FFCP PHASE1:Hg19::chr17:7905928..7905945,+: Difference between revisions
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|id=chr17:7905928..7905945,+
|short_description=p3@GUCY2D
|description=CAGE_peak_3_at_GUCY2D_5end
|association_with_transcript=-42bp_to_ENST00000254854,NM_000180,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3000 | |EntrezGene=3000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4689 | |HGNC=4689 | ||
|TSSclassifier=strong | |||
|UniProt=Q02846 | |UniProt=Q02846 | ||
|association_with_transcript=-42bp_to_ENST00000254854,NM_000180,uc002gjt.2_5end | |||
|cluster_id=chr17:7905928..7905945,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_3_at_GUCY2D_5end | |||
|id=chr17:7905928..7905945,+ | |||
|ontology_enrichment_celltype=CL:0000306!2.04e-07!4;CL:0002222!2.04e-07!4;CL:0002224!2.04e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.60e-14;3 | |||
|ontology_enrichment_disease=DOID:5409!1.40e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.66e-11;4!DOID:1325;5.23e-07;7!DOID:3904;5.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.80e-11,4;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!4.00e-50!2;UBERON:0002757!4.00e-50!2;UBERON:0010134!4.00e-50!2;UBERON:0002784!4.00e-50!2;UBERON:0005408!4.00e-50!2;UBERON:0001899!4.00e-50!2;UBERON:0002038!9.79e-26!1;UBERON:0009661!9.79e-26!1;UBERON:0003296!1.11e-25!4;UBERON:0010133!1.11e-25!4;UBERON:0000966!8.98e-21!5;UBERON:0005388!8.98e-21!5;UBERON:0001802!8.98e-21!5;UBERON:0000970!3.10e-20!20;UBERON:0002104!2.68e-19!21;UBERON:0000020!1.14e-17!23;UBERON:0001032!5.92e-17!24;UBERON:0004456!5.92e-17!24;UBERON:0001894!3.79e-15!7;UBERON:0006222!3.79e-15!7;UBERON:0003056!1.96e-14!61;UBERON:0002950!1.37e-13!2;UBERON:0001891!1.37e-13!2;UBERON:0009616!1.37e-13!2;UBERON:0000019!2.24e-12!19;UBERON:0000047!2.24e-12!19;UBERON:0004088!2.24e-12!19;UBERON:0003072!2.24e-12!19;UBERON:0003071!2.24e-12!19;UBERON:0004128!2.24e-12!19;UBERON:0001456!2.90e-11!21;UBERON:0003075!2.57e-10!86;UBERON:0007284!2.57e-10!86;UBERON:0002346!7.25e-10!90;UBERON:0006331!1.67e-09!3;UBERON:0005085!2.45e-08!29;UBERON:0010077!2.04e-07!4;UBERON:0005389!2.04e-07!4;UBERON:0000484!2.04e-07!4;UBERON:0002546!2.04e-07!4;UBERON:0000965!2.04e-07!4;UBERON:0001803!2.04e-07!4;UBERON:0003073!2.04e-07!4;UBERON:0005426!2.04e-07!4;UBERON:0005743!2.97e-07!86;UBERON:0000033!3.47e-07!123;UBERON:0000153!7.43e-07!129;UBERON:0007811!7.43e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.16e-78;2!UBERON:0002757;1.16e-78;2!UBERON:0010134;1.16e-78;2!UBERON:0005408;1.16e-78;2!UBERON:0001899;1.16e-78;2!UBERON:0003296;4.94e-40;4!UBERON:0010133;4.94e-40;4!UBERON:0002784;4.94e-40;4!UBERON:0001894;2.02e-23;7!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0000970;5.59e-09;20!UBERON:0002104;1.34e-08;21!UBERON:0000020;6.19e-08;23!UBERON:0001032;1.21e-07;24!UBERON:0004456;1.21e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.16e-78,2;UBERON:0002757,1.16e-78,2;UBERON:0010134,1.16e-78,2;UBERON:0005408,1.16e-78,2;UBERON:0001899,1.16e-78,2;UBERON:0003296,4.94e-40,4;UBERON:0010133,4.94e-40,4;UBERON:0002784,4.94e-40,4;UBERON:0001894,2.02e-23,7;UBERON:0006222,2.02e-23,7;UBERON:0000970,1.32e-08,21;UBERON:0002104,1.32e-08,21;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0000020,1.19e-07,24;UBERON:0001032,1.19e-07,24;UBERON:0004456,1.19e-07,24 | |||
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|short_description=p3@GUCY2D | |||
}} | }} |
Latest revision as of 05:20, 18 September 2015
Short description: | p3@GUCY2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GUCY2D_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -42bp_to_ENST00000254854, NM_000180, uc002gjt.2_5end |
EntrezGene: | GUCY2D |
HGNC: | 4689 |
UniProt: | Q02846 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.16e-78 | 2 |
regional part of epithalamus | 1.16e-78 | 2 |
secretory circumventricular organ | 1.16e-78 | 2 |
circumventricular organ | 1.16e-78 | 2 |
epithalamus | 1.16e-78 | 2 |
gland of diencephalon | 4.94e-40 | 4 |
neuroendocrine gland | 4.94e-40 | 4 |
regional part of diencephalon | 4.94e-40 | 4 |
diencephalon | 2.02e-23 | 7 |
future diencephalon | 2.02e-23 | 7 |
eye | 1.32e-08 | 21 |
visual system | 1.32e-08 | 21 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
sense organ | 1.19e-07 | 24 |
sensory system | 1.19e-07 | 24 |
entire sense organ system | 1.19e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.80e-11 | 4 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |