FFCP PHASE1:Hg19::chr16:89043267..89043276,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |EntrezGene=863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |HGNC=1537 | ||
|TSSclassifier=strong | |||
|UniProt=O75081 | |UniProt=O75081 | ||
|association_with_transcript=96bp_to_ENST00000268679_5end | |association_with_transcript=96bp_to_ENST00000268679_5end | ||
|cluster_id=chr16:89043267..89043276,- | |||
|coexpression_cluster_id=C370 | |coexpression_cluster_id=C370 | ||
|description=CAGE_peak_13_at_CBFA2T3_5end | |description=CAGE_peak_13_at_CBFA2T3_5end | ||
|id=chr16:89043267..89043276,- | |id=chr16:89043267..89043276,- | ||
|ontology_enrichment_celltype=CL:0000763!2.98e-29!112;CL:0000049!2.98e-29!112;CL:0000037!8.09e-26!172;CL:0000566!8.09e-26!172;CL:0002032!1.05e-25!165;CL:0000837!1.05e-25!165;CL:0000988!7.16e-24!182;CL:0000134!1.69e-07!358;CL:0002274!3.33e-07!5;CL:0000457!3.33e-07!5;CL:0002191!3.33e-07!5;CL:0000097!3.33e-07!5;CL:0000831!3.33e-07!5;CL:0002028!3.33e-07!5;CL:0002320!3.51e-07!365 | |ontology_enrichment_celltype=CL:0000763!2.98e-29!112;CL:0000049!2.98e-29!112;CL:0000037!8.09e-26!172;CL:0000566!8.09e-26!172;CL:0002032!1.05e-25!165;CL:0000837!1.05e-25!165;CL:0000988!7.16e-24!182;CL:0000134!1.69e-07!358;CL:0002274!3.33e-07!5;CL:0000457!3.33e-07!5;CL:0002191!3.33e-07!5;CL:0000097!3.33e-07!5;CL:0000831!3.33e-07!5;CL:0002028!3.33e-07!5;CL:0002320!3.51e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000763;6.20e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.04e-13,108;CL:0000049,9.04e-13,108;CL:0002032,1.66e-08,161;CL:0000837,1.66e-08,161;CL:0000037,3.86e-08,168;CL:0000988,1.04e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.30e-53!31;DOID:1240!3.29e-45!39;DOID:2531!3.81e-36!51;DOID:0060083!3.81e-36!51;DOID:1036!1.64e-22!8;DOID:0050686!1.73e-10!137 | |ontology_enrichment_disease=DOID:8692!2.30e-53!31;DOID:1240!3.29e-45!39;DOID:2531!3.81e-36!51;DOID:0060083!3.81e-36!51;DOID:1036!1.64e-22!8;DOID:0050686!1.73e-10!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.12e-44;31!DOID:1240;1.94e-25;39!DOID:1036;3.04e-25;8!DOID:9119;2.10e-23;1!DOID:8552;5.13e-23;1!DOID:2531;4.09e-19;51!DOID:0060083;4.09e-19;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.24e-45,31;DOID:1240,7.29e-36,39;DOID:2531,1.98e-27,51;DOID:0060083,1.98e-27,51;DOID:1036,2.80e-25,8;DOID:9119,2.10e-23,1;DOID:8552,5.13e-23,1;DOID:0050686,4.90e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.53e-08!7;UBERON:0002390!7.63e-08!102;UBERON:0003061!7.63e-08!102;UBERON:0002193!1.16e-07!112;UBERON:0002405!2.37e-07!115;UBERON:0002384!9.48e-07!375 | |ontology_enrichment_uberon=UBERON:0004177!1.53e-08!7;UBERON:0002390!7.63e-08!102;UBERON:0003061!7.63e-08!102;UBERON:0002193!1.16e-07!112;UBERON:0002405!2.37e-07!115;UBERON:0002384!9.48e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0.399158742865633,0.191505370132367,0.846694330895531,0,0.280797178113459,0,0.156679895773023,0,0.677167111206413,0.802940375518498,0.605399121573143,0.425846237690326,0,0,0,0.500547425135725,0,4.45449878232388,0,4.05683517713975,3.99686361597384,19.7381807122989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0.108647371922008,0,0,0,0,0.156980256395025,1.49590513710141,0.902382642468723,2.74487548044835,1.67821586975843,0.948768663620925,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,2.62696066397885,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0.751871343838829,0.837952543656503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.31037357147929,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0.399158742865633,0.191505370132367,0.846694330895531,0,0.280797178113459,0,0.156679895773023,0,0.677167111206413,0.802940375518498,0.605399121573143,0.425846237690326,0,0,0,0.500547425135725,0,4.45449878232388,0,4.05683517713975,3.99686361597384,19.7381807122989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0.108647371922008,0,0,0,0,0.156980256395025,1.49590513710141,0.902382642468723,2.74487548044835,1.67821586975843,0.948768663620925,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,2.62696066397885,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0.751871343838829,0.837952543656503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.31037357147929,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p13@CBFA2T3 | |short_description=p13@CBFA2T3 | ||
}} | }} |
Latest revision as of 10:45, 18 September 2015
Short description: | p13@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CBFA2T3_5end |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | 96bp_to_ENST00000268679_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.04e-13 | 108 |
common myeloid progenitor | 9.04e-13 | 108 |
hematopoietic oligopotent progenitor cell | 1.66e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-08 | 161 |
hematopoietic stem cell | 3.86e-08 | 168 |
hematopoietic cell | 1.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.24e-45 | 31 |
leukemia | 7.29e-36 | 39 |
hematologic cancer | 1.98e-27 | 51 |
immune system cancer | 1.98e-27 | 51 |
chronic leukemia | 2.80e-25 | 8 |
acute myeloid leukemia | 2.10e-23 | 1 |
chronic myeloid leukemia | 5.13e-23 | 1 |
organ system cancer | 4.90e-10 | 137 |