FFCP PHASE1:Hg19::chr14:106320502..106320513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |EntrezGene=3507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_J00258_5end | |association_with_transcript=-1bp_to_J00258_5end | ||
|cluster_id=chr14:106320502..106320513,- | |||
|coexpression_cluster_id=C577 | |coexpression_cluster_id=C577 | ||
|description=CAGE_peak_12_at_IGHM_5end | |description=CAGE_peak_12_at_IGHM_5end | ||
|id=chr14:106320502..106320513,- | |id=chr14:106320502..106320513,- | ||
|ontology_enrichment_celltype=CL:0000945!2.67e-71!24;CL:0000826!2.67e-71!24;CL:0000236!8.14e-39!14;CL:0000542!1.49e-37!53;CL:0000051!1.49e-37!53;CL:0000838!2.58e-34!52;CL:0002087!1.48e-17!119;CL:0002031!6.55e-15!124;CL:0000738!3.17e-14!140;CL:0000037!3.24e-13!172;CL:0000566!3.24e-13!172;CL:0002032!1.26e-12!165;CL:0000837!1.26e-12!165;CL:0000988!3.27e-12!182;CL:0000817!2.12e-08!3;CL:0000946!8.27e-07!1;CL:0000786!8.27e-07!1;CL:0000980!8.27e-07!1;CL:0001024!9.79e-07!1 | |ontology_enrichment_celltype=CL:0000945!2.67e-71!24;CL:0000826!2.67e-71!24;CL:0000236!8.14e-39!14;CL:0000542!1.49e-37!53;CL:0000051!1.49e-37!53;CL:0000838!2.58e-34!52;CL:0002087!1.48e-17!119;CL:0002031!6.55e-15!124;CL:0000738!3.17e-14!140;CL:0000037!3.24e-13!172;CL:0000566!3.24e-13!172;CL:0002032!1.26e-12!165;CL:0000837!1.26e-12!165;CL:0000988!3.27e-12!182;CL:0000817!2.12e-08!3;CL:0000946!8.27e-07!1;CL:0000786!8.27e-07!1;CL:0000980!8.27e-07!1;CL:0001024!9.79e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.97e-82;24!CL:0000236;5.28e-80;13!CL:0000542;9.17e-34;53!CL:0000817;9.48e-18;1!CL:0002087;2.38e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.33e-82,24;CL:0000826,8.33e-82,24;CL:0000236,2.56e-74,14;CL:0000542,7.09e-44,53;CL:0000051,7.09e-44,53;CL:0000838,1.81e-37,52;CL:0002087,1.16e-19,115;CL:0000738,1.60e-16,136;CL:0002031,1.11e-15,120;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0000817,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;9.17e-34;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.85e-09!10;DOID:12603!3.52e-07!1;DOID:2531!3.68e-07!51;DOID:0060083!3.68e-07!51 | |ontology_enrichment_disease=DOID:0060058!4.85e-09!10;DOID:12603!3.52e-07!1;DOID:2531!3.68e-07!51;DOID:0060083!3.68e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:12603;3.74e-18;1!DOID:0060058;1.27e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.44e-18,1;DOID:0060058,1.29e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!6.98e-08!3;UBERON:0004854!6.98e-08!3;UBERON:0009034!6.98e-08!3;UBERON:0002095!6.98e-08!3;UBERON:0004782!6.98e-08!3;UBERON:0003281!6.98e-08!3;UBERON:0009664!6.98e-08!3;UBERON:0002296!6.98e-08!3;UBERON:0005602!6.98e-08!3;UBERON:0001179!6.98e-08!3;UBERON:0006293!6.98e-08!3;UBERON:0000029!5.89e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!6.98e-08!3;UBERON:0004854!6.98e-08!3;UBERON:0009034!6.98e-08!3;UBERON:0002095!6.98e-08!3;UBERON:0004782!6.98e-08!3;UBERON:0003281!6.98e-08!3;UBERON:0009664!6.98e-08!3;UBERON:0002296!6.98e-08!3;UBERON:0005602!6.98e-08!3;UBERON:0001179!6.98e-08!3;UBERON:0006293!6.98e-08!3;UBERON:0000029!5.89e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p12@IGHM | |short_description=p12@IGHM | ||
}} | }} |
Latest revision as of 20:31, 18 September 2015
Short description: | p12@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_IGHM_5end |
Coexpression cluster: | C577_lymphoma_Burkitt_diffuse_b_myeloma_plasma_appendix |
Association with transcript: | -1bp_to_J00258_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.33e-82 | 24 |
pro-B cell | 8.33e-82 | 24 |
B cell | 2.56e-74 | 14 |
lymphocyte | 7.09e-44 | 53 |
common lymphoid progenitor | 7.09e-44 | 53 |
lymphoid lineage restricted progenitor cell | 1.81e-37 | 52 |
nongranular leukocyte | 1.16e-19 | 115 |
leukocyte | 1.60e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.11e-15 | 120 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
precursor B cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.44e-18 | 1 |
lymphoma | 1.29e-07 | 10 |