FFCP PHASE1:Hg19::chr17:73316259..73316283,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:73316259..73316283,-
|short_description=p@chr17:73316259..73316283,-
|description=CAGE_peak_at_chr17:73316259..73316283,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:73316259..73316283,- | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chr17:73316259..73316283,- | |||
|id=chr17:73316259..73316283,- | |||
|ontology_enrichment_celltype=CL:0002087!1.18e-20!119;CL:0002031!6.11e-18!124;CL:0000738!3.15e-17!140;CL:0002032!2.50e-15!165;CL:0000837!2.50e-15!165;CL:0000037!6.59e-15!172;CL:0000566!6.59e-15!172;CL:0002009!7.87e-15!65;CL:0002194!7.96e-15!63;CL:0000576!7.96e-15!63;CL:0000040!7.96e-15!63;CL:0000559!7.96e-15!63;CL:0000988!2.00e-13!182;CL:0000557!4.27e-13!71;CL:0002057!6.86e-13!42;CL:0000766!1.28e-12!76;CL:0000839!1.88e-12!70;CL:0000860!7.62e-12!45;CL:0000763!2.91e-09!112;CL:0000049!2.91e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.35e-14;39!CL:0000234;5.35e-14;39!CL:0000860;9.21e-12;33!CL:0002057;9.21e-12;33!CL:0000576;2.28e-10;48!CL:0000766;3.57e-09;69!CL:0000235;4.66e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.71e-20,59;CL:0000576,1.71e-20,59;CL:0000040,1.71e-20,59;CL:0000559,1.71e-20,59;CL:0000473,5.05e-20,48;CL:0000234,5.05e-20,48;CL:0002009,1.55e-19,61;CL:0002087,2.90e-19,115;CL:0000766,3.40e-18,72;CL:0000839,2.12e-17,66;CL:0000557,5.17e-17,67;CL:0000738,1.53e-16,136;CL:0002031,7.03e-16,120;CL:0002032,1.15e-14,161;CL:0000837,1.15e-14,161;CL:0000860,1.16e-14,42;CL:0002057,1.16e-14,42;CL:0000037,2.60e-14,168;CL:0000988,1.35e-13,177;CL:0000763,7.96e-13,108;CL:0000049,7.96e-13,108;CL:0000235,5.48e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.79e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.49e-10!80;UBERON:0001474!3.07e-09!86;UBERON:0002390!1.37e-08!102;UBERON:0003061!1.37e-08!102;UBERON:0004765!2.45e-08!101;UBERON:0001434!2.45e-08!101;UBERON:0002193!1.16e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.04e-15,76;UBERON:0001474,1.09e-14,82;UBERON:0002390,1.19e-14,98;UBERON:0003061,1.19e-14,98;UBERON:0002193,2.49e-13,108;UBERON:0002405,1.01e-12,93;UBERON:0004765,1.35e-12,90;UBERON:0001434,2.22e-11,100 | |||
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| ||
|short_description=p@chr17:73316259..73316283,- | |||
}} | }} |
Latest revision as of 21:05, 25 July 2015
Short description: | p@chr17:73316259..73316283, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73316259..73316283, - |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.71e-20 | 59 |
monocyte | 1.71e-20 | 59 |
monoblast | 1.71e-20 | 59 |
promonocyte | 1.71e-20 | 59 |
defensive cell | 5.05e-20 | 48 |
phagocyte | 5.05e-20 | 48 |
macrophage dendritic cell progenitor | 1.55e-19 | 61 |
nongranular leukocyte | 2.90e-19 | 115 |
myeloid leukocyte | 3.40e-18 | 72 |
myeloid lineage restricted progenitor cell | 2.12e-17 | 66 |
granulocyte monocyte progenitor cell | 5.17e-17 | 67 |
leukocyte | 1.53e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 7.03e-16 | 120 |
hematopoietic oligopotent progenitor cell | 1.15e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-14 | 161 |
classical monocyte | 1.16e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-14 | 42 |
hematopoietic stem cell | 2.60e-14 | 168 |
hematopoietic cell | 1.35e-13 | 177 |
myeloid cell | 7.96e-13 | 108 |
common myeloid progenitor | 7.96e-13 | 108 |
macrophage | 5.48e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.04e-15 | 76 |
bone element | 1.09e-14 | 82 |
hematopoietic system | 1.19e-14 | 98 |
blood island | 1.19e-14 | 98 |
hemolymphoid system | 2.49e-13 | 108 |
immune system | 1.01e-12 | 93 |
skeletal element | 1.35e-12 | 90 |
skeletal system | 2.22e-11 | 100 |