FFCP PHASE1:Hg19::chr12:68619586..68619593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55801 | |EntrezGene=55801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17119 | |HGNC=17119 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPH9 | |UniProt=Q9NPH9 | ||
|association_with_transcript=7bp_to_ENST00000229134_5end | |association_with_transcript=7bp_to_ENST00000229134_5end | ||
|cluster_id=chr12:68619586..68619593,- | |||
|coexpression_cluster_id=C205 | |coexpression_cluster_id=C205 | ||
|description=CAGE_peak_1_at_IL26_5end | |description=CAGE_peak_1_at_IL26_5end | ||
|id=chr12:68619586..68619593,- | |id=chr12:68619586..68619593,- | ||
|ontology_enrichment_celltype=CL:0000084!2.04e-13!25;CL:0000827!2.04e-13!25;CL:0000327!2.64e-12!14;CL:0000153!2.23e-09!9;CL:0000447!2.23e-09!9;CL:0000499!2.03e-08!27;CL:0000898!4.71e-08!3;CL:0000214!8.88e-08!3;CL:0000708!2.03e-07!3;CL:0000791!4.05e-07!18;CL:0000789!4.05e-07!18;CL:0002420!4.05e-07!18;CL:0002419!4.05e-07!18;CL:0000790!4.05e-07!18;CL:0000151!5.62e-07!35 | |ontology_enrichment_celltype=CL:0000084!2.04e-13!25;CL:0000827!2.04e-13!25;CL:0000327!2.64e-12!14;CL:0000153!2.23e-09!9;CL:0000447!2.23e-09!9;CL:0000499!2.03e-08!27;CL:0000898!4.71e-08!3;CL:0000214!8.88e-08!3;CL:0000708!2.03e-07!3;CL:0000791!4.05e-07!18;CL:0000789!4.05e-07!18;CL:0002420!4.05e-07!18;CL:0002419!4.05e-07!18;CL:0000790!4.05e-07!18;CL:0000151!5.62e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000895;1.39e-11;1!CL:0000153;4.69e-11;9!CL:0000447;4.69e-11;9!CL:0000138;8.13e-08;6!CL:0000084;4.50e-07;25!CL:0000327;7.81e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.07e-11,1;CL:0000895,1.07e-11,1;CL:0002436,1.07e-11,1;CL:0002427,1.07e-11,1;CL:0002428,1.07e-11,1;CL:0002429,1.07e-11,1;CL:0002433,1.07e-11,1;CL:0002431,1.07e-11,1;CL:0002432,1.07e-11,1;CL:0000153,5.20e-11,9;CL:0000447,5.20e-11,9;CL:0000058,9.01e-08,6;CL:0000138,9.01e-08,6;CL:0000084,4.33e-07,25;CL:0000827,4.33e-07,25;CL:0000327,8.29e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002427;1.39e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.63e-12;1!DOID:0060061;2.63e-12;1!DOID:8691;2.63e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.63e-12,1;DOID:0060061,2.63e-12,1;DOID:8691,2.63e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0006915!8.88e-08!3;UBERON:0002018!8.88e-08!3;UBERON:0002217!8.88e-08!3;UBERON:0007616!8.88e-08!3;UBERON:0003210!2.03e-07!3 | |ontology_enrichment_uberon=UBERON:0006915!8.88e-08!3;UBERON:0002018!8.88e-08!3;UBERON:0002217!8.88e-08!3;UBERON:0007616!8.88e-08!3;UBERON:0003210!2.03e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;4.53e-12;1!UBERON:0009842;4.53e-12;1!UBERON:0003704;4.53e-12;1!UBERON:0001171;4.53e-12;1!UBERON:0001172;4.53e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.53e-12,1;UBERON:0009842,4.53e-12,1;UBERON:0003704,4.53e-12,1;UBERON:0001171,4.53e-12,1;UBERON:0001172,4.53e-12,1 | |||
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| ||
|short_description=p1@IL26 | |short_description=p1@IL26 | ||
}} | }} |
Latest revision as of 02:21, 20 September 2015
Short description: | p1@IL26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL26_5end |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | 7bp_to_ENST00000229134_5end |
EntrezGene: | IL26 |
HGNC: | 17119 |
UniProt: | Q9NPH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 1.07e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.07e-11 | 1 |
mature CD4 single-positive thymocyte | 1.07e-11 | 1 |
resting double-positive thymocyte | 1.07e-11 | 1 |
double-positive blast | 1.07e-11 | 1 |
CD69-positive double-positive thymocyte | 1.07e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.07e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.07e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.07e-11 | 1 |
GAG secreting cell | 5.20e-11 | 9 |
carbohydrate secreting cell | 5.20e-11 | 9 |
chondroblast | 9.01e-08 | 6 |
chondrocyte | 9.01e-08 | 6 |
T cell | 4.33e-07 | 25 |
pro-T cell | 4.33e-07 | 25 |
extracellular matrix secreting cell | 8.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.53e-12 | 1 |
acinus | 4.53e-12 | 1 |
intrahepatic bile duct | 4.53e-12 | 1 |
portal lobule | 4.53e-12 | 1 |
hepatic acinus | 4.53e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.63e-12 | 1 |
cutaneous T cell lymphoma | 2.63e-12 | 1 |
mycosis fungoides | 2.63e-12 | 1 |