FFCP PHASE1:Hg19::chr17:72426891..72426918,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:72426891..72426918,+
|short_description=p10@GPRC5C
|description=CAGE_peak_10_at_GPRC5C_5end
|association_with_transcript=-133bp_to_ENST00000392627_5end
|...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55890 | |EntrezGene=55890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13309 | |HGNC=13309 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ84 | |UniProt=Q9NQ84 | ||
|association_with_transcript=-133bp_to_ENST00000392627_5end | |||
|cluster_id=chr17:72426891..72426918,+ | |||
|description=CAGE_peak_10_at_GPRC5C_5end | |||
|id=chr17:72426891..72426918,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.29e-09!254;CL:0000223!3.39e-07!59;CL:0002274!9.73e-07!5;CL:0000457!9.73e-07!5;CL:0002191!9.73e-07!5;CL:0000097!9.73e-07!5;CL:0000831!9.73e-07!5;CL:0002028!9.73e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.04e-34;2!CL:0001016;5.04e-34;2!CL:0000453;1.60e-14;5!CL:0000097;1.83e-14;5!CL:0000840;2.45e-12;5!CL:0000990;1.12e-08;8!CL:0000163;1.21e-08;9!CL:0000451;2.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0000453,1.60e-14,5;CL:0000097,1.83e-14,5;CL:0002028,1.83e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000990,1.12e-08,8;CL:0000163,1.21e-08,9;CL:0000451,2.47e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.62e-23;3 | |||
|ontology_enrichment_disease=DOID:305!5.54e-14!106;DOID:0050687!2.85e-10!143;DOID:3119!3.14e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.19e-12;6!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0.709446689665756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0.352193736052904,0.829312462163088,0.720599767084807,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,3.75969483766164,0.591095237907095,0,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0.995261931078505,0,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0.864542502924636,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.26961417541674,0.0984274815147488,0,0,0,0,0,0.83088067605837,0.2249738915515,2.32140586367385,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0.146552233678082,0,0,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.265729680626726,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.235939446695481,0,0,0,0,0.198916222116275,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0,0.118193840883968,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0.709446689665756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0.352193736052904,0.829312462163088,0.720599767084807,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,3.75969483766164,0.591095237907095,0,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0.995261931078505,0,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0.864542502924636,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.26961417541674,0.0984274815147488,0,0,0,0,0,0.83088067605837,0.2249738915515,2.32140586367385,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0.146552233678082,0,0,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.265729680626726,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.235939446695481,0,0,0,0,0.198916222116275,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0,0.118193840883968,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p10@GPRC5C | |||
}} | }} |
Latest revision as of 07:27, 17 September 2015
Short description: | p10@GPRC5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GPRC5C_5end |
Coexpression cluster: | NA |
Association with transcript: | -133bp_to_ENST00000392627_5end |
EntrezGene: | GPRC5C |
HGNC: | 13309 |
UniProt: | Q9NQ84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
Langerhans cell | 1.60e-14 | 5 |
mast cell | 1.83e-14 | 5 |
basophil mast progenitor cell | 1.83e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
conventional dendritic cell | 1.12e-08 | 8 |
endocrine cell | 1.21e-08 | 9 |
dendritic cell | 2.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |