FFCP PHASE1:Hg19::chr11:19734369..19734391,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVL1,A7E2D6 | |UniProt=Q8IVL1,A7E2D6 | ||
|association_with_transcript=-489bp_to_ENST00000396085,NM_001244963,NM_145117,NM_182964,uc001mpr.3,uc010rdm.1_5end | |association_with_transcript=-489bp_to_ENST00000396085,NM_001244963,NM_145117,NM_182964,uc001mpr.3,uc010rdm.1_5end | ||
|cluster_id=chr11:19734369..19734391,+ | |||
|coexpression_cluster_id=C3129 | |coexpression_cluster_id=C3129 | ||
|description=CAGE_peak_1_at_NAV2_5end | |description=CAGE_peak_1_at_NAV2_5end | ||
|id=chr11:19734369..19734391,+ | |id=chr11:19734369..19734391,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.93e-19!180;CL:0000222!4.06e-14!119;CL:0000057!2.97e-11!75;CL:0002139!1.00e-08!24;CL:0000115!5.70e-08!35;CL:0000213!7.15e-08!57;CL:0000215!7.15e-08!57;CL:0002078!1.42e-07!44;CL:0000183!4.38e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.93e-19!180;CL:0000222!4.06e-14!119;CL:0000057!2.97e-11!75;CL:0002139!1.00e-08!24;CL:0000115!5.70e-08!35;CL:0000213!7.15e-08!57;CL:0000215!7.15e-08!57;CL:0002078!1.42e-07!44;CL:0000183!4.38e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.58e-09;24!CL:0000115;3.62e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.04e-15,121;CL:0000057,2.51e-11,76;CL:0002139,7.66e-09,24;CL:0000115,1.79e-08,36;CL:0000213,3.53e-08,58;CL:0000215,3.53e-08,58;CL:0002078,5.39e-08,45;CL:0002321,8.12e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;1.72e-09;34!UBERON:0002020;1.72e-09;34!UBERON:0001893;3.39e-09;34!UBERON:0002791;3.67e-09;32!UBERON:0001869;3.79e-09;32!UBERON:0000073;6.41e-09;53!UBERON:0002616;6.41e-09;53!UBERON:0002780;2.37e-08;41!UBERON:0001890;2.37e-08;41!UBERON:0004573;4.52e-08;33!UBERON:0004571;4.52e-08;33!UBERON:0001637;6.91e-08;42!UBERON:0003509;6.91e-08;42!UBERON:0004572;6.91e-08;42!UBERON:0000956;7.76e-08;25!UBERON:0000203;7.76e-08;25!UBERON:0000055;1.19e-07;65!UBERON:0002049;3.01e-07;75!UBERON:0007798;3.01e-07;75!UBERON:0003914;6.29e-07;74!UBERON:0007500;7.71e-07;56!UBERON:0001981;7.71e-07;56!UBERON:0004537;7.71e-07;56!UBERON:0000487;9.10e-07;22 | |||
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| ||
|short_description=p1@NAV2 | |short_description=p1@NAV2 | ||
}} | }} |
Latest revision as of 05:15, 17 September 2015
Short description: | p1@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAV2_5end |
Coexpression cluster: | C3129_Melanocyte_melanoma_occipital_brain_parietal_aorta_Fibroblast |
Association with transcript: | -489bp_to_ENST00000396085, NM_001244963, NM_145117, NM_182964, uc001mpr.3, uc010rdm.1_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | Q8IVL1A7E2D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.04e-15 | 121 |
fibroblast | 2.51e-11 | 76 |
endothelial cell of vascular tree | 7.66e-09 | 24 |
endothelial cell | 1.79e-08 | 36 |
lining cell | 3.53e-08 | 58 |
barrier cell | 3.53e-08 | 58 |
meso-epithelial cell | 5.39e-08 | 45 |
embryonic cell | 8.12e-07 | 250 |