FFCP PHASE1:Hg19::chr16:22218470..22218480,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:22218470..22218480,- | |||
|coexpression_cluster_id=C1411 | |coexpression_cluster_id=C1411 | ||
|description=CAGE_peak_at_chr16:22218470..22218480,- | |description=CAGE_peak_at_chr16:22218470..22218480,- | ||
|id=chr16:22218470..22218480,- | |id=chr16:22218470..22218480,- | ||
|ontology_enrichment_celltype=CL:0000738!2.79e-31!140;CL:0000037!1.86e-26!172;CL:0000566!1.86e-26!172;CL:0000988!9.12e-26!182;CL:0002031!2.25e-20!124;CL:0002032!3.81e-19!165;CL:0000837!3.81e-19!165;CL:0002087!3.60e-18!119;CL:0002393!3.83e-13!9;CL:0002397!3.83e-13!9;CL:0000838!4.08e-12!52;CL:0000542!8.16e-12!53;CL:0000051!8.16e-12!53;CL:0000784!1.35e-11!3;CL:0000451!7.21e-11!10;CL:0000842!1.99e-10!3;CL:0000766!1.40e-09!76;CL:0000557!2.54e-09!71;CL:0000624!6.06e-09!6;CL:0000763!1.18e-08!112;CL:0000049!1.18e-08!112;CL:0000080!1.22e-08!6;CL:0000134!1.90e-08!358;CL:0002320!4.39e-08!365;CL:0001014!4.41e-08!2;CL:0001016!4.41e-08!2;CL:0000224!6.43e-08!4;CL:0000219!2.23e-07!390;CL:0000839!4.50e-07!70;CL:0002274!5.15e-07!5;CL:0000457!5.15e-07!5;CL:0002191!5.15e-07!5;CL:0000097!5.15e-07!5;CL:0000831!5.15e-07!5;CL:0002028!5.15e-07!5;CL:0000084!6.53e-07!25;CL:0000827!6.53e-07!25 | |ontology_enrichment_celltype=CL:0000738!2.79e-31!140;CL:0000037!1.86e-26!172;CL:0000566!1.86e-26!172;CL:0000988!9.12e-26!182;CL:0002031!2.25e-20!124;CL:0002032!3.81e-19!165;CL:0000837!3.81e-19!165;CL:0002087!3.60e-18!119;CL:0002393!3.83e-13!9;CL:0002397!3.83e-13!9;CL:0000838!4.08e-12!52;CL:0000542!8.16e-12!53;CL:0000051!8.16e-12!53;CL:0000784!1.35e-11!3;CL:0000451!7.21e-11!10;CL:0000842!1.99e-10!3;CL:0000766!1.40e-09!76;CL:0000557!2.54e-09!71;CL:0000624!6.06e-09!6;CL:0000763!1.18e-08!112;CL:0000049!1.18e-08!112;CL:0000080!1.22e-08!6;CL:0000134!1.90e-08!358;CL:0002320!4.39e-08!365;CL:0001014!4.41e-08!2;CL:0001016!4.41e-08!2;CL:0000224!6.43e-08!4;CL:0000219!2.23e-07!390;CL:0000839!4.50e-07!70;CL:0002274!5.15e-07!5;CL:0000457!5.15e-07!5;CL:0002191!5.15e-07!5;CL:0000097!5.15e-07!5;CL:0000831!5.15e-07!5;CL:0002028!5.15e-07!5;CL:0000084!6.53e-07!25;CL:0000827!6.53e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000784;8.58e-39;3!CL:0000451;1.46e-28;10!CL:0001014;1.12e-25;2!CL:0001016;1.12e-25;2!CL:0000097;3.47e-23;5!CL:0000840;2.27e-19;5!CL:0000163;3.59e-13;9!CL:0000990;3.98e-13;8!CL:0000453;7.14e-11;5!CL:0000236;3.31e-09;13!CL:0002393;3.56e-09;6!CL:0002397;3.56e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.75e-39,3;CL:0000451,1.55e-28,10;CL:0001014,1.12e-25,2;CL:0001016,1.12e-25,2;CL:0000097,2.77e-23,5;CL:0002028,2.77e-23,5;CL:0000738,1.69e-21,136;CL:0000840,2.34e-19,5;CL:0001029,2.34e-19,5;CL:0000037,4.19e-17,168;CL:0000988,3.76e-16,177;CL:0002031,9.66e-16,120;CL:0000163,3.17e-13,9;CL:0000990,4.06e-13,8;CL:0002032,2.42e-11,161;CL:0000837,2.42e-11,161;CL:0000557,6.24e-11,67;CL:0000453,7.14e-11,5;CL:0000236,1.24e-08,14;CL:0002087,1.34e-07,115;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.89e-11!102;UBERON:0003061!4.89e-11!102;UBERON:0002193!1.45e-09!112;UBERON:0002371!5.78e-09!80;UBERON:0001474!4.70e-08!86;UBERON:0002384!1.37e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!4.89e-11!102;UBERON:0003061!4.89e-11!102;UBERON:0002193!1.45e-09!112;UBERON:0002371!5.78e-09!80;UBERON:0001474!4.70e-08!86;UBERON:0002384!1.37e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-09,76;UBERON:0002390,3.70e-09,98;UBERON:0003061,3.70e-09,98;UBERON:0001474,8.35e-09,82;UBERON:0002193,3.21e-08,108;UBERON:0004765,5.90e-08,90;UBERON:0002405,1.13e-07,93;UBERON:0001434,4.41e-07,100;UBERON:0002384,9.92e-07,371 | |||
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| ||
|short_description=p@chr16:22218470..22218480,- | |short_description=p@chr16:22218470..22218480,- | ||
}} | }} |
Latest revision as of 07:09, 25 July 2015
Short description: | p@chr16:22218470..22218480, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:22218470..22218480, - |
Coexpression cluster: | C1411_immature_Dendritic_CD19_Mast_CD14_Neutrophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.75e-39 | 3 |
dendritic cell | 1.55e-28 | 10 |
CD1a-positive Langerhans cell | 1.12e-25 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-25 | 2 |
mast cell | 2.77e-23 | 5 |
basophil mast progenitor cell | 2.77e-23 | 5 |
leukocyte | 1.69e-21 | 136 |
immature conventional dendritic cell | 2.34e-19 | 5 |
common dendritic progenitor | 2.34e-19 | 5 |
hematopoietic stem cell | 4.19e-17 | 168 |
hematopoietic cell | 3.76e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 9.66e-16 | 120 |
endocrine cell | 3.17e-13 | 9 |
conventional dendritic cell | 4.06e-13 | 8 |
hematopoietic oligopotent progenitor cell | 2.42e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-11 | 161 |
granulocyte monocyte progenitor cell | 6.24e-11 | 67 |
Langerhans cell | 7.14e-11 | 5 |
B cell | 1.24e-08 | 14 |
nongranular leukocyte | 1.34e-07 | 115 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-09 | 76 |
hematopoietic system | 3.70e-09 | 98 |
blood island | 3.70e-09 | 98 |
bone element | 8.35e-09 | 82 |
hemolymphoid system | 3.21e-08 | 108 |
skeletal element | 5.90e-08 | 90 |
immune system | 1.13e-07 | 93 |
skeletal system | 4.41e-07 | 100 |
connective tissue | 9.92e-07 | 371 |