FFCP PHASE1:Hg19::chr18:21464608..21464649,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:21464608..21464649,+
|short_description=p1@X77598
|description=CAGE_peak_1_at_X77598_5end
|association_with_transcript=-85bp_to_X77598_5end
|EntrezGene=
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_X77598_5end | |||
|cluster_id=chr18:21464608..21464649,+ | |||
|coexpression_cluster_id=C731 | |||
|description=CAGE_peak_1_at_X77598_5end | |||
|id=chr18:21464608..21464649,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.96e-09!15;CL:0002615!1.86e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.64e-36;3!CL:0000136;8.90e-33;13!CL:0002617;5.58e-25;2!CL:0002616;2.62e-13;1!CL:0002581;7.68e-13;1!CL:0000047;4.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.85e-36,3;CL:0000136,2.33e-28,15;CL:0002617,5.58e-25,2;CL:0002616,2.62e-13,1;CL:0002581,5.38e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.03e-12;4!UBERON:0007284;1.03e-12;4!UBERON:0007297;4.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-19!115;UBERON:0004457!2.09e-11!12;UBERON:0000042!2.09e-11!12;UBERON:0003688!3.56e-10!6;UBERON:0002358!3.56e-10!6;UBERON:0003684!3.56e-10!6;UBERON:0001178!3.56e-10!6;UBERON:0003978!9.98e-08!3;UBERON:0009751!9.98e-08!3;UBERON:0000946!9.98e-08!3;UBERON:0002523!9.98e-08!3;UBERON:0005983!9.98e-08!3;UBERON:0002165!9.98e-08!3;UBERON:0002062!9.98e-08!3;UBERON:0007280!9.98e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.68e-32;6!UBERON:0002358;7.68e-32;6!UBERON:0003684;7.68e-32;6!UBERON:0001178;7.68e-32;6!UBERON:0002133;2.08e-24;2!UBERON:0005406;2.34e-24;2!UBERON:0004457;2.34e-21;9!UBERON:0000042;2.34e-21;9!UBERON:0003978;1.27e-16;3!UBERON:0000946;1.27e-16;3!UBERON:0000029;2.95e-13;1!UBERON:0002135;3.76e-13;1!UBERON:0002134;4.77e-13;1!UBERON:0005208;4.77e-13;1!UBERON:0004145;4.77e-13;1!UBERON:0005946;4.77e-13;1!UBERON:0005965;4.77e-13;1!UBERON:0002078;4.77e-13;1!UBERON:0001301;7.68e-13;1!UBERON:0001013;4.59e-08;14!UBERON:0002081;3.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.32e-32,6;UBERON:0002358,8.32e-32,6;UBERON:0003684,8.32e-32,6;UBERON:0001178,8.32e-32,6;UBERON:0005406,1.64e-24,2;UBERON:0002133,2.08e-24,2;UBERON:0003978,1.27e-16,3;UBERON:0009751,1.27e-16,3;UBERON:0000946,1.27e-16,3;UBERON:0002523,1.27e-16,3;UBERON:0005983,1.27e-16,3;UBERON:0002165,1.27e-16,3;UBERON:0002062,1.27e-16,3;UBERON:0007280,1.27e-16,3;UBERON:0004457,4.42e-16,12;UBERON:0000042,4.42e-16,12;UBERON:0000029,2.95e-13,1;UBERON:0002135,3.76e-13,1;UBERON:0002134,4.77e-13,1;UBERON:0005208,4.77e-13,1;UBERON:0005946,4.77e-13,1;UBERON:0005965,4.77e-13,1;UBERON:0002078,4.77e-13,1;UBERON:0001301,8.64e-13,1;UBERON:0001013,4.59e-08,14;UBERON:0004797,1.21e-07,7;UBERON:0003886,1.80e-07,54;UBERON:0002081,3.70e-07,2;UBERON:0010227,3.70e-07,2 | |||
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| ||
|short_description=p1@X77598 | |||
}} | }} |
Latest revision as of 23:59, 25 July 2015
Short description: | p1@X77598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_X77598_5end |
Coexpression cluster: | C731_Adipocyte_Preadipocyte_adipose_Wilms_salivary_Mesenchymal_epididymis |
Association with transcript: | -85bp_to_X77598_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.85e-36 | 3 |
fat cell | 2.33e-28 | 15 |
adipocyte of breast | 5.58e-25 | 2 |
perirenal adipocyte cell | 2.62e-13 | 1 |
perirenal preadipocyte | 5.38e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.32e-32 | 6 |
peritoneum | 8.32e-32 | 6 |
abdominal cavity | 8.32e-32 | 6 |
visceral peritoneum | 8.32e-32 | 6 |
perirenal fat | 1.64e-24 | 2 |
atrioventricular valve | 2.08e-24 | 2 |
valve | 1.27e-16 | 3 |
cardiac mesenchyme | 1.27e-16 | 3 |
cardial valve | 1.27e-16 | 3 |
tunica intima | 1.27e-16 | 3 |
heart layer | 1.27e-16 | 3 |
endocardium | 1.27e-16 | 3 |
endocardial cushion | 1.27e-16 | 3 |
presumptive endocardium | 1.27e-16 | 3 |
cavity lining | 4.42e-16 | 12 |
serous membrane | 4.42e-16 | 12 |
lymph node | 2.95e-13 | 1 |
mitral valve | 3.76e-13 | 1 |
tricuspid valve | 4.77e-13 | 1 |
right atrium valve | 4.77e-13 | 1 |
outflow tract of atrium | 4.77e-13 | 1 |
outflow part of right atrium | 4.77e-13 | 1 |
right cardiac atrium | 4.77e-13 | 1 |
epididymis | 8.64e-13 | 1 |
adipose tissue | 4.59e-08 | 14 |
blood vessel layer | 1.21e-07 | 7 |
body cavity precursor | 1.80e-07 | 54 |
cardiac atrium | 3.70e-07 | 2 |
future cardiac atrium | 3.70e-07 | 2 |