | 18 |
mature T cell | 7.65e-08 | 18 |
immature alpha-beta T cell | 7.65e-08 | 18 |
T cell | 1.02e-07 | 25 |
pro-T cell | 1.02e-07 | 25 |
CD4-positive, alpha-beta thymocyte | 6.88e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.88e-07 | 1 |
mature CD4 single-positive thymocyte | 6.88e-07 | 1 |
resting double-positive thymocyte | 6.88e-07 | 1 |
double-positive blast | 6.88e-07 | 1 |
CD69-positive double-positive thymocyte | 6.88e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.88e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.88e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.88e-07 | 1 |
bladder cell | 8.18e-07 | 1 |
lower urinary tract cell | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 8.18e-07 | 1 |
wall of urinary bladder | 8.18e-07 | 1 |
mucosa of urinary bladder | 8.18e-07 | 1 |
thymus | 8.45e-07 | 4 |
hemolymphoid system gland | 8.45e-07 | 4 |
thymic region | 8.45e-07 | 4 |
pharyngeal gland | 8.45e-07 | 4 |
thymus primordium | 8.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.06e-07 | 1 |
endocrine pancreas cancer | 4.06e-07 | 1 |
pancreatic endocrine carcinoma | 4.06e-07 | 1 |