FFCP PHASE1:Hg19::chr11:118829078..118829088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7379 | |EntrezGene=7379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12579 | |HGNC=12579 | ||
|TSSclassifier=strong | |||
|UniProt=O00526 | |UniProt=O00526 | ||
|association_with_transcript=254bp_to_AF000562_5end | |association_with_transcript=254bp_to_AF000562_5end | ||
|cluster_id=chr11:118829078..118829088,+ | |||
|coexpression_cluster_id=C3092 | |coexpression_cluster_id=C3092 | ||
|description=CAGE_peak_10_at_UPK2_5end | |description=CAGE_peak_10_at_UPK2_5end | ||
|id=chr11:118829078..118829088,+ | |id=chr11:118829078..118829088,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002577;4.09e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.09e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.71e-66;1 | |||
|ontology_enrichment_disease=DOID:178!2.09e-07!1;DOID:326!2.09e-07!1;DOID:3978!2.09e-07!1;DOID:3394!2.09e-07!1;DOID:5844!2.09e-07!1;DOID:1799!3.78e-07!1;DOID:10165!3.78e-07!1;DOID:1798!3.78e-07!1 | |ontology_enrichment_disease=DOID:178!2.09e-07!1;DOID:326!2.09e-07!1;DOID:3978!2.09e-07!1;DOID:3394!2.09e-07!1;DOID:5844!2.09e-07!1;DOID:1799!3.78e-07!1;DOID:10165!3.78e-07!1;DOID:1798!3.78e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:178;1.71e-66;1!DOID:326;1.71e-66;1!DOID:3978;1.71e-66;1!DOID:3394;1.71e-66;1!DOID:5844;1.71e-66;1!DOID:114;4.27e-34;2!DOID:1287;8.00e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.23e-66,1;DOID:326,1.23e-66,1;DOID:3978,1.23e-66,1;DOID:3394,1.23e-66,1;DOID:5844,1.23e-66,1;DOID:114,3.61e-34,2;DOID:1287,7.35e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0002294!8.50e-08!7;UBERON:0001173!8.50e-08!7;UBERON:0004912!8.50e-08!7;UBERON:0000989!3.36e-07!1;UBERON:0008811!3.36e-07!1;UBERON:0006258!3.36e-07!1;UBERON:0005876!3.36e-07!1;UBERON:0004874!3.36e-07!1;UBERON:0004913!7.15e-07!1;UBERON:0003703!7.15e-07!1;UBERON:0001174!7.15e-07!1;UBERON:0004914!7.15e-07!1 | |ontology_enrichment_uberon=UBERON:0002294!8.50e-08!7;UBERON:0001173!8.50e-08!7;UBERON:0004912!8.50e-08!7;UBERON:0000989!3.36e-07!1;UBERON:0008811!3.36e-07!1;UBERON:0006258!3.36e-07!1;UBERON:0005876!3.36e-07!1;UBERON:0004874!3.36e-07!1;UBERON:0004913!7.15e-07!1;UBERON:0003703!7.15e-07!1;UBERON:0001174!7.15e-07!1;UBERON:0004914!7.15e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.03e-17;4!UBERON:0000478;4.08e-12;24!UBERON:0002331;5.93e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.03e-17,4;UBERON:0004340,1.03e-17,4;UBERON:0000478,4.20e-12,24;UBERON:0003124,9.89e-11,7;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10 | |||
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|short_description=p10@UPK2 | |short_description=p10@UPK2 | ||
}} | }} |
Latest revision as of 02:09, 16 September 2015
Short description: | p10@UPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_UPK2_5end |
Coexpression cluster: | C3092_umbilical_heart_choriocarcinoma_rectal_Placental_MCF7_optic |
Association with transcript: | 254bp_to_AF000562_5end |
EntrezGene: | UPK2 |
HGNC: | 12579 |
UniProt: | O00526 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.03e-17 | 4 |
allantois | 1.03e-17 | 4 |
extraembryonic structure | 4.20e-12 | 24 |
chorion | 9.89e-11 | 7 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.23e-66 | 1 |
ischemia | 1.23e-66 | 1 |
extrinsic cardiomyopathy | 1.23e-66 | 1 |
myocardial ischemia | 1.23e-66 | 1 |
myocardial infarction | 1.23e-66 | 1 |
heart disease | 3.61e-34 | 2 |
cardiovascular system disease | 7.35e-18 | 4 |