FFCP PHASE1:Hg19::chr17:39150341..39150346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85293 | |EntrezGene=85293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18890 | |HGNC=18890 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_HQ448442_5end | |association_with_transcript=3bp_to_HQ448442_5end | ||
|cluster_id=chr17:39150341..39150346,- | |||
|coexpression_cluster_id=C263 | |coexpression_cluster_id=C263 | ||
|description=CAGE_peak_2_at_KRTAP3-3_5end | |description=CAGE_peak_2_at_KRTAP3-3_5end | ||
|id=chr17:39150341..39150346,- | |id=chr17:39150341..39150346,- | ||
|ontology_enrichment_celltype=CL:0002535!5.56e-26!2 | |ontology_enrichment_celltype=CL:0002535!5.56e-26!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4362!1.81e-40!5;DOID:120!1.98e-08!27;DOID:193!6.44e-08!29 | |ontology_enrichment_disease=DOID:4362!1.81e-40!5;DOID:120!1.98e-08!27;DOID:193!6.44e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.48e-40,5;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0007029!3.99e-50!1;UBERON:0000002!5.98e-34!6;UBERON:0001560!5.98e-34!6;UBERON:0006955!5.56e-26!2;UBERON:0004801!5.56e-26!2;UBERON:0001723!1.12e-17!3;UBERON:0001033!1.12e-17!3;UBERON:0010056!1.12e-17!3;UBERON:0000014!1.13e-13!4;UBERON:0000995!1.53e-10!21;UBERON:0005795!4.14e-10!22;UBERON:0003975!4.14e-10!22;UBERON:0004175!5.06e-09!25 | |ontology_enrichment_uberon=UBERON:0007029!3.99e-50!1;UBERON:0000002!5.98e-34!6;UBERON:0001560!5.98e-34!6;UBERON:0006955!5.56e-26!2;UBERON:0004801!5.56e-26!2;UBERON:0001723!1.12e-17!3;UBERON:0001033!1.12e-17!3;UBERON:0010056!1.12e-17!3;UBERON:0000014!1.13e-13!4;UBERON:0000995!1.53e-10!21;UBERON:0005795!4.14e-10!22;UBERON:0003975!4.14e-10!22;UBERON:0004175!5.06e-09!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;2.32e-07;33!UBERON:0003100;2.32e-07;41!UBERON:0000474;2.32e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p2@KRTAP3-3 | |short_description=p2@KRTAP3-3 | ||
}} | }} |
Latest revision as of 04:19, 20 September 2015
Short description: | p2@KRTAP3-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRTAP3-3_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | 3bp_to_HQ448442_5end |
EntrezGene: | KRTAP3-3 |
HGNC: | 18890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.48e-40 | 5 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |