FFCP PHASE1:Hg19::chr15:89442979..89443002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:89442979..89443002,- | |||
|coexpression_cluster_id=C568 | |coexpression_cluster_id=C568 | ||
|description=CAGE_peak_at_chr15:89442979..89443002,- | |description=CAGE_peak_at_chr15:89442979..89443002,- | ||
|id=chr15:89442979..89443002,- | |id=chr15:89442979..89443002,- | ||
|ontology_enrichment_celltype=CL:0000057!1.26e-10!75;CL:0000055!2.50e-10!180;CL:0000325!2.53e-08!39;CL:0002620!1.29e-07!23;CL:0002334!7.38e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.26e-10!75;CL:0000055!2.50e-10!180;CL:0000325!2.53e-08!39;CL:0002620!1.29e-07!23;CL:0002334!7.38e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.80e-14;13!CL:0002334;7.78e-09;12!CL:0002615;1.50e-08;3!CL:0000135;3.40e-08;3!CL:0000388;3.40e-08;3!CL:0002579;5.49e-08;3!CL:0002580;1.63e-07;3!CL:0002620;1.90e-07;23!CL:0002521;3.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.71e-12,15;CL:0000057,1.79e-09,76;CL:0002334,6.23e-09,12;CL:0002615,1.49e-08,3;CL:0000135,3.50e-08,3;CL:0000388,3.50e-08,3;CL:0002579,5.99e-08,3;CL:0002580,1.06e-07,3;CL:0002620,1.82e-07,23;CL:0002521,3.92e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.07e-07;3!DOID:127;1.07e-07;3!DOID:17;6.00e-07;5!DOID:450;6.00e-07;5!DOID:66;6.00e-07;5!DOID:423;6.00e-07;5!DOID:0080000;6.00e-07;5!DOID:11722;6.00e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.26e-08,3;DOID:127,8.26e-08,3;DOID:17,4.94e-07,5;DOID:450,4.94e-07,5;DOID:66,4.94e-07,5;DOID:423,4.94e-07,5;DOID:0080000,4.94e-07,5;DOID:11722,4.94e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.60e-10!45;UBERON:0002416!1.60e-10!45;UBERON:0003102!1.26e-09!95;UBERON:0002097!2.14e-08!40 | |ontology_enrichment_uberon=UBERON:0002199!1.60e-10!45;UBERON:0002416!1.60e-10!45;UBERON:0003102!1.26e-09!95;UBERON:0002097!2.14e-08!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.48e-15;6!UBERON:0002358;7.48e-15;6!UBERON:0003684;7.48e-15;6!UBERON:0001178;7.48e-15;6!UBERON:0004457;1.63e-12;9!UBERON:0000042;1.63e-12;9!UBERON:0007846;3.40e-08;3!UBERON:0000043;3.40e-08;3!UBERON:0007845;3.40e-08;3!UBERON:0000310;6.21e-08;10!UBERON:0002190;3.53e-07;3!UBERON:0001443;3.91e-07;11!UBERON:0002199;6.62e-07;46!UBERON:0002416;6.62e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.12e-15,6;UBERON:0002358,8.12e-15,6;UBERON:0003684,8.12e-15,6;UBERON:0001178,8.12e-15,6;UBERON:0002199,8.07e-11,46;UBERON:0002416,8.07e-11,46;UBERON:0004457,4.28e-09,12;UBERON:0000042,4.28e-09,12;UBERON:0002097,1.94e-08,41;UBERON:0007846,3.50e-08,3;UBERON:0000043,3.50e-08,3;UBERON:0007845,3.50e-08,3;UBERON:0000310,4.63e-08,10;UBERON:0003102,6.28e-08,99;UBERON:0001443,3.00e-07,11;UBERON:0002190,3.92e-07,3 | |||
|phase1_expression=8.90224058425727,9.42042305120326,5.3562673556469,8.00586386825043,7.59833860526389,10.4680622892044,2.53299878168311,1.26343974685366,2.08948502559871,0.245733936501509,2.09340350391728,0.873765488520689,1.84636884759917,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,2.02785126545153,0.795285947051099,1.45990461090791,0.283604451492204,0,0.43917392846563,0.523916301990851,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0.379891534993739,0.397227542439656,0.860509862246441,0.709336764396714,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.747243402759005,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.413303124703062,0,2.47266929278557,0,0.718618141816238,0,0.125118519871964,0,0,1.22595118319608,1.05166641234618,0.113432183160021,1.61450672119976,3.20336083227851,0.635795703478686,1.50045548042201,1.23663035086127,2.31876486041066,1.8611685633159,1.18143432568886,0.779496041289589,0.757301322732344,1.10459878370759,0.323292113637624,5.32514388774922,4.53384442024381,0.508681776931463,0.386521706326594,0,0,0.609868530647977,0.927708378250397,0.464775771478074,0.518305275076852,0.504641701751257,1.09493207722749,1.56449532329816,0.643240938192885,0,2.3218396401599,6.49691533502627,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.253991577168676,1.14596527667483,0,3.4214489204541,0.514137463516618,0.600686115687835,0.285826432630578,0.224262168690721,0.43596006883328,0.36669142910475,0.646358578788889,0,0.845302752556,0.531876233169741,0,0,0,0,0.857867961948885,7.05408087008876,0,0.325736184293735,0.355391948742546,0,0.904318131178758,2.61460037580088,0.399891964728228,0,0,0,2.39624855491583,4.59447743336456,0,1.01346914667305,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.981531933753119,1.00034104211935,0.271265023699736,0.623912584592421,1.78428988797162,0.630809660135739,0.35142424497814,0.300946099727719,4.5481500811197,0,0,0.553107505625109,0.521301686808497,0.587403472388222,0,0,0,0,0,0,0.604780586659361,2.97729369382532,1.68808170616869,6.17452207752762,4.10045277618243,3.58195074346692,3.05622450172854,5.93672265779964,0.308419387605311,0.710246901252508,0.0821271560138091,0.519254429183621,0.116210378459959,0.362578348774867,2.00506470303285,0.184161977871793,0.459257792658427,1.45672934405374,0.786746489756545,0,0.770153371044148,0,0,0.73886140225013,0,0,0.215915916102139,0,0.812839312631559,2.00675909541941,0,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,1.30151357865721,0.309123034943167,0.366277859273374,0.082509499920588,0.574265537996172,1.95018073810956,0,0,0,0.307007349452259,0,0.429680979473094,0.435050081742686,0.0852266274161009,0.178064071293475,0.495854746082934,0.192190067365106,0,0.10115778085555,0,3.46293581513704,0,0,0.532306030317022,0,0,0,0,0,0.571890581771475,1.27948895655667,2.1396949401696,0,0,0.719489830333259,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,1.83827061539827,0,0,0,0,0,0,0,0,0,0.143411352204052,0.687743287091848,0,0.354761064070598,0.844430541190656,1.64647446479951,0,0,0.192444225451024,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.121360521749513,0,0,0.47748896947538,0,0.614321404198464,0,0,0.333926115068718,0,0.211125408127993,5.57894367102995,0,0,0.102268682502155,0,3.11039587661807,0,0,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,1.77148277162768,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,0.923403102045565,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0.392125068635479,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0.31593289814244,0,0.103688191397247,0,0,0,0,0,0,5.20679215005393,0,0,0.34945333648406,0.171986032471617,0,0,0,0.484945082442097,0,1.129903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| ||
|short_description=p@chr15:89442979..89443002,- | |short_description=p@chr15:89442979..89443002,- | ||
}} | }} |
Latest revision as of 05:15, 25 July 2015
Short description: | p@chr15:89442979..89443002, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:89442979..89443002, - |
Coexpression cluster: | C568_Mesenchymal_Fibroblast_Adipocyte_Preadipocyte_Chondrocyte_aorta_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.71e-12 | 15 |
fibroblast | 1.79e-09 | 76 |
preadipocyte | 6.23e-09 | 12 |
adipocyte of omentum tissue | 1.49e-08 | 3 |
fibrocyte | 3.50e-08 | 3 |
tendon cell | 3.50e-08 | 3 |
omentum preadipocyte | 5.99e-08 | 3 |
preadipocyte of the breast | 1.06e-07 | 3 |
skin fibroblast | 1.82e-07 | 23 |
subcutaneous fat cell | 3.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.12e-15 | 6 |
peritoneum | 8.12e-15 | 6 |
abdominal cavity | 8.12e-15 | 6 |
visceral peritoneum | 8.12e-15 | 6 |
integument | 8.07e-11 | 46 |
integumental system | 8.07e-11 | 46 |
cavity lining | 4.28e-09 | 12 |
serous membrane | 4.28e-09 | 12 |
skin of body | 1.94e-08 | 41 |
dense regular connective tissue | 3.50e-08 | 3 |
tendon | 3.50e-08 | 3 |
regular connective tissue | 3.50e-08 | 3 |
breast | 4.63e-08 | 10 |
surface structure | 6.28e-08 | 99 |
chest | 3.00e-07 | 11 |
subcutaneous adipose tissue | 3.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.26e-08 | 3 |
leiomyoma | 8.26e-08 | 3 |
musculoskeletal system disease | 4.94e-07 | 5 |
myotonic disease | 4.94e-07 | 5 |
muscle tissue disease | 4.94e-07 | 5 |
myopathy | 4.94e-07 | 5 |
muscular disease | 4.94e-07 | 5 |
myotonic dystrophy | 4.94e-07 | 5 |