FFCP PHASE1:Hg19::chr18:25616519..25616528,-: Difference between revisions
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|id=chr18:25616519..25616528,-
|short_description=p49@CDH2
|description=CAGE_peak_49_at_CDH2_5end
|association_with_transcript=10bp_to_uc010xbn.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1000 | |EntrezGene=1000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1759 | |HGNC=1759 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_uc010xbn.1_5end | |||
|cluster_id=chr18:25616519..25616528,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_49_at_CDH2_5end | |||
|id=chr18:25616519..25616528,- | |||
|ontology_enrichment_celltype=CL:0000064!6.52e-14!3;CL:0005012!6.52e-14!3;CL:0000067!6.52e-14!3;CL:0002304!6.52e-14!3;CL:0002174!3.41e-11!1;CL:0000501!3.41e-11!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!3.19e-16!86;UBERON:0007284!3.19e-16!86;UBERON:0002346!2.03e-15!90;UBERON:0000033!1.46e-14!123;UBERON:0000955!2.91e-14!69;UBERON:0006238!2.91e-14!69;UBERON:0001017!3.40e-14!82;UBERON:0001778!6.52e-14!3;UBERON:0001775!6.52e-14!3;UBERON:0000153!8.72e-14!129;UBERON:0007811!8.72e-14!129;UBERON:0003056!9.64e-14!61;UBERON:0002771!1.16e-13!3;UBERON:0005743!1.83e-13!86;UBERON:0002791!8.04e-13!33;UBERON:0001893!1.95e-12!34;UBERON:0000073!4.84e-12!94;UBERON:0001016!4.84e-12!94;UBERON:0001049!7.63e-12!57;UBERON:0005068!7.63e-12!57;UBERON:0006241!7.63e-12!57;UBERON:0007135!7.63e-12!57;UBERON:0002616!2.08e-11!59;UBERON:0001871!3.41e-11!7;UBERON:0000488!1.15e-10!4;UBERON:0002336!1.61e-10!1;UBERON:0001018!1.61e-10!1;UBERON:0002473!1.61e-10!1;UBERON:0005340!1.61e-10!1;UBERON:0002316!1.61e-10!1;UBERON:0003544!1.61e-10!1;UBERON:0001020!1.61e-10!1;UBERON:0005970!1.61e-10!1;UBERON:0002437!1.61e-10!1;UBERON:0001882!1.77e-10!1;UBERON:0005403!1.77e-10!1;UBERON:0002780!3.01e-10!41;UBERON:0001890!3.01e-10!41;UBERON:0006240!3.01e-10!41;UBERON:0003080!5.41e-10!42;UBERON:0007023!6.15e-10!115;UBERON:0004121!6.51e-10!169;UBERON:0001869!7.21e-10!32;UBERON:0000924!1.24e-09!173;UBERON:0006601!1.24e-09!173;UBERON:0002020!2.79e-09!34;UBERON:0003528!2.79e-09!34;UBERON:0000956!5.16e-09!25;UBERON:0000203!5.16e-09!25;UBERON:0007625!2.05e-08!11;UBERON:0001950!1.98e-07!20;UBERON:0002203!2.16e-07!6;UBERON:0001768!2.16e-07!6;UBERON:0000200!2.87e-07!6;UBERON:0002619!8.54e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p49@CDH2 | |||
}} | }} |
Latest revision as of 03:09, 19 September 2015
Short description: | p49@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_CDH2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 10bp_to_uc010xbn.1_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |