FFCP PHASE1:Hg19::chr11:64834357..64834371,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:64834357..64834371,- | |||
|coexpression_cluster_id=C732 | |coexpression_cluster_id=C732 | ||
|description=CAGE_peak_at_chr11:64834357..64834371,- | |description=CAGE_peak_at_chr11:64834357..64834371,- | ||
|id=chr11:64834357..64834371,- | |id=chr11:64834357..64834371,- | ||
|ontology_enrichment_celltype=CL:0002322!1.71e-39!5;CL:0000242!7.68e-18!2;CL:0000181!4.13e-11!12;CL:0000417!4.13e-11!12;CL:0000668!4.13e-11!12;CL:0000414!4.13e-11!12;CL:0000412!4.13e-11!12;CL:0000182!4.13e-11!12;CL:0000313!3.00e-09!1;CL:0000148!8.54e-08!10;CL:0000541!8.54e-08!10;CL:0000312!1.16e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.71e-39!5;CL:0000242!7.68e-18!2;CL:0000181!4.13e-11!12;CL:0000417!4.13e-11!12;CL:0000668!4.13e-11!12;CL:0000414!4.13e-11!12;CL:0000412!4.13e-11!12;CL:0000182!4.13e-11!12;CL:0000313!3.00e-09!1;CL:0000148!8.54e-08!10;CL:0000541!8.54e-08!10;CL:0000312!1.16e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.91e-79;2!CL:0000242;1.91e-79;2!CL:0000312;1.33e-32;5!CL:0000240;2.22e-27;6!CL:0000311;2.22e-27;6!CL:0000079;2.22e-27;6!CL:0000237;2.22e-27;6!CL:0000362;1.18e-18;9!CL:0002159;2.18e-12;14!CL:0000095;2.12e-09;17!CL:0002319;6.72e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-79,2;CL:0000312,1.23e-32,5;CL:0000240,2.08e-27,6;CL:0000311,2.08e-27,6;CL:0000079,2.08e-27,6;CL:0000237,2.08e-27,6;CL:0000036,2.08e-27,6;CL:0000357,2.08e-27,6;CL:0000114,2.08e-27,6;CL:0000362,1.13e-18,9;CL:0002159,2.12e-12,14;CL:0000095,2.08e-09,17;CL:0000123,2.08e-09,17;CL:0002319,6.62e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;2.22e-27;6!CL:0000114;2.22e-27;6 | |||
|ontology_enrichment_disease=DOID:2152!3.00e-09!1 | |ontology_enrichment_disease=DOID:2152!3.00e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3119;2.44e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.51e-12,14;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001301!1.99e-09!1;UBERON:0004911!3.00e-09!1;UBERON:0005057!1.28e-07!26;UBERON:0002107!4.62e-07!19;UBERON:0006925!4.62e-07!19;UBERON:0008836!4.62e-07!19 | |ontology_enrichment_uberon=UBERON:0001301!1.99e-09!1;UBERON:0004911!3.00e-09!1;UBERON:0005057!1.28e-07!26;UBERON:0002107!4.62e-07!19;UBERON:0006925!4.62e-07!19;UBERON:0008836!4.62e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.24e-11;15!UBERON:0007376;1.24e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.21e-11,15;UBERON:0007376,1.21e-11,15;UBERON:0007383,1.21e-11,15 | |||
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|short_description=p@chr11:64834357..64834371,- | |short_description=p@chr11:64834357..64834371,- | ||
}} | }} |
Latest revision as of 00:26, 24 July 2015
Short description: | p@chr11:64834357..64834371, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64834357..64834371, - |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.56e-79 | 2 |
keratinocyte | 1.23e-32 | 5 |
stratified squamous epithelial cell | 2.08e-27 | 6 |
keratin accumulating cell | 2.08e-27 | 6 |
stratified epithelial cell | 2.08e-27 | 6 |
keratinizing barrier epithelial cell | 2.08e-27 | 6 |
epithelial fate stem cell | 2.08e-27 | 6 |
stratified epithelial stem cell | 2.08e-27 | 6 |
surface ectodermal cell | 2.08e-27 | 6 |
epidermal cell | 1.13e-18 | 9 |
general ecto-epithelial cell | 2.12e-12 | 14 |
neuron associated cell | 2.08e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.08e-09 | 17 |
neural cell | 6.62e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.21e-11 | 15 |
outer epithelium | 1.21e-11 | 15 |
enveloping layer of ectoderm | 1.21e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.51e-12 | 14 |
cell type cancer | 1.55e-07 | 143 |