FFCP PHASE1:Hg19::chr17:7307407..7307424,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7307407..7307424,-
|short_description=p1@C17orf61,p1@PLSCR3
|description=CAGE_peak_1_at_C17orf61_5end,CAGE_peak_1_at_PLSCR3_5end
|association_with_transcr...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57048,254863 | |EntrezGene=57048,254863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16495,28618 | |HGNC=16495,28618 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535512,uc002ggr.1,uc002ggs.2,uc010cmg.1_5end | |||
|cluster_id=chr17:7307407..7307424,- | |||
|coexpression_cluster_id=C2143 | |||
|description=CAGE_peak_1_at_C17orf61_5end,CAGE_peak_1_at_PLSCR3_5end | |||
|id=chr17:7307407..7307424,- | |||
|ontology_enrichment_celltype=CL:0000183!7.46e-14!59;CL:0000222!1.77e-13!119;CL:0002321!3.58e-12!248;CL:0000220!5.86e-12!246;CL:0000393!6.76e-12!60;CL:0000211!6.76e-12!60;CL:0000187!2.35e-11!54;CL:0000680!1.19e-10!57;CL:0000056!1.19e-10!57;CL:0000355!1.19e-10!57;CL:0000066!2.93e-09!254;CL:1000449!4.95e-09!16;CL:0000192!8.83e-09!42;CL:0000514!8.83e-09!42;CL:1000497!1.10e-07!18;CL:0002518!1.10e-07!18;CL:0002681!1.24e-07!13;CL:0002584!1.24e-07!13;CL:1000507!5.81e-07!12;CL:1000494!5.81e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.58e-09;15!CL:0002681;1.13e-07;12!CL:0002584;1.13e-07;12!CL:1000497;1.18e-07;17!CL:0002518;1.18e-07;17!CL:0000187;1.66e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.28e-14,121;CL:0002321,1.29e-12,250;CL:0000393,5.28e-12,61;CL:0000211,5.28e-12,61;CL:0000187,1.85e-11,55;CL:0000680,9.29e-11,58;CL:0000056,9.29e-11,58;CL:0000355,9.29e-11,58;CL:0000066,3.77e-09,253;CL:1000449,4.58e-09,15;CL:0000192,6.99e-09,43;CL:0000514,6.99e-09,43;CL:0002681,1.14e-07,12;CL:0002584,1.14e-07,12;CL:1000497,1.19e-07,17;CL:0002518,1.19e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.27e-16!143;UBERON:0003104!9.26e-14!238;UBERON:0009142!9.26e-14!238;UBERON:0002100!3.46e-13!216;UBERON:0003914!6.53e-13!118;UBERON:0004290!1.08e-12!70;UBERON:0000914!5.97e-12!83;UBERON:0002329!5.97e-12!83;UBERON:0003077!5.97e-12!83;UBERON:0003059!5.97e-12!83;UBERON:0007282!5.97e-12!83;UBERON:0009618!5.97e-12!83;UBERON:0007285!5.97e-12!83;UBERON:0000481!1.65e-11!347;UBERON:0000486!2.36e-11!82;UBERON:0001134!5.83e-11!61;UBERON:0002036!5.83e-11!61;UBERON:0003082!5.83e-11!61;UBERON:0002385!7.16e-11!63;UBERON:0001015!7.16e-11!63;UBERON:0000383!7.16e-11!63;UBERON:0000490!5.10e-10!138;UBERON:0000119!4.66e-09!312;UBERON:0004211!4.95e-09!16;UBERON:0001285!4.95e-09!16;UBERON:0007684!4.95e-09!16;UBERON:0003220!4.95e-09!16;UBERON:0004208!4.95e-09!16;UBERON:0003103!5.97e-09!69;UBERON:0000483!7.13e-09!309;UBERON:0000080!8.11e-09!18;UBERON:0002120!8.11e-09!18;UBERON:0004875!8.11e-09!18;UBERON:0005721!8.11e-09!18;UBERON:0005754!8.11e-09!18;UBERON:0007297!8.11e-09!18;UBERON:0006555!8.56e-09!17;UBERON:0005103!8.56e-09!17;UBERON:0000083!8.56e-09!17;UBERON:0009201!8.56e-09!17;UBERON:0004819!8.56e-09!17;UBERON:0006553!8.56e-09!17;UBERON:0003074!8.56e-09!17;UBERON:0003060!8.56e-09!17;UBERON:0005177!3.99e-08!107;UBERON:0002049!6.98e-08!79;UBERON:0007798!6.98e-08!79;UBERON:0001225!1.24e-07!13;UBERON:0008987!1.24e-07!13;UBERON:0000353!1.51e-07!17;UBERON:0009569!1.68e-07!113;UBERON:0004876!2.31e-07!20;UBERON:0009773!5.81e-07!12;UBERON:0001231!5.81e-07!12;UBERON:0004810!5.81e-07!12;UBERON:0005172!6.85e-07!55;UBERON:0005173!6.85e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.58e-09;15!UBERON:0004819;4.58e-09;15!UBERON:0001285;4.58e-09;15!UBERON:0007684;4.58e-09;15!UBERON:0000353;9.48e-08;15!UBERON:0001225;1.13e-07;12!UBERON:0008987;1.13e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,6.07e-17,160;UBERON:0009142,6.07e-17,160;UBERON:0007503,5.07e-16,78;UBERON:0005256,1.21e-13,122;UBERON:0002329,8.30e-13,71;UBERON:0003059,8.30e-13,71;UBERON:0007282,8.30e-13,71;UBERON:0004290,8.30e-13,71;UBERON:0009618,8.30e-13,71;UBERON:0003914,8.69e-13,117;UBERON:0007524,9.35e-13,73;UBERON:0003077,1.61e-12,72;UBERON:0007285,1.61e-12,72;UBERON:0002100,1.76e-12,199;UBERON:0000490,1.03e-11,148;UBERON:0000486,1.80e-11,83;UBERON:0001134,4.52e-11,62;UBERON:0002036,4.52e-11,62;UBERON:0003082,4.52e-11,62;UBERON:0002385,5.54e-11,64;UBERON:0001015,5.54e-11,64;UBERON:0000383,5.54e-11,64;UBERON:0000119,6.32e-10,309;UBERON:0000483,9.84e-10,306;UBERON:0004211,4.58e-09,15;UBERON:0009773,4.58e-09,15;UBERON:0001231,4.58e-09,15;UBERON:0001285,4.58e-09,15;UBERON:0007684,4.58e-09,15;UBERON:0004208,4.58e-09,15;UBERON:0003103,7.76e-09,68;UBERON:0006555,8.36e-09,16;UBERON:0004819,8.36e-09,16;UBERON:0002049,6.97e-08,78;UBERON:0007798,6.97e-08,78;UBERON:0000353,9.49e-08,15;UBERON:0001225,1.14e-07,12;UBERON:0008987,1.14e-07,12;UBERON:0009569,3.44e-07,112;UBERON:0005177,5.21e-07,101;UBERON:0005172,8.83e-07,54;UBERON:0005173,8.83e-07,54 | |||
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| ||
|short_description=p1@C17orf61,p1@PLSCR3 | |||
}} | }} |
Latest revision as of 09:42, 17 September 2015
Short description: | p1@C17orf61, p1@PLSCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C17orf61_5end, CAGE_peak_1_at_PLSCR3_5end |
Coexpression cluster: | C2143_Mesenchymal_Alveolar_Osteoblast_Renal_Adipocyte_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000535512, uc002ggr.1, uc002ggs.2, uc010cmg.1_5end |
EntrezGene: | 57048,254863 |
HGNC: | 28618&submit=Submit 16495, 28618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.28e-14 | 121 |
embryonic cell | 1.29e-12 | 250 |
electrically responsive cell | 5.28e-12 | 61 |
electrically active cell | 5.28e-12 | 61 |
muscle cell | 1.85e-11 | 55 |
muscle precursor cell | 9.29e-11 | 58 |
myoblast | 9.29e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.29e-11 | 58 |
epithelial cell | 3.77e-09 | 253 |
epithelial cell of nephron | 4.58e-09 | 15 |
smooth muscle cell | 6.99e-09 | 43 |
smooth muscle myoblast | 6.99e-09 | 43 |
kidney cortical cell | 1.14e-07 | 12 |
renal cortical epithelial cell | 1.14e-07 | 12 |
kidney cell | 1.19e-07 | 17 |
kidney epithelial cell | 1.19e-07 | 17 |