FFCP PHASE1:Hg19::chr12:115775465..115775467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:115775465..115775467,- | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_at_chr12:115775465..115775467,- | |description=CAGE_peak_at_chr12:115775465..115775467,- | ||
|id=chr12:115775465..115775467,- | |id=chr12:115775465..115775467,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002601;7.82e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,8.17e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;7.82e-10;1!DOID:3165;7.82e-10;1!DOID:0060121;7.82e-10;1!DOID:2438;7.82e-10;1!DOID:4418;7.82e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.88e-10,1;DOID:3165,6.88e-10,1;DOID:0060121,6.88e-10,1;DOID:2438,6.88e-10,1;DOID:4418,6.88e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.30e-09!115 | |ontology_enrichment_uberon=UBERON:0007023!2.30e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.58e-18;2!UBERON:0002757;1.58e-18;2!UBERON:0010134;1.58e-18;2!UBERON:0005408;1.58e-18;2!UBERON:0001899;1.58e-18;2!UBERON:0001723;3.47e-12;3!UBERON:0001033;3.47e-12;3!UBERON:0002426;4.46e-10;1!UBERON:0003831;4.46e-10;1!UBERON:0003898;4.46e-10;1!UBERON:0004830;4.46e-10;1!UBERON:0003830;4.46e-10;1!UBERON:0005175;4.46e-10;1!UBERON:0001774;4.46e-10;1!UBERON:0001103;4.46e-10;1!UBERON:0003296;1.01e-09;4!UBERON:0010133;1.01e-09;4!UBERON:0002784;1.01e-09;4!UBERON:0002135;1.61e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.59e-18,2;UBERON:0002757,1.59e-18,2;UBERON:0010134,1.59e-18,2;UBERON:0005408,1.59e-18,2;UBERON:0001899,1.59e-18,2;UBERON:0001723,3.19e-12,3;UBERON:0001033,3.19e-12,3;UBERON:0010056,3.19e-12,3;UBERON:0002426,4.46e-10,1;UBERON:0003831,4.46e-10,1;UBERON:0003898,4.46e-10,1;UBERON:0004830,4.46e-10,1;UBERON:0003830,4.46e-10,1;UBERON:0005175,4.46e-10,1;UBERON:0001774,4.46e-10,1;UBERON:0001103,4.46e-10,1;UBERON:0010084,4.46e-10,1;UBERON:0003296,1.01e-09,4;UBERON:0010133,1.01e-09,4;UBERON:0002784,1.01e-09,4;UBERON:0002135,1.36e-09,1;UBERON:0010314,5.10e-07,132 | |||
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| ||
|short_description=p@chr12:115775465..115775467,- | |short_description=p@chr12:115775465..115775467,- | ||
}} | }} |
Latest revision as of 05:21, 24 July 2015
Short description: | p@chr12:115775465..115775467, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:115775465..115775467, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 8.17e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.59e-18 | 2 |
regional part of epithalamus | 1.59e-18 | 2 |
secretory circumventricular organ | 1.59e-18 | 2 |
circumventricular organ | 1.59e-18 | 2 |
epithalamus | 1.59e-18 | 2 |
tongue | 3.19e-12 | 3 |
gustatory system | 3.19e-12 | 3 |
future tongue | 3.19e-12 | 3 |
chest muscle | 4.46e-10 | 1 |
respiratory system muscle | 4.46e-10 | 1 |
skeletal muscle of trunk | 4.46e-10 | 1 |
respiratory system skeletal muscle | 4.46e-10 | 1 |
thoracic segment muscle | 4.46e-10 | 1 |
chest organ | 4.46e-10 | 1 |
muscle of trunk | 4.46e-10 | 1 |
diaphragm | 4.46e-10 | 1 |
future diaphragm | 4.46e-10 | 1 |
gland of diencephalon | 1.01e-09 | 4 |
neuroendocrine gland | 1.01e-09 | 4 |
regional part of diencephalon | 1.01e-09 | 4 |
mitral valve | 1.36e-09 | 1 |
structure with developmental contribution from neural crest | 5.10e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.88e-10 | 1 |
skin benign neoplasm | 6.88e-10 | 1 |
integumentary system benign neoplasm | 6.88e-10 | 1 |
dermis tumor | 6.88e-10 | 1 |
cutaneous fibrous histiocytoma | 6.88e-10 | 1 |