FF:11800-124C9: Difference between revisions

Latest revision as of 18:21, 4 June 2020

Name:	CD14-CD16+ Monocytes, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs13207
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	23
cell type	monocyte
cell line	NA
company	NA
collaboration	Michael Rehli (University of Regensberg)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	29
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005837

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13207		CAGE		DRX008168		DRR009040

Accession ID Hg19

Library id		BAM		CTSS
CNhs13207		DRZ000465		DRZ001850

Accession ID Hg38

Library id		BAM		CTSS
CNhs13207		DRZ011815		DRZ013200

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.114
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.0788
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.296
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0847
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.112
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.119
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.476
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.145
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.145
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.387
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.246
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.21
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.578
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.145
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.0839
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.12
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.0788
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.034
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.405
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.855
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.579
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.53
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.581
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.446
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.145
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.679
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.0788
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.145
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.362
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.62
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.303
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0.504
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	1.162
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0788
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.3
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	1.194
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0.174
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.53
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.145
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.0788
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	1.051
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13207

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	4.88395e-7
MA0003.1	MA0003.1	0.0551
MA0004.1	MA0004.1	0.559
MA0006.1	MA0006.1	0.88
MA0007.1	MA0007.1	0.974
MA0009.1	MA0009.1	0.137
MA0014.1	MA0014.1	0.654
MA0017.1	MA0017.1	0.00875
MA0018.2	MA0018.2	0.1
MA0019.1	MA0019.1	0.611
MA0024.1	MA0024.1	0.0133
MA0025.1	MA0025.1	0.158
MA0027.1	MA0027.1	0.74
MA0028.1	MA0028.1	0.269
MA0029.1	MA0029.1	0.255
MA0030.1	MA0030.1	0.284
MA0031.1	MA0031.1	0.525
MA0035.2	MA0035.2	0.885
MA0038.1	MA0038.1	0.028
MA0039.2	MA0039.2	0.554
MA0040.1	MA0040.1	0.43
MA0041.1	MA0041.1	0.452
MA0042.1	MA0042.1	0.278
MA0043.1	MA0043.1	0.0674
MA0046.1	MA0046.1	0.0444
MA0047.2	MA0047.2	0.132
MA0048.1	MA0048.1	0.803
MA0050.1	MA0050.1	4.06443e-13
MA0051.1	MA0051.1	2.25679e-6
MA0052.1	MA0052.1	0.741
MA0055.1	MA0055.1	0.815
MA0057.1	MA0057.1	0.929
MA0058.1	MA0058.1	0.347
MA0059.1	MA0059.1	0.549
MA0060.1	MA0060.1	1.87242e-5
MA0061.1	MA0061.1	0.00388
MA0062.2	MA0062.2	2.34337e-5
MA0065.2	MA0065.2	0.0103
MA0066.1	MA0066.1	0.149
MA0067.1	MA0067.1	0.00718
MA0068.1	MA0068.1	0.456
MA0069.1	MA0069.1	0.913
MA0070.1	MA0070.1	0.00806
MA0071.1	MA0071.1	0.044
MA0072.1	MA0072.1	0.596
MA0073.1	MA0073.1	0.407
MA0074.1	MA0074.1	0.316
MA0076.1	MA0076.1	0.222
MA0077.1	MA0077.1	0.064
MA0078.1	MA0078.1	0.836
MA0079.2	MA0079.2	0.655
MA0080.2	MA0080.2	7.75163e-17
MA0081.1	MA0081.1	4.53589e-5
MA0083.1	MA0083.1	0.409
MA0084.1	MA0084.1	0.395
MA0087.1	MA0087.1	0.308
MA0088.1	MA0088.1	0.464
MA0090.1	MA0090.1	0.0049
MA0091.1	MA0091.1	0.325
MA0092.1	MA0092.1	0.413
MA0093.1	MA0093.1	0.632
MA0099.2	MA0099.2	0.621
MA0100.1	MA0100.1	0.936
MA0101.1	MA0101.1	0.036
MA0102.2	MA0102.2	5.46128e-4
MA0103.1	MA0103.1	0.531
MA0104.2	MA0104.2	0.569
MA0105.1	MA0105.1	2.21655e-5
MA0106.1	MA0106.1	0.591
MA0107.1	MA0107.1	0.0143
MA0108.2	MA0108.2	5.55231e-10
MA0111.1	MA0111.1	0.256
MA0112.2	MA0112.2	6.5678e-4
MA0113.1	MA0113.1	0.775
MA0114.1	MA0114.1	0.063
MA0115.1	MA0115.1	0.305
MA0116.1	MA0116.1	3.67642e-5
MA0117.1	MA0117.1	0.498
MA0119.1	MA0119.1	0.328
MA0122.1	MA0122.1	0.691
MA0124.1	MA0124.1	0.243
MA0125.1	MA0125.1	0.235
MA0131.1	MA0131.1	0.637
MA0135.1	MA0135.1	0.935
MA0136.1	MA0136.1	3.20329e-20
MA0137.2	MA0137.2	0.49
MA0138.2	MA0138.2	0.724
MA0139.1	MA0139.1	0.594
MA0140.1	MA0140.1	0.905
MA0141.1	MA0141.1	0.0158
MA0142.1	MA0142.1	0.384
MA0143.1	MA0143.1	0.81
MA0144.1	MA0144.1	0.899
MA0145.1	MA0145.1	0.23
MA0146.1	MA0146.1	0.0249
MA0147.1	MA0147.1	0.625
MA0148.1	MA0148.1	0.563
MA0149.1	MA0149.1	0.116
MA0150.1	MA0150.1	0.1
MA0152.1	MA0152.1	0.0322
MA0153.1	MA0153.1	0.00547
MA0154.1	MA0154.1	0.00214
MA0155.1	MA0155.1	0.876
MA0156.1	MA0156.1	4.32693e-11
MA0157.1	MA0157.1	0.279
MA0159.1	MA0159.1	0.0741
MA0160.1	MA0160.1	0.00986
MA0162.1	MA0162.1	0.639
MA0163.1	MA0163.1	1.08892e-12
MA0164.1	MA0164.1	0.907
MA0258.1	MA0258.1	0.0103
MA0259.1	MA0259.1	0.981

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13207

Novel motif	Logo	P-value
1	1	0.101
10	10	0.0232
100	100	0.919
101	101	0.34
102	102	0.414
103	103	0.266
104	104	0.648
105	105	0.285
106	106	0.00816
107	107	0.629
108	108	0.905
109	109	0.025
11	11	0.147
110	110	0.192
111	111	0.0176
112	112	0.164
113	113	0.513
114	114	0.00287
115	115	0.436
116	116	0.981
117	117	0.019
118	118	0.0982
119	119	0.172
12	12	0.354
120	120	0.53
121	121	0.95
122	122	0.863
123	123	4.08119e-4
124	124	0.474
125	125	0.0486
126	126	0.156
127	127	0.294
128	128	0.0639
129	129	0.967
13	13	0.0979
130	130	0.268
131	131	0.973
132	132	0.0541
133	133	0.0537
134	134	0.671
135	135	0.191
136	136	0.631
137	137	3.73245e-4
138	138	0.259
139	139	0.0139
14	14	0.318
140	140	0.271
141	141	0.723
142	142	0.921
143	143	0.0992
144	144	0.914
145	145	0.33
146	146	0.791
147	147	0.347
148	148	0.0298
149	149	0.619
15	15	0.108
150	150	0.48
151	151	0.24
152	152	0.222
153	153	0.459
154	154	0.793
155	155	0.0397
156	156	0.883
157	157	0.95
158	158	0.144
159	159	0.376
16	16	0.394
160	160	0.515
161	161	0.416
162	162	0.699
163	163	0.246
164	164	0.123
165	165	0.0379
166	166	0.295
167	167	0.0742
168	168	0.649
169	169	0.0166
17	17	0.345
18	18	0.196
19	19	0.281
2	2	0.803
20	20	0.49
21	21	0.412
22	22	0.253
23	23	0.336
24	24	0.332
25	25	0.125
26	26	0.0621
27	27	0.459
28	28	0.535
29	29	0.0652
3	3	0.0601
30	30	0.368
31	31	0.602
32	32	0.823
33	33	0.235
34	34	0.576
35	35	0.159
36	36	0.0513
37	37	0.0488
38	38	0.515
39	39	0.645
4	4	0.904
40	40	0.194
41	41	0.0743
42	42	0.279
43	43	0.0723
44	44	0.448
45	45	0.866
46	46	0.105
47	47	0.314
48	48	0.338
49	49	0.0877
5	5	0.133
50	50	0.995
51	51	0.394
52	52	0.347
53	53	0.318
54	54	0.417
55	55	0.407
56	56	0.769
57	57	0.752
58	58	0.027
59	59	0.119
6	6	0.994
60	60	0.0344
61	61	0.172
62	62	0.00662
63	63	0.48
64	64	0.342
65	65	0.374
66	66	0.268
67	67	0.217
68	68	0.983
69	69	0.509
7	7	0.147
70	70	0.0165
71	71	0.0436
72	72	0.299
73	73	0.129
74	74	0.494
75	75	0.0336
76	76	0.293
77	77	0.585
78	78	0.226
79	79	0.254
8	8	0.241
80	80	0.373
81	81	0.176
82	82	0.122
83	83	0.936
84	84	0.786
85	85	0.0501
86	86	0.0973
87	87	0.176
88	88	0.47
89	89	0.821
9	9	0.307
90	90	0.0815
91	91	0.43
92	92	0.385
93	93	0.399
94	94	0.015
95	95	0.0516
96	96	0.311
97	97	0.929
98	98	0.146
99	99	0.0808

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13207

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011100 human CD14-CD16-positive Monocytes sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000875 (non-classical monocyte)
0002396 (CD14-low, CD16-positive monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011100 (human CD14-CD16-positive Monocytes sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
+|DRA_sample_Accession=CAGE@SAMD00005837
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000875,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371,CL:0002393,CL:0002396,CL:0002397
+|accession_numbers=CAGE;DRX008168;DRR009040;DRZ000465;DRZ001850;DRZ011815;DRZ013200
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000875,CL:0002396
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011100
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.67!466.46!SPI1;;chr2:68592406..68592424,+!p1@PLEK!2.61!407.98!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!2.07!117.56!IKZF1;;chr11:47399947..47399961,-!p3@SPI1!2.06!112.59!SPI1;;chr11:47400062..47400077,-!p2@SPI1!1.96!89.31!SPI1;;chr16:85932760..85932775,+!p1@IRF8!1.83!66.84!IRF8;;chr12:54778351..54778378,-!p6@ZNF385A!1.81!64.25!ZNF385A;;chr19:13213662..13213686,-!p1@LYL1!1.77!84.74!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.75!54.90!OLIG1;;chr5:176735063..176735088,-!p2@MXD3!1.71!49.93!MXD3;;chr2:145277640..145277771,-!p1@ZEB2!1.67!586.21!ZEB2;;chr11:47399996..47400014,-!p4@SPI1!1.67!45.95!SPI1;;chr20:39317868..39317884,-!p1@MAFB!1.66!503.26!MAFB;;chr11:47399920..47399931,-!p7@SPI1!1.63!41.57!SPI1;;chr21:34442540..34442560,+!p2@OLIG1!1.63!41.37!OLIG1;;chr19:33793430..33793447,-!p1@CEBPA!1.62!163.11!CEBPA;;chr11:47400032..47400043,-!p5@SPI1!1.62!40.58!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!1.57!35.81!ZNF385A;;chrX:106960180..106960197,-!p2@TSC22D3!1.55!127.90!TSC22D3;;chr19:16435625..16435682,+!p1@KLF2!1.49!913.82!KLF2;;chr11:47400045..47400060,-!p6@SPI1!1.49!29.64!SPI1;;chr1:25256756..25256774,-!p1@RUNX3!1.44!49.13!RUNX3;;chr19:42636586..42636607,-!p1@POU2F2!1.42!67.63!POU2F2;;chr7:128577972..128578047,+!p1@IRF5!1.42!38.99!IRF5;;chr5:88178983..88179012,-!p1@MEF2C!1.41!184.99!MEF2C;;chr1:212873084..212873137,-!p2@BATF3!1.41!24.47!BATF3;;chr9:110252035..110252057,-!p1@KLF4!1.33!315.28!KLF4;;chr14:75745523..75745537,+!p1@FOS!1.32!2285.75!FOS;;chr3:101568349..101568365,+!p1@NFKBIZ!1.32!995.18!NFKBIZ;;chr10:114710098..114710130,+!p2@TCF7L2!1.32!145.21!TCF7L2;;chr10:94449703..94449718,+!p1@HHEX!1.31!74.39!HHEX;;chr2:68592394..68592405,+!p2@PLEK!1.31!19.29!PLEK;;chr9:110250697..110250738,-!p2@KLF4!1.30!22.28!KLF4;;chr10:51572408..51572454,+!p3@NCOA4!1.29!106.82!NCOA4;;chrX:106960221..106960236,-!p3@TSC22D3!1.29!50.52!TSC22D3;;chr7:50343634..50343717,+!p2@IKZF1!1.29!18.70!IKZF1;;chrX:106960249..106960260,-!p5@TSC22D3!1.27!27.85!TSC22D3;;chrY:21906594..21906622,-!p1@KDM5D!1.27!17.70!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.27!17.50!SP140;;chr10:114709999..114710031,+!p1@TCF7L2!1.24!378.54!TCF7L2;;chr11:128563948..128564003,+!p1@FLI1!1.24!192.95!FLI1;;chrX:106960285..106960299,-!p1@TSC22D3!1.22!405.39!TSC22D3;;chr1:935467..935484,-!p1@HES4!1.20!64.65!HES4;;chr1:25256439..25256476,-!p3@RUNX3!1.20!14.72!RUNX3;;chr2:28618532..28618610,+!p4@FOSL2!1.19!24.67!FOSL2;;chr12:72056800..72056834,+!p1@THAP2!1.18!19.10!THAP2;;chr2:145271342..145271377,-!p5@ZEB2!1.18!14.12!ZEB2;;chr10:3827371..3827386,-!p2@KLF6!1.17!115.37!KLF6;;chr20:48807456..48807475,+!p3@CEBPB!1.17!26.65!CEBPB;;chr2:208394817..208394834,+!p3@CREB1!1.16!53.51!CREB1;;chr19:12902289..12902307,+!p1@JUNB!1.14!2910.55!JUNB;;chr12:52445218..52445237,+!p1@NR4A1!1.13!155.95!NR4A1;;chr13:41593425..41593480,-!p1@ELF1!1.13!79.17!ELF1;;chr12:54694758..54694805,-!p1@NFE2!1.12!14.92!NFE2;;chr10:114710244..114710257,+!p3@TCF7L2!1.11!32.42!TCF7L2;;chr2:208031943..208031978,-!p5@KLF7!1.11!15.91!KLF7;;chr1:212873061..212873080,-!p4@BATF3!1.11!11.94!BATF3;;chr2:238600933..238600985,+!p3@LRRFIP1!1.09!61.86!LRRFIP1;;chr4:185395633..185395651,-!p2@IRF2!1.09!18.30!IRF2;;chr2:70142232..70142251,+!p1@MXD1!1.08!63.06!MXD1;;chr19:45579725..45579743,-!p1@ZNF296!1.08!49.73!ZNF296;;chr8:71316428..71316459,-!p2@NCOA2!1.05!17.11!NCOA2;;chr14:75746722..75746777,+!p2@FOS!1.05!13.13!FOS;;chr9:135854091..135854159,+!p1@GFI1B!1.05!10.34!GFI1B;;chr15:90544182..90544195,+!p7@ZNF710!1.05!10.14!ZNF710;;chr2:61108695..61108753,+!p1@REL!1.04!69.22!REL;;chr10:94449675..94449694,+!p2@HHEX!1.04!26.85!HHEX;;chr6:391743..391759,+!p1@IRF4!1.03!9.75!IRF4;;chr19:45971246..45971265,+!p1@FOSB!1.02!181.01!FOSB;;chr9:137217986..137218049,+!p3@RXRA!1.02!27.65!RXRA;;chr4:38665810..38665827,+!p1@KLF3!1.01!138.25!KLF3;;chr7:77428066..77428132,+!p2@PHTF2!1.01!60.47!PHTF2;;chr10:114710060..114710069,+!p5@TCF7L2!1.01!15.91!TCF7L2;;chrY:2803415..2803468,+!p1@ZFY!1.01!9.35!ZFY;;chr21:30671690..30671762,+!p2@BACH1!1.00!31.23!BACH1;;chr7:50344251..50344288,+!p3@IKZF1!1.00!8.95!IKZF1;;chr1:935398..935465,-!p2@HES4!0.99!18.50!HES4;;chr6:144385698..144385742,-!p2@PLAGL1!0.99!10.74!PLAGL1;;chr17:38497662..38497713,+!p4@RARA!0.99!10.14!RARA;;chr5:131826457..131826514,-!p1@IRF1!0.98!345.32!IRF1;;chr4:185395191..185395226,-!p4@IRF2!0.98!12.13!IRF2;;chr7:115670804..115670825,-!p1@TFEC!0.98!8.55!TFEC;;chr8:37553292..37553317,+!p1@ZNF703!0.97!203.09!ZNF703;;chr4:185395590..185395627,-!p3@IRF2!0.97!10.54!IRF2;;chr2:231084659..231084721,-!p1@SP110!0.96!196.93!SP110;;chr21:30672433..30672464,+!p6@BACH1!0.96!8.16!BACH1;;chr10:135044190..135044229,+!p3@UTF1!0.96!8.16!UTF1;;chr4:106068026..106068084,+!p1@TET2!0.94!72.41!TET2;;chr14:45722360..45722415,-!p1@MIS18BP1!0.93!121.34!MIS18BP1;;chr10:35416142..35416169,+!p3@CREM!0.93!20.49!CREM;;chr10:114710218..114710229,+!p4@TCF7L2!0.93!15.12!TCF7L2;;chr1:158978768..158978800,+!p8@IFI16!0.93!7.56!IFI16;;chr9:110252074..110252079,-!p3@KLF4!0.92!12.33!KLF4;;chr2:231090471..231090504,+!p2@SP140!0.92!7.36!SP140;;chr4:38665769..38665801,+!p2@KLF3!0.91!67.43!KLF3;;chr9:110251836..110251887,-!p4@KLF4!0.91!9.55!KLF4;;chr19:42627037..42627084,-!p3@POU2F2!0.91!7.16!POU2F2;;chr9:117150254..117150271,-!p1@AKNA!0.90!19.89!AKNA;;chr20:48807615..48807644,+!p6@CEBPB!0.90!11.74!CEBPB;;chr20:48807430..48807439,+!p8@CEBPB!0.90!10.74!CEBPB;;chr18:51751066..51751077,-!p6@MBD2!0.90!10.74!MBD2;;chr17:38498402..38498445,+!p3@RARA!0.89!25.46!RARA;;chr20:48807351..48807384,+!p1@CEBPB!0.88!717.09!CEBPB;;chrX:129244454..129244488,-!p1@ELF4!0.88!50.72!ELF4;;chr2:157189180..157189290,-!p1@NR4A2!0.88!36.20!NR4A2;;chr5:88179017..88179046,-!p2@MEF2C!0.88!27.85!MEF2C;;chr21:30671235..30671253,+!p1@BACH1!0.87!86.13!BACH1;;chr1:161014760..161014788,-!p4@USF1!0.86!6.17!USF1;;chr22:21771656..21771662,+!p1@HIC2!0.86!6.17!HIC2;;chr19:16435735..16435773,+!p4@KLF2!0.86!6.17!KLF2;;chr10:104154246..104154347,+!p3@NFKB2!0.85!39.98!NFKB2;;chr19:49140609..49140643,-!p1@DBP!0.85!36.40!DBP;;chr17:38256799..38256815,-!p3@NR1D1!0.85!11.34!NR1D1;;chr1:935496..935509,-!p3@HES4!0.85!9.55!HES4;;chr16:31885093..31885165,+!p1@ZNF267!0.84!96.28!ZNF267;;chr10:114710083..114710092,+!p8@TCF7L2!0.84!8.16!TCF7L2;;chr2:238600998..238601013,+!p5@LRRFIP1!0.84!5.97!LRRFIP1;;chrX:129244840..129244881,-!p2@ELF4!0.83!23.47!ELF4;;chr5:172483347..172483407,+!p1@C5orf41!0.82!45.15!CREBRF;;chr11:615942..615957,-!p1@IRF7!0.81!55.70!IRF7;;chr8:48650697..48650708,-!p2@CEBPD!0.81!45.15!CEBPD;;chr17:38498594..38498661,+!p2@RARA!0.81!19.69!RARA;;chr14:64971288..64971316,-!p2@ZBTB25!0.81!17.90!ZBTB25;;chr12:72056773..72056796,+!p3@THAP2!0.81!7.36!THAP2;;chr18:51750948..51751059,-!p1@MBD2!0.80!183.20!MBD2;;chr9:88969303..88969335,-!p1@ZCCHC6!0.80!53.71!ZCCHC6;;chr17:40440481..40440550,+!p1@STAT5A!0.80!41.77!STAT5A;;chr2:157198916..157198978,-!p2@NR4A2!0.80!20.09!NR4A2;;chr18:77155922..77155939,+!p1@NFATC1!0.80!15.32!NFATC1;;chr2:176033066..176033087,-!p2@ATF2!0.80!6.96!ATF2;;chr6:44355499..44355514,+!p3@CDC5L!0.80!5.97!CDC5L;;chrX:70712265..70712303,+!p4@TAF1!0.80!5.37!TAF1;;chr2:145275982..145276003,-!p7@ZEB2!0.80!5.37!ZEB2;;chr10:114886551..114886601,+!p11@TCF7L2!0.80!5.37!TCF7L2;;chr6:12011943..12012015,+!p2@HIVEP1!0.79!17.90!HIVEP1;;chr1:158979872..158979898,+!p3@IFI16!0.79!16.91!IFI16;;chr18:42260030..42260055,+!p3@SETBP1!0.79!6.56!SETBP1;;chr8:71316021..71316068,-!p1@NCOA2!0.78!51.12!NCOA2;;chr3:150126904..150126958,+!p7@TSC22D2!0.78!9.15!TSC22D2;;chr19:13213954..13214021,-!p4@LYL1!0.78!4.97!LYL1;;chr6:170862932..170862947,+!p5@TBP!0.78!4.97!TBP;;chr6:130339710..130339745,+!p1@L3MBTL3!0.77!42.37!L3MBTL3;;chr3:39195075..39195088,-!p1@CSRNP1!0.77!33.82!CSRNP1;;chr6:28092375..28092412,+!p1@ZSCAN16!0.77!22.48!ZSCAN16;;chr5:142782823..142782854,-!p3@NR3C1!0.77!7.16!NR3C1;;chr2:10183651..10183713,+!p1@KLF11!0.76!37.99!KLF11;;chr2:61108808..61108821,+!p3@REL!0.76!6.17!REL;;chr2:60780607..60780624,-!p2@BCL11A!0.75!15.32!BCL11A;;chr16:3313791..3313834,+!p2@ZNF263!0.75!10.94!ZNF263;;chr9:88969287..88969297,-!p3@ZCCHC6!0.75!6.37!ZCCHC6;;chr12:54694807..54694832,-!p3@NFE2!0.75!4.58!NFE2;;chr2:231090344..231090361,-!p3@SP110!0.75!4.58!SP110;;chr2:61108650..61108687,+!p2@REL!0.74!24.27!REL;;chr1:158979851..158979865,+!p5@IFI16!0.74!10.54!IFI16;;chr9:102584262..102584276,+!p1@NR4A3!0.73!10.54!NR4A3;;chr2:145282041..145282092,-!p8@ZEB2!0.73!6.96!ZEB2;;chr12:108154762..108154776,-!p4@PRDM4!0.73!4.38!PRDM4;;chr13:41593392..41593403,-!p7@ELF1!0.73!4.38!ELF1;;chr6:44233252..44233296,-!p1@NFKBIE!0.72!46.94!NFKBIE;;chr1:156470515..156470542,-!p2@MEF2D!0.72!24.86!MEF2D;;chr19:12405606..12405629,-!p2@ZNF44!0.72!8.95!ZNF44;;chr2:145274981..145274994,-!p9@ZEB2!0.72!6.56!ZEB2;;chr20:48807875..48807982,+!p2@CEBPB!0.71!103.24!CEBPB;;chr11:65686952..65686975,+!p5@DRAP1!0.71!25.66!DRAP1;;chr14:35872962..35873025,-!p3@NFKBIA!0.71!11.34!NFKBIA;;chr10:51572339..51572376,+!p4@NCOA4!0.71!10.14!NCOA4;;chr2:185463247..185463263,+!p1@ZNF804A!0.71!7.76!ZNF804A;;chr11:615570..615721,-!p2@IRF7!0.70!8.55!IRF7;;chr2:145277882..145277967,-!p3@ZEB2!0.70!7.36!ZEB2;;chr2:145277589..145277612,-!p12@ZEB2!0.70!3.98!ZEB2;;chr20:56195474..56195506,-!p1@ZBP1!0.70!3.98!ZBP1;;chr13:41593405..41593416,-!p9@ELF1!0.70!3.98!ELF1;;chr13:41240737..41240787,-!p1@FOXO1!0.69!52.71!FOXO1;;chr9:88969339..88969422,-!p2@ZCCHC6!0.69!34.41!ZCCHC6;;chrX:131623044..131623089,-!p1@MBNL3!0.69!18.10!MBNL3;;chr21:40177892..40177903,+!p2@ETS2!0.69!17.70!ETS2;;chr19:12075844..12075880,+!p3@ZNF763!0.69!7.16!ZNF763;;chr20:48807648..48807671,+!p9@CEBPB!0.69!5.97!CEBPB;;chr1:44679370..44679422,+!p3@DMAP1!0.69!5.37!DMAP1;;chr18:51750414..51750449,-!p5@MBD2!0.68!7.96!MBD2;;chr11:113930291..113930339,+!p2@ZBTB16!0.68!6.56!ZBTB16;;chr19:4067174..4067200,-!p9@ZBTB7A!0.68!4.77!ZBTB7A;;chr2:145274998..145275012,-!p13@ZEB2!0.68!4.38!ZEB2;;chr14:75746340..75746368,+!p3@FOS!0.68!3.78!FOS;;chrY:21906761..21906810,-!p2@KDM5D!0.68!3.78!KDM5D;;chr2:8822176..8822196,+!p1@ID2!0.67!605.10!ID2;;chr6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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002396;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
+|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14-CD16%252b%2520Monocytes%252c%2520donor2.CNhs13207.11800-124C9.hg38.nobarcode.ctss.bed.gz
 |id=FF:11800-124C9
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0011100
+|is_a=EFO:0002091;;FF:0011100
+|is_obsolete=
+|library_id=CNhs13207
+|library_id_phase_based=2:CNhs13207
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11800
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11800
 |name=CD14-CD16+ Monocytes, donor2
 |namespace=
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs13207,LSID1004,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=124
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=1.1296
 |sample_age=23
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.19523474238604e-214!GO:0043227;membrane-bound organelle;9.69706743274033e-166!GO:0043231;intracellular membrane-bound organelle;1.8746851413335e-165!GO:0043226;organelle;4.1749580591545e-154!GO:0043229;intracellular organelle;2.12501477405372e-153!GO:0005737;cytoplasm;7.90506179987115e-144!GO:0044444;cytoplasmic part;4.65269975354579e-101!GO:0044422;organelle part;8.24999385684196e-98!GO:0044446;intracellular organelle part;3.96422150983678e-96!GO:0044237;cellular metabolic process;3.65237459789254e-86!GO:0032991;macromolecular complex;1.63612705645531e-84!GO:0044238;primary metabolic process;2.85659637657777e-82!GO:0043170;macromolecule metabolic process;7.52075026747028e-81!GO:0030529;ribonucleoprotein complex;4.54920001062909e-76!GO:0005634;nucleus;1.58188582252314e-70!GO:0003723;RNA binding;2.39407369852459e-68!GO:0044428;nuclear part;1.35662661209188e-61!GO:0005739;mitochondrion;2.45380453116436e-58!GO:0043233;organelle lumen;2.13147449387558e-55!GO:0031974;membrane-enclosed lumen;2.13147449387558e-55!GO:0006412;translation;5.66684001562791e-53!GO:0005515;protein binding;2.59177367020347e-49!GO:0019538;protein metabolic process;8.677808271252e-48!GO:0010467;gene expression;1.00304850095276e-46!GO:0043283;biopolymer metabolic process;1.86169838493673e-46!GO:0044267;cellular protein metabolic process;1.81095516343878e-45!GO:0044260;cellular macromolecule metabolic process;1.85130522648031e-45!GO:0033036;macromolecule localization;4.41500869293974e-45!GO:0015031;protein transport;3.78977084401676e-44!GO:0006396;RNA processing;9.97377721396572e-44!GO:0005840;ribosome;1.50264103373652e-43!GO:0045184;establishment of protein localization;1.53584384952751e-43!GO:0008104;protein localization;5.23023825439738e-42!GO:0043234;protein complex;8.13226443958366e-42!GO:0009059;macromolecule biosynthetic process;3.71897236685097e-40!GO:0044429;mitochondrial part;1.61705937385384e-39!GO:0003735;structural constituent of ribosome;7.37604443780758e-39!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.1593744485731e-38!GO:0016071;mRNA metabolic process;3.17052253203066e-38!GO:0031090;organelle membrane;2.10670312101678e-37!GO:0005829;cytosol;1.26403304105438e-36!GO:0031981;nuclear lumen;2.25407388466451e-36!GO:0031967;organelle envelope;6.0296495438249e-36!GO:0008380;RNA splicing;7.64602224737802e-36!GO:0033279;ribosomal subunit;8.41174547947848e-36!GO:0031975;envelope;1.25496762466874e-35!GO:0044249;cellular biosynthetic process;1.72177359149143e-35!GO:0009058;biosynthetic process;1.39695782197858e-34!GO:0006397;mRNA processing;7.804080974913e-34!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.01520122810864e-29!GO:0016043;cellular component organization and biogenesis;1.21219648916905e-27!GO:0046907;intracellular transport;1.52367543234319e-27!GO:0006886;intracellular protein transport;1.52801436682961e-27!GO:0003676;nucleic acid binding;5.71472469794091e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.25068383553699e-26!GO:0005681;spliceosome;1.34553101588319e-26!GO:0005740;mitochondrial envelope;3.70116014846434e-26!GO:0065003;macromolecular complex assembly;1.30862947657733e-25!GO:0031966;mitochondrial membrane;3.86482003406627e-25!GO:0005654;nucleoplasm;1.19776241866696e-24!GO:0044445;cytosolic part;3.87719865871621e-24!GO:0019866;organelle inner membrane;4.4542290989711e-24!GO:0006119;oxidative phosphorylation;1.58560615343653e-22!GO:0000166;nucleotide binding;5.06961983781093e-22!GO:0005743;mitochondrial inner membrane;5.22105241441258e-22!GO:0022607;cellular component assembly;1.73926494043602e-21!GO:0051649;establishment of cellular localization;9.1346682521608e-21!GO:0016070;RNA metabolic process;1.14827461005942e-20!GO:0006259;DNA metabolic process;3.60400313418182e-20!GO:0051641;cellular localization;3.7334278837843e-20!GO:0044455;mitochondrial membrane part;4.60688273563211e-20!GO:0044451;nucleoplasm part;7.17426165011797e-20!GO:0006996;organelle organization and biogenesis;2.72138446877742e-19!GO:0022618;protein-RNA complex assembly;3.99697277131047e-19!GO:0006915;apoptosis;6.37885775146384e-19!GO:0012501;programmed cell death;7.78197324541002e-19!GO:0015935;small ribosomal subunit;1.13215435546247e-18!GO:0006512;ubiquitin cycle;2.17617282194938e-18!GO:0015934;large ribosomal subunit;4.24461324398003e-18!GO:0044265;cellular macromolecule catabolic process;9.6249761872961e-18!GO:0008219;cell death;2.20295725285397e-17!GO:0016265;death;2.20295725285397e-17!GO:0016874;ligase activity;7.41005266663061e-17!GO:0008134;transcription factor binding;1.03496552143053e-16!GO:0043412;biopolymer modification;2.17856074917634e-16!GO:0031980;mitochondrial lumen;2.85918326957738e-16!GO:0005759;mitochondrial matrix;2.85918326957738e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.13788910353542e-16!GO:0017111;nucleoside-triphosphatase activity;4.55287123813826e-16!GO:0016462;pyrophosphatase activity;5.0366868625407e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;5.1021690933034e-16!GO:0032553;ribonucleotide binding;5.7108386202205e-16!GO:0032555;purine ribonucleotide binding;5.7108386202205e-16!GO:0005746;mitochondrial respiratory chain;6.01743463708629e-16!GO:0017076;purine nucleotide binding;9.43856060726913e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.71901005808764e-15!GO:0044248;cellular catabolic process;3.09953748595438e-15!GO:0008135;translation factor activity, nucleic acid binding;3.99807917255892e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.92820949446211e-15!GO:0016604;nuclear body;5.05821511160167e-15!GO:0019941;modification-dependent protein catabolic process;6.1855700259261e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.1855700259261e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;6.39527978858628e-15!GO:0044257;cellular protein catabolic process;1.23153443317814e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.2511689821371e-14!GO:0006464;protein modification process;1.7694837483223e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.07932938573632e-14!GO:0003954;NADH dehydrogenase activity;2.07932938573632e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.07932938573632e-14!GO:0006605;protein targeting;2.48604585906569e-14!GO:0016192;vesicle-mediated transport;3.05047764500439e-14!GO:0043285;biopolymer catabolic process;4.06650848635329e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.64779938659528e-14!GO:0051186;cofactor metabolic process;6.07909187591208e-14!GO:0009057;macromolecule catabolic process;7.36686240725534e-14!GO:0006457;protein folding;1.44367879759375e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.45061387430676e-13!GO:0043228;non-membrane-bound organelle;2.36093736978876e-13!GO:0043232;intracellular non-membrane-bound organelle;2.36093736978876e-13!GO:0043687;post-translational protein modification;2.56234527092091e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.47708265502835e-13!GO:0042773;ATP synthesis coupled electron transport;4.47708265502835e-13!GO:0005524;ATP binding;1.10719757424579e-12!GO:0005730;nucleolus;1.13132535781449e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.13132535781449e-12!GO:0045271;respiratory chain complex I;1.13132535781449e-12!GO:0005747;mitochondrial respiratory chain complex I;1.13132535781449e-12!GO:0016607;nuclear speck;1.26608854800262e-12!GO:0006974;response to DNA damage stimulus;1.36002634811227e-12!GO:0006413;translational initiation;1.51007774537593e-12!GO:0032559;adenyl ribonucleotide binding;1.91342501198245e-12!GO:0048770;pigment granule;2.56129855898581e-12!GO:0042470;melanosome;2.56129855898581e-12!GO:0003743;translation initiation factor activity;3.12762038462394e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.36904820242753e-12!GO:0030554;adenyl nucleotide binding;4.00150672222396e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;4.399061699046e-12!GO:0000375;RNA splicing, via transesterification reactions;4.399061699046e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.399061699046e-12!GO:0006913;nucleocytoplasmic transport;6.09251096335925e-12!GO:0012505;endomembrane system;8.75193111634563e-12!GO:0051169;nuclear transport;1.13728997071815e-11!GO:0005773;vacuole;1.51286007642624e-11!GO:0006732;coenzyme metabolic process;2.13633285859701e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.73286291351912e-11!GO:0042981;regulation of apoptosis;3.03504732566225e-11!GO:0006446;regulation of translational initiation;4.6826776927085e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;4.69681521573495e-11!GO:0043067;regulation of programmed cell death;5.33151248534434e-11!GO:0005761;mitochondrial ribosome;5.66936468744766e-11!GO:0000313;organellar ribosome;5.66936468744766e-11!GO:0016787;hydrolase activity;6.55948939698816e-11!GO:0000323;lytic vacuole;9.01510548822295e-11!GO:0005764;lysosome;9.01510548822295e-11!GO:0030163;protein catabolic process;1.20079580968767e-10!GO:0008639;small protein conjugating enzyme activity;1.40533120867713e-10!GO:0006323;DNA packaging;1.55748009936661e-10!GO:0003712;transcription cofactor activity;1.83522073968632e-10!GO:0016887;ATPase activity;2.01482440270308e-10!GO:0006793;phosphorus metabolic process;2.69290712856688e-10!GO:0006796;phosphate metabolic process;2.69290712856688e-10!GO:0042623;ATPase activity, coupled;2.90676010438767e-10!GO:0050794;regulation of cellular process;3.05363163941266e-10!GO:0004842;ubiquitin-protein ligase activity;3.06931731261023e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.97776167369659e-10!GO:0006281;DNA repair;4.48882223290102e-10!GO:0005635;nuclear envelope;5.17045727894391e-10!GO:0005794;Golgi apparatus;5.78796600491541e-10!GO:0019787;small conjugating protein ligase activity;9.05765771439457e-10!GO:0009259;ribonucleotide metabolic process;9.15656423185807e-10!GO:0048193;Golgi vesicle transport;1.11087141046996e-09!GO:0005768;endosome;1.15367048051595e-09!GO:0051276;chromosome organization and biogenesis;1.17780484428717e-09!GO:0006163;purine nucleotide metabolic process;1.29753482843967e-09!GO:0006164;purine nucleotide biosynthetic process;1.40287323893795e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.64546544562092e-09!GO:0007049;cell cycle;1.64546544562092e-09!GO:0009150;purine ribonucleotide metabolic process;1.66548270692744e-09!GO:0051246;regulation of protein metabolic process;1.84228345485704e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.0288334936184e-09!GO:0015078;hydrogen ion transmembrane transporter activity;2.06454448700238e-09!GO:0009260;ribonucleotide biosynthetic process;2.63795557656304e-09!GO:0051082;unfolded protein binding;3.611431066882e-09!GO:0004386;helicase activity;4.1138327533717e-09!GO:0017038;protein import;4.13136870279145e-09!GO:0042254;ribosome biogenesis and assembly;4.97520289184726e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.11760192678562e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.37745308372955e-09!GO:0016310;phosphorylation;6.43213679998251e-09!GO:0019829;cation-transporting ATPase activity;6.83149014145378e-09!GO:0008565;protein transporter activity;8.49601254931153e-09!GO:0009056;catabolic process;9.11712194130842e-09!GO:0015986;ATP synthesis coupled proton transport;9.40532820001628e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.40532820001628e-09!GO:0008026;ATP-dependent helicase activity;1.29178323489764e-08!GO:0044453;nuclear membrane part;1.51490380018943e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.53972150728616e-08!GO:0031965;nuclear membrane;1.81497012613258e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.17059382049647e-08!GO:0007243;protein kinase cascade;2.17525158818964e-08!GO:0016568;chromatin modification;2.25271392158817e-08!GO:0016469;proton-transporting two-sector ATPase complex;3.38734343826368e-08!GO:0050657;nucleic acid transport;3.41462365562898e-08!GO:0051236;establishment of RNA localization;3.41462365562898e-08!GO:0050658;RNA transport;3.41462365562898e-08!GO:0065009;regulation of a molecular function;3.4703120583057e-08!GO:0006366;transcription from RNA polymerase II promoter;4.02351345202885e-08!GO:0051188;cofactor biosynthetic process;4.2036196159171e-08!GO:0009060;aerobic respiration;4.75374208461926e-08!GO:0016881;acid-amino acid ligase activity;4.75979448906543e-08!GO:0065002;intracellular protein transport across a membrane;5.40561685523237e-08!GO:0006403;RNA localization;5.64927277895958e-08!GO:0019222;regulation of metabolic process;5.65588546363321e-08!GO:0005643;nuclear pore;5.98380000004777e-08!GO:0009719;response to endogenous stimulus;6.91608084867001e-08!GO:0006754;ATP biosynthetic process;7.46957008599085e-08!GO:0006753;nucleoside phosphate metabolic process;7.46957008599085e-08!GO:0005783;endoplasmic reticulum;8.17457809381724e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.47015010832461e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.47015010832461e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.66344822992809e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.66344822992809e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.7051717018939e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.15118125020532e-07!GO:0009055;electron carrier activity;1.31849549300556e-07!GO:0043566;structure-specific DNA binding;1.59003194460568e-07!GO:0007242;intracellular signaling cascade;1.6516597230773e-07!GO:0005694;chromosome;1.7400801660389e-07!GO:0051726;regulation of cell cycle;1.9729120434573e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.98781888818447e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.98781888818447e-07!GO:0048523;negative regulation of cellular process;2.01710892959441e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.15121694188062e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.44441331798313e-07!GO:0000074;regulation of progression through cell cycle;2.88474740140209e-07!GO:0046034;ATP metabolic process;3.05740825844089e-07!GO:0006399;tRNA metabolic process;3.31233649331246e-07!GO:0009141;nucleoside triphosphate metabolic process;3.40815401700688e-07!GO:0003713;transcription coactivator activity;3.79590094620585e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.10723097867033e-07!GO:0045333;cellular respiration;4.13442477201767e-07!GO:0006417;regulation of translation;4.46903719907585e-07!GO:0004298;threonine endopeptidase activity;4.99070507966619e-07!GO:0009108;coenzyme biosynthetic process;5.12654351496056e-07!GO:0030532;small nuclear ribonucleoprotein complex;5.46796301025316e-07!GO:0045786;negative regulation of progression through cell cycle;5.46796301025316e-07!GO:0050789;regulation of biological process;5.71173663027463e-07!GO:0005770;late endosome;6.75115451428094e-07!GO:0051170;nuclear import;7.64045611957511e-07!GO:0051028;mRNA transport;7.78500350556415e-07!GO:0003697;single-stranded DNA binding;8.03828391743719e-07!GO:0046930;pore complex;9.69913849640147e-07!GO:0009615;response to virus;1.14430484128862e-06!GO:0022402;cell cycle process;1.18531958673568e-06!GO:0031324;negative regulation of cellular metabolic process;1.21571723289844e-06!GO:0044432;endoplasmic reticulum part;1.37137968704522e-06!GO:0016072;rRNA metabolic process;1.38936976133273e-06!GO:0032446;protein modification by small protein conjugation;1.38936976133273e-06!GO:0006606;protein import into nucleus;1.63222898852616e-06!GO:0006333;chromatin assembly or disassembly;2.04936455789254e-06!GO:0006364;rRNA processing;2.52000586809823e-06!GO:0045259;proton-transporting ATP synthase complex;2.53253515349494e-06!GO:0031323;regulation of cellular metabolic process;2.54883933150348e-06!GO:0016567;protein ubiquitination;2.66364712978249e-06!GO:0065004;protein-DNA complex assembly;2.94568740300159e-06!GO:0006099;tricarboxylic acid cycle;3.35198005141285e-06!GO:0046356;acetyl-CoA catabolic process;3.35198005141285e-06!GO:0009117;nucleotide metabolic process;3.67045947050698e-06!GO:0043065;positive regulation of apoptosis;3.79875799347736e-06!GO:0008047;enzyme activator activity;3.83390304192238e-06!GO:0006461;protein complex assembly;4.01349272765034e-06!GO:0044427;chromosomal part;4.18551478115998e-06!GO:0048519;negative regulation of biological process;4.19718428145539e-06!GO:0043069;negative regulation of programmed cell death;4.38883802617206e-06!GO:0016740;transferase activity;4.51770726992741e-06!GO:0006752;group transfer coenzyme metabolic process;4.77970706009085e-06!GO:0051187;cofactor catabolic process;4.94977719023234e-06!GO:0006084;acetyl-CoA metabolic process;5.12125788369045e-06!GO:0043066;negative regulation of apoptosis;5.17014328098772e-06!GO:0016564;transcription repressor activity;5.2382507705165e-06!GO:0043068;positive regulation of programmed cell death;5.65114207744932e-06!GO:0016563;transcription activator activity;5.78150912408319e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.80339347566111e-06!GO:0000151;ubiquitin ligase complex;6.16562231292599e-06!GO:0000245;spliceosome assembly;7.15006633947602e-06!GO:0005525;GTP binding;7.29862720722604e-06!GO:0007264;small GTPase mediated signal transduction;7.3960003998421e-06!GO:0016779;nucleotidyltransferase activity;9.29203657088456e-06!GO:0005793;ER-Golgi intermediate compartment;1.02308692221092e-05!GO:0019899;enzyme binding;1.026627179983e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.02917282213323e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.02917282213323e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.02917282213323e-05!GO:0031326;regulation of cellular biosynthetic process;1.03742795295599e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.06937232688318e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.10455958220244e-05!GO:0005789;endoplasmic reticulum membrane;1.11615804531359e-05!GO:0048475;coated membrane;1.18488868087554e-05!GO:0030117;membrane coat;1.18488868087554e-05!GO:0007005;mitochondrion organization and biogenesis;1.19005951591073e-05!GO:0050790;regulation of catalytic activity;1.20668407511585e-05!GO:0006917;induction of apoptosis;1.25444384911057e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.26012063501092e-05!GO:0005774;vacuolar membrane;1.41616563516232e-05!GO:0006916;anti-apoptosis;1.46316723764907e-05!GO:0030120;vesicle coat;1.62203607912022e-05!GO:0030662;coated vesicle membrane;1.62203607912022e-05!GO:0012502;induction of programmed cell death;1.9065868545097e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.91019327221985e-05!GO:0043038;amino acid activation;1.91971879786869e-05!GO:0006418;tRNA aminoacylation for protein translation;1.91971879786869e-05!GO:0043039;tRNA aminoacylation;1.91971879786869e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.17288330050414e-05!GO:0009109;coenzyme catabolic process;2.39652122060515e-05!GO:0016481;negative regulation of transcription;2.79452153002855e-05!GO:0006613;cotranslational protein targeting to membrane;2.81184332550644e-05!GO:0003924;GTPase activity;2.81184332550644e-05!GO:0000785;chromatin;3.55168129405121e-05!GO:0009889;regulation of biosynthetic process;3.71934674718398e-05!GO:0016197;endosome transport;3.7249702387828e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.1739465878124e-05!GO:0015399;primary active transmembrane transporter activity;4.1739465878124e-05!GO:0008654;phospholipid biosynthetic process;4.26595131702826e-05!GO:0044440;endosomal part;4.26595131702826e-05!GO:0010008;endosome membrane;4.26595131702826e-05!GO:0003724;RNA helicase activity;4.54234867316582e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.54234867316582e-05!GO:0009892;negative regulation of metabolic process;4.73190025936031e-05!GO:0044437;vacuolar part;4.74738929638501e-05!GO:0051336;regulation of hydrolase activity;4.84283144459922e-05!GO:0010468;regulation of gene expression;4.94012221023165e-05!GO:0031252;leading edge;5.17003334349874e-05!GO:0009967;positive regulation of signal transduction;6.03873871924616e-05!GO:0048522;positive regulation of cellular process;7.8312109163546e-05!GO:0005096;GTPase activator activity;8.86280349128312e-05!GO:0005765;lysosomal membrane;9.17696639318163e-05!GO:0051168;nuclear export;0.000104354096937626!GO:0032561;guanyl ribonucleotide binding;0.000107063531596247!GO:0019001;guanyl nucleotide binding;0.000107063531596247!GO:0008632;apoptotic program;0.000124811298044933!GO:0044262;cellular carbohydrate metabolic process;0.000127056446358965!GO:0030695;GTPase regulator activity;0.000134332371846671!GO:0005885;Arp2/3 protein complex;0.000146527926113756!GO:0007034;vacuolar transport;0.000160796729813741!GO:0022890;inorganic cation transmembrane transporter activity;0.000161680424896188!GO:0005762;mitochondrial large ribosomal subunit;0.000173068948871472!GO:0000315;organellar large ribosomal subunit;0.000173068948871472!GO:0003729;mRNA binding;0.00017797006343951!GO:0006401;RNA catabolic process;0.000184378589251603!GO:0006612;protein targeting to membrane;0.000192475023484815!GO:0006950;response to stress;0.000199720810335877!GO:0006091;generation of precursor metabolites and energy;0.000202954841895426!GO:0015992;proton transport;0.000207013976614297!GO:0006818;hydrogen transport;0.000211121283209685!GO:0008234;cysteine-type peptidase activity;0.000217061704654366!GO:0031497;chromatin assembly;0.000240766548039395!GO:0006350;transcription;0.000241767364803772!GO:0065007;biological regulation;0.000264396605554216!GO:0005813;centrosome;0.000280205952489652!GO:0043021;ribonucleoprotein binding;0.000294558079459125!GO:0003690;double-stranded DNA binding;0.000299637594730525!GO:0031902;late endosome membrane;0.000307297008390502!GO:0003714;transcription corepressor activity;0.000315677604822019!GO:0006334;nucleosome assembly;0.000328805209356045!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000338159969581398!GO:0004674;protein serine/threonine kinase activity;0.000367624575392015!GO:0005798;Golgi-associated vesicle;0.000391211656480401!GO:0006260;DNA replication;0.000447681620162454!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000467321948073186!GO:0007050;cell cycle arrest;0.00048033375471783!GO:0048518;positive regulation of biological process;0.000481132720791284!GO:0008186;RNA-dependent ATPase activity;0.000507577462550781!GO:0016044;membrane organization and biogenesis;0.000521105386207893!GO:0005769;early endosome;0.000620748695926564!GO:0009165;nucleotide biosynthetic process;0.000623055937215797!GO:0006402;mRNA catabolic process;0.000644504638310828!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000663102851063389!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000706873814800944!GO:0051427;hormone receptor binding;0.000756792831656762!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000761558050630149!GO:0043087;regulation of GTPase activity;0.000766549834145406!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00078374075345352!GO:0005667;transcription factor complex;0.000812497265798448!GO:0005815;microtubule organizing center;0.000819888755616929!GO:0007265;Ras protein signal transduction;0.000826264652528501!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00088389111334975!GO:0043623;cellular protein complex assembly;0.000897359090504232!GO:0043492;ATPase activity, coupled to movement of substances;0.000933889346736514!GO:0007041;lysosomal transport;0.000990119684927083!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00100465493967531!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00126160161509624!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0012910138793703!GO:0030384;phosphoinositide metabolic process;0.00133633960074019!GO:0035257;nuclear hormone receptor binding;0.00135692046864669!GO:0004004;ATP-dependent RNA helicase activity;0.00139137336188329!GO:0044431;Golgi apparatus part;0.00139687772184456!GO:0031982;vesicle;0.0014371488165008!GO:0046489;phosphoinositide biosynthetic process;0.00145054495317422!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00150298303676401!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00150298303676401!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00150298303676401!GO:0015980;energy derivation by oxidation of organic compounds;0.00150298303676401!GO:0006414;translational elongation;0.00151393662263076!GO:0005083;small GTPase regulator activity;0.00184076849426099!GO:0046474;glycerophospholipid biosynthetic process;0.00192097291100498!GO:0000314;organellar small ribosomal subunit;0.00193327486899247!GO:0005763;mitochondrial small ribosomal subunit;0.00193327486899247!GO:0032940;secretion by cell;0.00200816540723503!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00204117749548603!GO:0019318;hexose metabolic process;0.00208279338609466!GO:0006650;glycerophospholipid metabolic process;0.00226473700210438!GO:0001726;ruffle;0.0024232843695036!GO:0019843;rRNA binding;0.0024369144190316!GO:0031072;heat shock protein binding;0.0024427251824307!GO:0043681;protein import into mitochondrion;0.0024427251824307!GO:0005996;monosaccharide metabolic process;0.00252434348148845!GO:0003746;translation elongation factor activity;0.00253415475947269!GO:0016363;nuclear matrix;0.00266247057134595!GO:0008270;zinc ion binding;0.00314075501499239!GO:0005741;mitochondrial outer membrane;0.0031476174641066!GO:0007040;lysosome organization and biogenesis;0.0033496530755098!GO:0003899;DNA-directed RNA polymerase activity;0.00350452571797093!GO:0016491;oxidoreductase activity;0.00359606669596917!GO:0004722;protein serine/threonine phosphatase activity;0.00380151599240695!GO:0004197;cysteine-type endopeptidase activity;0.00405624213624869!GO:0033116;ER-Golgi intermediate compartment membrane;0.00415750274563981!GO:0030693;caspase activity;0.00423646070818078!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00433049388827953!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00433049388827953!GO:0000278;mitotic cell cycle;0.00435610810411783!GO:0031410;cytoplasmic vesicle;0.00439087032588238!GO:0045892;negative regulation of transcription, DNA-dependent;0.00466078485576485!GO:0006383;transcription from RNA polymerase III promoter;0.00469736266475762!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00473383215458806!GO:0051252;regulation of RNA metabolic process;0.00486592515832506!GO:0051539;4 iron, 4 sulfur cluster binding;0.00486592515832506!GO:0006626;protein targeting to mitochondrion;0.00503755951332049!GO:0046483;heterocycle metabolic process;0.00518199602396765!GO:0051540;metal cluster binding;0.00518657267614681!GO:0051536;iron-sulfur cluster binding;0.00518657267614681!GO:0045454;cell redox homeostasis;0.00522751458482097!GO:0006261;DNA-dependent DNA replication;0.00523325968599192!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00525428861202746!GO:0006891;intra-Golgi vesicle-mediated transport;0.00546622718078341!GO:0048500;signal recognition particle;0.00574031888360589!GO:0000287;magnesium ion binding;0.00579632188989094!GO:0006611;protein export from nucleus;0.00588673316398447!GO:0031625;ubiquitin protein ligase binding;0.00611655872381561!GO:0016251;general RNA polymerase II transcription factor activity;0.00612042669061512!GO:0033033;negative regulation of myeloid cell apoptosis;0.00628164966487278!GO:0001803;regulation of type III hypersensitivity;0.00628164966487278!GO:0032733;positive regulation of interleukin-10 production;0.00628164966487278!GO:0033025;regulation of mast cell apoptosis;0.00628164966487278!GO:0001805;positive regulation of type III hypersensitivity;0.00628164966487278!GO:0033023;mast cell homeostasis;0.00628164966487278!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.00628164966487278!GO:0033032;regulation of myeloid cell apoptosis;0.00628164966487278!GO:0001802;type III hypersensitivity;0.00628164966487278!GO:0033028;myeloid cell apoptosis;0.00628164966487278!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.00628164966487278!GO:0033026;negative regulation of mast cell apoptosis;0.00628164966487278!GO:0033024;mast cell apoptosis;0.00628164966487278!GO:0046467;membrane lipid biosynthetic process;0.00630427311257509!GO:0046914;transition metal ion binding;0.00641271388154301!GO:0008287;protein serine/threonine phosphatase complex;0.00701249538849359!GO:0032774;RNA biosynthetic process;0.0070525259192511!GO:0031988;membrane-bound vesicle;0.0071410728178176!GO:0006302;double-strand break repair;0.00734617412616506!GO:0006352;transcription initiation;0.0074223508402931!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00743347135328931!GO:0015002;heme-copper terminal oxidase activity;0.00743347135328931!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00743347135328931!GO:0004129;cytochrome-c oxidase activity;0.00743347135328931!GO:0045449;regulation of transcription;0.00752583221231297!GO:0043281;regulation of caspase activity;0.00763409607467527!GO:0006310;DNA recombination;0.00770714811177358!GO:0009607;response to biotic stimulus;0.0077335582685696!GO:0006914;autophagy;0.00775302953550423!GO:0032318;regulation of Ras GTPase activity;0.00775302953550423!GO:0006351;transcription, DNA-dependent;0.00779105271833675!GO:0045792;negative regulation of cell size;0.00791796746322481!GO:0043488;regulation of mRNA stability;0.00796246562116982!GO:0043487;regulation of RNA stability;0.00796246562116982!GO:0005684;U2-dependent spliceosome;0.00796502725763378!GO:0030027;lamellipodium;0.00803407362500837!GO:0008033;tRNA processing;0.00814170773059375!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00829865936315477!GO:0045047;protein targeting to ER;0.00829865936315477!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00837698721585849!GO:0030258;lipid modification;0.00847461738321364!GO:0008333;endosome to lysosome transport;0.00853545792888912!GO:0007033;vacuole organization and biogenesis;0.00857017979933297!GO:0004177;aminopeptidase activity;0.0086068192856513!GO:0051325;interphase;0.0087084195155306!GO:0051090;regulation of transcription factor activity;0.00898070352885192!GO:0030663;COPI coated vesicle membrane;0.00900824789616379!GO:0030126;COPI vesicle coat;0.00900824789616379!GO:0031968;organelle outer membrane;0.00900824789616379!GO:0007006;mitochondrial membrane organization and biogenesis;0.00915768666856862!GO:0008312;7S RNA binding;0.00923415600089678!GO:0030308;negative regulation of cell growth;0.00947135629314343!GO:0005975;carbohydrate metabolic process;0.00966591316069075!GO:0051329;interphase of mitotic cell cycle;0.00969138126217777!GO:0016853;isomerase activity;0.00974878241448142!GO:0046822;regulation of nucleocytoplasmic transport;0.00976228880469173!GO:0005637;nuclear inner membrane;0.00996008624659155!GO:0006897;endocytosis;0.00999340826642412!GO:0010324;membrane invagination;0.00999340826642412!GO:0019867;outer membrane;0.0100439712728019!GO:0046519;sphingoid metabolic process;0.010045834562074!GO:0006497;protein amino acid lipidation;0.0104345104336879!GO:0045045;secretory pathway;0.0104763632200669!GO:0016791;phosphoric monoester hydrolase activity;0.0105376321330326!GO:0009966;regulation of signal transduction;0.0111595630864547!GO:0051087;chaperone binding;0.0112015878610424!GO:0000118;histone deacetylase complex;0.0112289435016923!GO:0051920;peroxiredoxin activity;0.0113467682010956!GO:0030041;actin filament polymerization;0.0113961982340792!GO:0000786;nucleosome;0.0118118499624244!GO:0016272;prefoldin complex;0.0120030048278651!GO:0030867;rough endoplasmic reticulum membrane;0.0120307475059479!GO:0048002;antigen processing and presentation of peptide antigen;0.0120862557162332!GO:0030118;clathrin coat;0.0122575345318516!GO:0006643;membrane lipid metabolic process;0.0122767133182121!GO:0048487;beta-tubulin binding;0.0124558244674246!GO:0019864;IgG binding;0.0124984540609577!GO:0051789;response to protein stimulus;0.012564580931218!GO:0006986;response to unfolded protein;0.012564580931218!GO:0048468;cell development;0.0127237777875556!GO:0016023;cytoplasmic membrane-bound vesicle;0.0127594470993264!GO:0045926;negative regulation of growth;0.0127929988879024!GO:0003725;double-stranded RNA binding;0.012856332240584!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0131532288226298!GO:0016584;nucleosome positioning;0.0133236588448231!GO:0030137;COPI-coated vesicle;0.0133421412843821!GO:0008624;induction of apoptosis by extracellular signals;0.0134195045008456!GO:0000139;Golgi membrane;0.0134195045008456!GO:0006607;NLS-bearing substrate import into nucleus;0.0138290227551679!GO:0016301;kinase activity;0.0138615813470759!GO:0005048;signal sequence binding;0.0138714291974164!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0140944936325688!GO:0006672;ceramide metabolic process;0.0140944936325688!GO:0030658;transport vesicle membrane;0.0141982858929418!GO:0006919;caspase activation;0.0151494489270378!GO:0006007;glucose catabolic process;0.0151494489270378!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0152902641061293!GO:0006506;GPI anchor biosynthetic process;0.0153678425625074!GO:0008320;protein transmembrane transporter activity;0.0154963268641299!GO:0016788;hydrolase activity, acting on ester bonds;0.0156314035772625!GO:0043022;ribosome binding;0.015790579831248!GO:0005869;dynactin complex;0.015790579831248!GO:0006740;NADPH regeneration;0.016500686890938!GO:0006098;pentose-phosphate shunt;0.016500686890938!GO:0002757;immune response-activating signal transduction;0.0166919100642338!GO:0005099;Ras GTPase activator activity;0.0166943165387784!GO:0030518;steroid hormone receptor signaling pathway;0.0169002890161421!GO:0032763;regulation of mast cell cytokine production;0.0170697008172783!GO:0032762;mast cell cytokine production;0.0170697008172783!GO:0008180;signalosome;0.0172440147689692!GO:0006405;RNA export from nucleus;0.0172895248487277!GO:0051235;maintenance of localization;0.0177901294524335!GO:0000209;protein polyubiquitination;0.0177901294524335!GO:0046966;thyroid hormone receptor binding;0.0178638029209595!GO:0043280;positive regulation of caspase activity;0.0178959529752801!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0183676485235692!GO:0010257;NADH dehydrogenase complex assembly;0.0183676485235692!GO:0033108;mitochondrial respiratory chain complex assembly;0.0183676485235692!GO:0004527;exonuclease activity;0.0184118006473065!GO:0006376;mRNA splice site selection;0.0186187755344787!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0186187755344787!GO:0016811;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;0.0188103360811742!GO:0004218;cathepsin S activity;0.0188874241200042!GO:0042802;identical protein binding;0.0189708016142259!GO:0009893;positive regulation of metabolic process;0.0196144736261886!GO:0008637;apoptotic mitochondrial changes;0.0198246585138114!GO:0004518;nuclease activity;0.020057606412152!GO:0030176;integral to endoplasmic reticulum membrane;0.020057606412152!GO:0006213;pyrimidine nucleoside metabolic process;0.0202708945525647!GO:0046983;protein dimerization activity;0.0202708945525647!GO:0006509;membrane protein ectodomain proteolysis;0.0205238021839864!GO:0033619;membrane protein proteolysis;0.0205238021839864!GO:0006458;'de novo' protein folding;0.0206783277573732!GO:0051084;'de novo' posttranslational protein folding;0.0206783277573732!GO:0022884;macromolecule transmembrane transporter activity;0.0211273526005533!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0211273526005533!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0212530836807886!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.021490050226533!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0215164916433477!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0215164916433477!GO:0009126;purine nucleoside monophosphate metabolic process;0.0215164916433477!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0215164916433477!GO:0003711;transcription elongation regulator activity;0.0220682689397713!GO:0030833;regulation of actin filament polymerization;0.0224316139842765!GO:0006595;polyamine metabolic process;0.0224316139842765!GO:0004185;serine carboxypeptidase activity;0.0224316139842765!GO:0051098;regulation of binding;0.0226725426088694!GO:0005669;transcription factor TFIID complex;0.023118235773055!GO:0002764;immune response-regulating signal transduction;0.0237612738058428!GO:0016859;cis-trans isomerase activity;0.0241727972388117!GO:0050811;GABA receptor binding;0.0242665442391608!GO:0042613;MHC class II protein complex;0.0246265373442908!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0250326852123808!GO:0042158;lipoprotein biosynthetic process;0.0251899379381196!GO:0016311;dephosphorylation;0.0252041948085689!GO:0030036;actin cytoskeleton organization and biogenesis;0.0258922449865105!GO:0009161;ribonucleoside monophosphate metabolic process;0.0259652160703104!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0259652160703104!GO:0015923;mannosidase activity;0.0260192396657389!GO:0009112;nucleobase metabolic process;0.0264663410323758!GO:0015631;tubulin binding;0.0266305653342765!GO:0017091;AU-rich element binding;0.0267297900824994!GO:0050779;RNA destabilization;0.0267297900824994!GO:0000289;poly(A) tail shortening;0.0267297900824994!GO:0008656;caspase activator activity;0.0269084234918009!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0269208559271165!GO:0006839;mitochondrial transport;0.0275726542713463!GO:0015630;microtubule cytoskeleton;0.0275869428491318!GO:0030660;Golgi-associated vesicle membrane;0.0284031136674755!GO:0030145;manganese ion binding;0.0288658920362679!GO:0044452;nucleolar part;0.0292783852304948!GO:0008139;nuclear localization sequence binding;0.0292783852304948!GO:0022415;viral reproductive process;0.0300072959414207!GO:0001816;cytokine production;0.0303856411623476!GO:0006013;mannose metabolic process;0.0306407256333338!GO:0000726;non-recombinational repair;0.0310386842011527!GO:0008538;proteasome activator activity;0.0311677358946686!GO:0000303;response to superoxide;0.0311992661799491!GO:0009116;nucleoside metabolic process;0.0312988434063466!GO:0019883;antigen processing and presentation of endogenous antigen;0.031300901095844!GO:0006289;nucleotide-excision repair;0.0317552215383029!GO:0000305;response to oxygen radical;0.0321953470169911!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0322061919406701!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.032245188487452!GO:0032760;positive regulation of tumor necrosis factor production;0.0331584800655846!GO:0005832;chaperonin-containing T-complex;0.0331895188663859!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0333963428887869!GO:0045947;negative regulation of translational initiation;0.0334072121839104!GO:0000082;G1/S transition of mitotic cell cycle;0.0337002906356738!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0338111250698237!GO:0000049;tRNA binding;0.0338266564047333!GO:0022403;cell cycle phase;0.035153737037402!GO:0045309;protein phosphorylated amino acid binding;0.0357868172540923!GO:0030119;AP-type membrane coat adaptor complex;0.0357868172540923!GO:0006778;porphyrin metabolic process;0.0359897258331003!GO:0033013;tetrapyrrole metabolic process;0.0359897258331003!GO:0032640;tumor necrosis factor production;0.0360018163833208!GO:0006505;GPI anchor metabolic process;0.0361568431442945!GO:0016605;PML body;0.0364349444540294!GO:0051101;regulation of DNA binding;0.0365215081098951!GO:0006644;phospholipid metabolic process;0.0366377692607238!GO:0022406;membrane docking;0.0371211953128016!GO:0048278;vesicle docking;0.0371211953128016!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0375171271406923!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0377294907883404!GO:0007021;tubulin folding;0.0379316863818923!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0385196658597701!GO:0006006;glucose metabolic process;0.0385196658597701!GO:0004659;prenyltransferase activity;0.0385631830861006!GO:0008017;microtubule binding;0.0387499694236922!GO:0008168;methyltransferase activity;0.0392207853360434!GO:0051223;regulation of protein transport;0.0396724242456895!GO:0031647;regulation of protein stability;0.0396849714881119!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0396849714881119!GO:0033367;protein localization in mast cell secretory granule;0.0396849714881119!GO:0033365;protein localization in organelle;0.0396849714881119!GO:0033371;T cell secretory granule organization and biogenesis;0.0396849714881119!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0396849714881119!GO:0033375;protease localization in T cell secretory granule;0.0396849714881119!GO:0042629;mast cell granule;0.0396849714881119!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0396849714881119!GO:0033364;mast cell secretory granule organization and biogenesis;0.0396849714881119!GO:0033380;granzyme B localization in T cell secretory granule;0.0396849714881119!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0396849714881119!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0396849714881119!GO:0033368;protease localization in mast cell secretory granule;0.0396849714881119!GO:0033366;protein localization in secretory granule;0.0396849714881119!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0396849714881119!GO:0033374;protein localization in T cell secretory granule;0.0396849714881119!GO:0006904;vesicle docking during exocytosis;0.0396849714881119!GO:0043621;protein self-association;0.0396849714881119!GO:0005057;receptor signaling protein activity;0.040239638834448!GO:0030880;RNA polymerase complex;0.0403256278643417!GO:0006733;oxidoreduction coenzyme metabolic process;0.040514380737066!GO:0000339;RNA cap binding;0.0407101721969104!GO:0006355;regulation of transcription, DNA-dependent;0.0410263069679346!GO:0006367;transcription initiation from RNA polymerase II promoter;0.041467145307292!GO:0031901;early endosome membrane;0.0414873739332896!GO:0035258;steroid hormone receptor binding;0.0419062731561518!GO:0006516;glycoprotein catabolic process;0.042887220612614!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0428991068967244!GO:0046839;phospholipid dephosphorylation;0.042946164455286!GO:0016741;transferase activity, transferring one-carbon groups;0.0437391620730101!GO:0015036;disulfide oxidoreductase activity;0.043877875261318!GO:0047485;protein N-terminus binding;0.0440153211818273!GO:0060090;molecular adaptor activity;0.0449997780390739!GO:0043300;regulation of leukocyte degranulation;0.0450054580379861!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0458053386391615!GO:0009119;ribonucleoside metabolic process;0.0459669503410896!GO:0006368;RNA elongation from RNA polymerase II promoter;0.046063871240221!GO:0043433;negative regulation of transcription factor activity;0.0463010595688493!GO:0001784;phosphotyrosine binding;0.0464613369596452!GO:0006354;RNA elongation;0.0472986125113968!GO:0005092;GDP-dissociation inhibitor activity;0.0473367376709978!GO:0031124;mRNA 3'-end processing;0.0477483146010878!GO:0000119;mediator complex;0.047914404449098!GO:0051219;phosphoprotein binding;0.0482372850714243!GO:0045893;positive regulation of transcription, DNA-dependent;0.0494184214542123!GO:0042168;heme metabolic process;0.0494872350634887!GO:0019783;small conjugating protein-specific protease activity;0.0495203261792065
 |sample_id=11800
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=NANOG{mouse}:2.4080182646;HMX1:2.3542865049;SPI1:2.26626138303;SPIB:1.97600189765;IRF1,2:1.93679522441;DMAP1_NCOR{1,2}_SMARC:1.73287153969;NFIL3:1.55117890689;ETS1,2:1.53954869679;IRF7:1.52352414656;TLX2:1.40679989398;RFX2..5_RFXANK_RFXAP:1.33155110197;ATF5_CREB3:1.32997327706;ELF1,2,4:1.29398270047;TGIF1:1.27861015028;FOXN1:1.13995945248;FOX{F1,F2,J1}:1.12020664594;SREBF1,2:1.10470413735;RUNX1..3:1.04264380606;HES1:1.04201549292;CREB1:1.01012904005;FOXO1,3,4:0.973187276259;MAFB:0.968671667617;FOX{I1,J2}:0.938401146783;NR6A1:0.911331752681;PAX2:0.869409443356;ALX1:0.853582417576;PAX4:0.821857631339;ESRRA:0.783366358803;EP300:0.741624793907;ATF4:0.694742215466;CDX1,2,4:0.649085608309;GLI1..3:0.638451597201;NFKB1_REL_RELA:0.638284021546;FOXA2:0.637401605663;TAL1_TCF{3,4,12}:0.57406012081;ESR1:0.564443236547;NKX2-2,8:0.560535154778;ZBTB16:0.558271105593;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.535699093578;FOX{D1,D2}:0.518845540521;FOXP3:0.476113597899;NR5A1,2:0.445074347417;TOPORS:0.434134680482;EBF1:0.403750687552;POU5F1:0.397335005147;ALX4:0.366945026556;PAX8:0.35545236494;ELK1,4_GABP{A,B1}:0.311167150136;HIF1A:0.310977363286;HOXA9_MEIS1:0.306556840762;IKZF2:0.305431664915;HMGA1,2:0.293876853314;CRX:0.290744672455;HBP1_HMGB_SSRP1_UBTF:0.282986290033;RORA:0.249463009241;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.195854125321;PAX3,7:0.191998747945;EN1,2:0.191202268722;ZNF148:0.178427907709;BPTF:0.165338568194;JUN:0.158551847134;T:0.154732341124;RXRA_VDR{dimer}:0.153145881788;FOXQ1:0.15229069546;HLF:0.143335094443;FOXP1:0.143259720948;TFAP4:0.142240721017;TFCP2:0.140130516814;PITX1..3:0.133240439932;HNF4A_NR2F1,2:0.0920756694724;CEBPA,B_DDIT3:0.0903183974318;NR1H4:0.0578265023987;MEF2{A,B,C,D}:-0.00522725746997;FOSL2:-0.0113963505278;FOXD3:-0.0125018929891;OCT4_SOX2{dimer}:-0.0372648834182;GATA6:-0.0416095646985;ATF2:-0.0591106092907;PPARG:-0.0763186014623;RBPJ:-0.143022463587;POU2F1..3:-0.179571683245;NFE2L2:-0.18183907171;MYB:-0.191009033974;BACH2:-0.196629112705;NFE2L1:-0.214449364016;GZF1:-0.217214668017;FOS_FOS{B,L1}_JUN{B,D}:-0.217767777816;PDX1:-0.239395276417;ATF6:-0.254203725182;RFX1:-0.259913599275;YY1:-0.275849847899;GATA4:-0.290100479347;STAT1,3:-0.305928925447;POU1F1:-0.318048315291;HOX{A5,B5}:-0.323028582031;VSX1,2:-0.341005226111;PBX1:-0.352260891192;NANOG:-0.358523037657;NKX2-3_NKX2-5:-0.362978765571;CUX2:-0.363310209386;NHLH1,2:-0.364293398887;AR:-0.36477503288;NFE2:-0.367513034527;MYFfamily:-0.397562334462;AHR_ARNT_ARNT2:-0.40468324211;STAT2,4,6:-0.409988154809;NFIX:-0.418028039174;SOX2:-0.445699609738;NKX3-1:-0.454940304317;PRRX1,2:-0.468077895772;REST:-0.471499155467;TFAP2{A,C}:-0.490550351736;SPZ1:-0.494695858299;MYOD1:-0.517218810043;MTF1:-0.547713269168;PAX1,9:-0.555625632531;SRF:-0.567465200859;DBP:-0.567716909286;BREu{core}:-0.576271285804;HNF1A:-0.609072600507;AIRE:-0.618904630728;SOX{8,9,10}:-0.65582814152;STAT5{A,B}:-0.681449541407;HOX{A6,A7,B6,B7}:-0.683275907189;ONECUT1,2:-0.68899804016;KLF4:-0.727796524608;ZEB1:-0.734050360044;RXR{A,B,G}:-0.734867818134;ZNF238:-0.756635980524;PAX5:-0.761636020048;NKX3-2:-0.780260449776;PRDM1:-0.793774293478;LHX3,4:-0.813146661775;HSF1,2:-0.814179259776;FOXL1:-0.818688290196;SOX5:-0.820324441636;NFY{A,B,C}:-0.829357645363;HOX{A4,D4}:-0.860586036566;E2F1..5:-0.870484723146;PATZ1:-0.873340128294;XBP1:-0.876875132121;NKX6-1,2:-0.922394227114;LEF1_TCF7_TCF7L1,2:-0.924563158241;EGR1..3:-0.926319875929;RREB1:-0.952417706238;SNAI1..3:-0.965999944783;ZFP161:-0.967140737129;ADNP_IRX_SIX_ZHX:-0.97805241983;TFAP2B:-0.980276408104;SMAD1..7,9:-0.983809514395;ZBTB6:-1.01494661563;ZNF423:-1.02398111364;IKZF1:-1.06181908896;MZF1:-1.06897929175;HAND1,2:-1.0735715335;UFEwm:-1.07521166689;EVI1:-1.08394901913;ARID5B:-1.10477950074;ZIC1..3:-1.11214987311;SP1:-1.11518970263;NRF1:-1.14296479339;MTE{core}:-1.16190863817;MED-1{core}:-1.16304172185;GCM1,2:-1.22188867313;TLX1..3_NFIC{dimer}:-1.24645368154;LMO2:-1.25996981584;HIC1:-1.27900095904;POU6F1:-1.31729781183;ZNF143:-1.32689261611;TBP:-1.32959246608;GTF2I:-1.33272576039;MYBL2:-1.34134593472;PAX6:-1.35656508406;TP53:-1.36565509179;GFI1B:-1.41242864078;MAZ:-1.41976249103;NKX2-1,4:-1.43277797137;GFI1:-1.44124385286;ZNF384:-1.44570493904;FOXM1:-1.47714037245;TFDP1:-1.50444091185;XCPE1{core}:-1.50934297061;CDC5L:-1.51179565405;TEAD1:-1.55158829289;bHLH_family:-1.58966232445;GTF2A1,2:-1.65240096494;NR3C1:-1.65346781035;TEF:-1.65367997402;NFATC1..3:-1.6587264916;SOX17:-1.86406772471;TBX4,5:-1.95929015295;POU3F1..4:-2.44945000511
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11800-124C9;search_select_hide=table117:FF:11800-124C9
 }}

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FF:11800-124C9: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:21, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0