FFCP PHASE1:Hg19::chr11:1948951..1948961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1948951..1948961,+ | |||
|coexpression_cluster_id=C3128 | |coexpression_cluster_id=C3128 | ||
|description=CAGE_peak_at_chr11:1948951..1948961,+ | |description=CAGE_peak_at_chr11:1948951..1948961,+ | ||
|id=chr11:1948951..1948961,+ | |id=chr11:1948951..1948961,+ | ||
|ontology_enrichment_celltype=CL:0002541!5.08e-21!3;CL:0002536!2.70e-14!2;CL:0002537!2.46e-13!5;CL:0002581!2.35e-08!1;CL:1001319!1.21e-07!1;CL:1000600!1.21e-07!1 | |ontology_enrichment_celltype=CL:0002541!5.08e-21!3;CL:0002536!2.70e-14!2;CL:0002537!2.46e-13!5;CL:0002581!2.35e-08!1;CL:1001319!1.21e-07!1;CL:1000600!1.21e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.91e-40;5!CL:0002541;1.98e-30;3!CL:0000349;3.21e-29;19!CL:0002581;4.58e-23;1!CL:0000134;1.87e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.23e-40,5;CL:0002541,2.67e-30,3;CL:0000349,3.21e-29,19;CL:0002581,3.28e-23,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.75e-12!14 | |ontology_enrichment_disease=DOID:1749!5.75e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.04e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.97e-47!14;UBERON:0000158!7.97e-47!14;UBERON:0000478!1.27e-26!24;UBERON:0000305!1.66e-24!7;UBERON:0003124!6.10e-24!7;UBERON:0004923!1.01e-23!57;UBERON:0004871!1.99e-21!8;UBERON:0000476!5.08e-21!3;UBERON:0000920!5.08e-21!3;UBERON:0003343!5.30e-16!4;UBERON:0004785!5.30e-16!4;UBERON:0003127!2.70e-14!2;UBERON:0001255!1.02e-13!2;UBERON:0001556!1.02e-13!2;UBERON:0003729!6.54e-13!5;UBERON:0000344!3.89e-09!12;UBERON:0004645!1.21e-07!1;UBERON:0001256!1.21e-07!1;UBERON:0001259!1.21e-07!1;UBERON:0001987!1.35e-07!4;UBERON:0004340!1.35e-07!4;UBERON:0000064!2.74e-07!219 | |ontology_enrichment_uberon=UBERON:0005631!7.97e-47!14;UBERON:0000158!7.97e-47!14;UBERON:0000478!1.27e-26!24;UBERON:0000305!1.66e-24!7;UBERON:0003124!6.10e-24!7;UBERON:0004923!1.01e-23!57;UBERON:0004871!1.99e-21!8;UBERON:0000476!5.08e-21!3;UBERON:0000920!5.08e-21!3;UBERON:0003343!5.30e-16!4;UBERON:0004785!5.30e-16!4;UBERON:0003127!2.70e-14!2;UBERON:0001255!1.02e-13!2;UBERON:0001556!1.02e-13!2;UBERON:0003729!6.54e-13!5;UBERON:0000344!3.89e-09!12;UBERON:0004645!1.21e-07!1;UBERON:0001256!1.21e-07!1;UBERON:0001259!1.21e-07!1;UBERON:0001987!1.35e-07!4;UBERON:0004340!1.35e-07!4;UBERON:0000064!2.74e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.07e-55;10!UBERON:0000158;4.07e-55;10!UBERON:0003124;1.98e-30;3!UBERON:0000920;1.98e-30;3!UBERON:0000305;5.12e-29;7!UBERON:0000478;3.31e-23;24!UBERON:0005406;3.06e-12;2!UBERON:0004923;2.27e-09;55!UBERON:0003343;7.48e-07;4!UBERON:0004785;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.66e-39,14;UBERON:0000158,1.66e-39,14;UBERON:0000920,2.67e-30,3;UBERON:0000305,4.23e-29,7;UBERON:0004871,1.44e-25,8;UBERON:0000478,3.31e-23,24;UBERON:0003124,1.31e-13,7;UBERON:0005406,2.59e-12,2;UBERON:0004923,4.20e-12,66;UBERON:0003343,7.27e-07,4;UBERON:0004785,7.27e-07,4 | |||
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|short_description=p@chr11:1948951..1948961,+ | |short_description=p@chr11:1948951..1948961,+ | ||
}} | }} |
Latest revision as of 20:49, 23 July 2015
Short description: | p@chr11:1948951..1948961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1948951..1948961, + |
Coexpression cluster: | C3128_oral_amniotic_chorionic_squamous_Placental_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.23e-40 | 5 |
chorionic membrane mesenchymal stem cell | 2.67e-30 | 3 |
extraembryonic cell | 3.21e-29 | 19 |
perirenal preadipocyte | 3.28e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.66e-39 | 14 |
membranous layer | 1.66e-39 | 14 |
egg chorion | 2.67e-30 | 3 |
amnion | 4.23e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.44e-25 | 8 |
extraembryonic structure | 3.31e-23 | 24 |
chorion | 1.31e-13 | 7 |
perirenal fat | 2.59e-12 | 2 |
organ component layer | 4.20e-12 | 66 |
mucosa of oral region | 7.27e-07 | 4 |
respiratory system mucosa | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.04e-07 | 14 |