FFCP PHASE1:Hg19::chr17:74868957..74868969,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74868957..74868969,+
|short_description=p3@MGAT5B
|description=CAGE_peak_3_at_MGAT5B_5end
|association_with_transcript=126bp_to_BC156823_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=146664 | |EntrezGene=146664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24140 | |HGNC=24140 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=126bp_to_BC156823_5end | |||
|cluster_id=chr17:74868957..74868969,+ | |||
|description=CAGE_peak_3_at_MGAT5B_5end | |||
|id=chr17:74868957..74868969,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.55e-18!254;CL:0000333!1.95e-11!41;CL:0000148!1.69e-10!10;CL:0000541!1.69e-10!10;CL:0000077!5.34e-09!19;CL:0000243!9.63e-09!15;CL:0000125!9.63e-09!15;CL:0000030!9.63e-09!15;CL:0000339!9.63e-09!15;CL:0000133!6.45e-08!59;CL:0000095!1.47e-07!17;CL:0000123!1.47e-07!17;CL:0000128!1.86e-07!7;CL:0000126!1.86e-07!7;CL:0000127!1.86e-07!7;CL:0002453!1.86e-07!7;CL:0000147!5.57e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.27e-21;10!CL:0000147;5.31e-15;14!CL:0000077;6.78e-11;19!CL:0000710;2.48e-10;20!CL:0000075;5.02e-10;27!CL:0002567;4.41e-09;3!CL:0000346;5.72e-09;3!CL:1000428;5.72e-09;3!CL:0002566;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.30e-21,10;CL:0000541,3.30e-21,10;CL:0000147,5.33e-15,14;CL:0000333,1.07e-14,41;CL:0000077,7.24e-11,19;CL:0000710,2.48e-10,20;CL:0000075,5.41e-10,27;CL:0000133,9.32e-10,59;CL:0002567,3.92e-09,3;CL:0000346,4.99e-09,3;CL:1000428,4.99e-09,3;CL:0000221,1.08e-07,72;CL:0002566,2.84e-07,1;CL:0000066,8.01e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.15e-18!143;DOID:305!7.48e-18!106;DOID:162!1.52e-14!235;DOID:14566!7.39e-14!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!3.53e-15!9;UBERON:0008947!2.13e-09!38;UBERON:0003258!2.13e-09!38;UBERON:0002294!7.45e-08!7;UBERON:0001173!7.45e-08!7;UBERON:0004912!7.45e-08!7;UBERON:0000072!5.92e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.05e-10;9!UBERON:0001557;1.05e-10;9!UBERON:0000412;5.72e-09;3!UBERON:0001992;5.72e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.87e-11,9;UBERON:0000412,4.99e-09,3;UBERON:0001992,4.99e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.61417158655884,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,1.79389635688862,0,0,0.900273288253207,0,0,0.18611685633159,0,0,0.757301322732344,0.0920498986422993,0,2.4850671476163,0.403008392910561,0.169560592310488,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0,2.76269842704961,0,0,0.473227200159376,1.18009283054671,1.20505514941741,0.992645754591546,1.96091499683166,0.71181185733329,0.943819157121151,2.74710051175484,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,1.71444314588856,0.381988425558278,5.86087236050235,1.71072446022705,1.13110241973656,2.40274446275134,2.5724378936752,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.222617410045812,0,0,0,0,0,1.53403023753232,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0.341826167541004,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82824333818845,0,0,0.0967563312890851,0.803982487948041,0.164230914106418,0,0,0,0.822251547880505,0.596143835108969,0,0.195551382734803,1.36269994427607,0,0,0,0,0,0,0,0.235694034616795,1.9026588850306,1.04602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,1.02232813071253,0.339936274560377,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963099152036517,0,0,0,2.77826969188601,0.244736704506468,0.358177682162975,3.39681591877069,0.438568099157414,1.76689145945881,2.12205442098006,0.337884881306145,0,1.0362910251936,1.51929978088691,0,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0.327543835020193,0.739280431085226,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.827356886187777,0.111231401892069,0,0,0,0,3.23891386827932,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.62041277132864,1.91107787795487,0.559277158988962,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p3@MGAT5B | |||
}} | }} |
Latest revision as of 17:32, 17 September 2015
Short description: | p3@MGAT5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MGAT5B_5end |
Coexpression cluster: | NA |
Association with transcript: | 126bp_to_BC156823_5end |
EntrezGene: | MGAT5B |
HGNC: | 24140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.30e-21 | 10 |
melanoblast | 3.30e-21 | 10 |
pigment cell | 5.33e-15 | 14 |
migratory neural crest cell | 1.07e-14 | 41 |
mesothelial cell | 7.24e-11 | 19 |
neurecto-epithelial cell | 2.48e-10 | 20 |
columnar/cuboidal epithelial cell | 5.41e-10 | 27 |
neurectodermal cell | 9.32e-10 | 59 |
light melanocyte | 3.92e-09 | 3 |
hair follicle dermal papilla cell | 4.99e-09 | 3 |
stem cell of epidermis | 4.99e-09 | 3 |
ectodermal cell | 1.08e-07 | 72 |
dark melanocyte | 2.84e-07 | 1 |
epithelial cell | 8.01e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.87e-11 | 9 |
dermal papilla | 4.99e-09 | 3 |
papillary layer of dermis | 4.99e-09 | 3 |