FFCP PHASE1:Hg19::chr17:42983891..42983900,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_U92979_5end | |association_with_transcript=-20bp_to_U92979_5end | ||
|cluster_id=chr17:42983891..42983900,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_31_at_GFAP_5end | |description=CAGE_peak_31_at_GFAP_5end | ||
|id=chr17:42983891..42983900,- | |id=chr17:42983891..42983900,- | ||
|ontology_enrichment_celltype=CL:0002605!5.27e-12!3;CL:0000128!9.94e-09!7;CL:0000126!9.94e-09!7;CL:0000127!9.94e-09!7;CL:0002453!9.94e-09!7 | |ontology_enrichment_celltype=CL:0002605!5.27e-12!3;CL:0000128!9.94e-09!7;CL:0000126!9.94e-09!7;CL:0000127!9.94e-09!7;CL:0002453!9.94e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.66e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.93e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.64e-22;3!UBERON:0003057;2.64e-22;3!UBERON:0006601;2.07e-11;82!UBERON:0006222;1.31e-08;1!UBERON:0005425;2.02e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-115!57;UBERON:0005068!1.16e-115!57;UBERON:0006241!1.16e-115!57;UBERON:0007135!1.16e-115!57;UBERON:0001017!2.94e-101!82;UBERON:0005743!3.49e-96!86;UBERON:0002616!3.81e-95!59;UBERON:0000073!2.49e-90!94;UBERON:0001016!2.49e-90!94;UBERON:0000955!1.02e-87!69;UBERON:0006238!1.02e-87!69;UBERON:0002780!2.67e-82!41;UBERON:0001890!2.67e-82!41;UBERON:0006240!2.67e-82!41;UBERON:0002020!1.72e-81!34;UBERON:0003528!1.72e-81!34;UBERON:0001893!6.66e-81!34;UBERON:0003080!3.37e-80!42;UBERON:0002791!8.88e-78!33;UBERON:0003075!1.55e-77!86;UBERON:0007284!1.55e-77!86;UBERON:0002346!1.10e-73!90;UBERON:0001869!1.14e-73!32;UBERON:0000956!1.15e-56!25;UBERON:0000203!1.15e-56!25;UBERON:0007023!3.10e-56!115;UBERON:0003056!3.75e-53!61;UBERON:0000033!3.76e-48!123;UBERON:0002619!1.02e-46!22;UBERON:0004121!2.36e-46!169;UBERON:0000153!1.73e-45!129;UBERON:0007811!1.73e-45!129;UBERON:0000924!4.64e-45!173;UBERON:0006601!4.64e-45!173;UBERON:0001950!4.34e-40!20;UBERON:0003076!9.14e-35!15;UBERON:0003057!9.14e-35!15;UBERON:0000025!6.68e-29!194;UBERON:0004732!1.02e-27!13;UBERON:0002308!7.64e-26!9;UBERON:0000125!7.64e-26!9;UBERON:0002420!2.57e-25!9;UBERON:0007245!2.57e-25!9;UBERON:0010009!2.57e-25!9;UBERON:0010011!2.57e-25!9;UBERON:0000454!2.57e-25!9;UBERON:0004733!2.76e-24!12;UBERON:0002028!2.76e-24!12;UBERON:0007277!2.76e-24!12;UBERON:0002298!2.36e-23!8;UBERON:0004111!2.58e-21!241;UBERON:0000200!4.68e-21!6;UBERON:0009663!1.05e-18!7;UBERON:0000349!1.40e-18!5;UBERON:0000477!1.68e-17!286;UBERON:0001871!5.10e-16!7;UBERON:0000483!2.10e-15!309;UBERON:0000064!2.51e-15!219;UBERON:0000119!3.71e-15!312;UBERON:0000369!9.10e-15!4;UBERON:0002435!9.10e-15!4;UBERON:0000204!9.10e-15!4;UBERON:0010082!9.10e-15!4;UBERON:0002680!1.52e-14!9;UBERON:0001895!1.52e-14!9;UBERON:0010092!1.52e-14!9;UBERON:0002240!6.69e-13!3;UBERON:0006331!7.82e-13!3;UBERON:0001896!1.45e-12!3;UBERON:0005290!1.45e-12!3;UBERON:0010096!1.45e-12!3;UBERON:0000475!2.25e-12!365;UBERON:0000988!2.88e-12!3;UBERON:0001872!1.13e-11!5;UBERON:0002771!1.15e-11!3;UBERON:0005383!1.19e-11!3;UBERON:0005382!1.19e-11!3;UBERON:0002148!4.71e-09!2;UBERON:0009662!4.71e-09!2;UBERON:0005162!5.51e-09!2;UBERON:0000122!5.51e-09!2;UBERON:0001897!6.94e-09!2;UBERON:0001954!9.81e-09!2;UBERON:0003022!9.81e-09!2;UBERON:0002421!9.81e-09!2;UBERON:0002600!9.81e-09!2;UBERON:0001873!1.67e-08!2;UBERON:0010122!1.67e-08!2;UBERON:0001876!1.94e-08!2;UBERON:0001870!4.87e-08!2;UBERON:0005174!6.89e-08!5;UBERON:0001137!6.89e-08!5;UBERON:0000062!1.18e-07!511;UBERON:0002021!3.63e-07!5;UBERON:0000481!3.89e-07!347;UBERON:0000923!4.71e-07!604;UBERON:0005291!4.71e-07!604;UBERON:0006598!4.71e-07!604;UBERON:0002532!4.71e-07!604;UBERON:0002050!5.06e-07!605;UBERON:0005423!5.06e-07!605;UBERON:0000922!8.21e-07!612 | |ontology_enrichment_uberon=UBERON:0001049!1.16e-115!57;UBERON:0005068!1.16e-115!57;UBERON:0006241!1.16e-115!57;UBERON:0007135!1.16e-115!57;UBERON:0001017!2.94e-101!82;UBERON:0005743!3.49e-96!86;UBERON:0002616!3.81e-95!59;UBERON:0000073!2.49e-90!94;UBERON:0001016!2.49e-90!94;UBERON:0000955!1.02e-87!69;UBERON:0006238!1.02e-87!69;UBERON:0002780!2.67e-82!41;UBERON:0001890!2.67e-82!41;UBERON:0006240!2.67e-82!41;UBERON:0002020!1.72e-81!34;UBERON:0003528!1.72e-81!34;UBERON:0001893!6.66e-81!34;UBERON:0003080!3.37e-80!42;UBERON:0002791!8.88e-78!33;UBERON:0003075!1.55e-77!86;UBERON:0007284!1.55e-77!86;UBERON:0002346!1.10e-73!90;UBERON:0001869!1.14e-73!32;UBERON:0000956!1.15e-56!25;UBERON:0000203!1.15e-56!25;UBERON:0007023!3.10e-56!115;UBERON:0003056!3.75e-53!61;UBERON:0000033!3.76e-48!123;UBERON:0002619!1.02e-46!22;UBERON:0004121!2.36e-46!169;UBERON:0000153!1.73e-45!129;UBERON:0007811!1.73e-45!129;UBERON:0000924!4.64e-45!173;UBERON:0006601!4.64e-45!173;UBERON:0001950!4.34e-40!20;UBERON:0003076!9.14e-35!15;UBERON:0003057!9.14e-35!15;UBERON:0000025!6.68e-29!194;UBERON:0004732!1.02e-27!13;UBERON:0002308!7.64e-26!9;UBERON:0000125!7.64e-26!9;UBERON:0002420!2.57e-25!9;UBERON:0007245!2.57e-25!9;UBERON:0010009!2.57e-25!9;UBERON:0010011!2.57e-25!9;UBERON:0000454!2.57e-25!9;UBERON:0004733!2.76e-24!12;UBERON:0002028!2.76e-24!12;UBERON:0007277!2.76e-24!12;UBERON:0002298!2.36e-23!8;UBERON:0004111!2.58e-21!241;UBERON:0000200!4.68e-21!6;UBERON:0009663!1.05e-18!7;UBERON:0000349!1.40e-18!5;UBERON:0000477!1.68e-17!286;UBERON:0001871!5.10e-16!7;UBERON:0000483!2.10e-15!309;UBERON:0000064!2.51e-15!219;UBERON:0000119!3.71e-15!312;UBERON:0000369!9.10e-15!4;UBERON:0002435!9.10e-15!4;UBERON:0000204!9.10e-15!4;UBERON:0010082!9.10e-15!4;UBERON:0002680!1.52e-14!9;UBERON:0001895!1.52e-14!9;UBERON:0010092!1.52e-14!9;UBERON:0002240!6.69e-13!3;UBERON:0006331!7.82e-13!3;UBERON:0001896!1.45e-12!3;UBERON:0005290!1.45e-12!3;UBERON:0010096!1.45e-12!3;UBERON:0000475!2.25e-12!365;UBERON:0000988!2.88e-12!3;UBERON:0001872!1.13e-11!5;UBERON:0002771!1.15e-11!3;UBERON:0005383!1.19e-11!3;UBERON:0005382!1.19e-11!3;UBERON:0002148!4.71e-09!2;UBERON:0009662!4.71e-09!2;UBERON:0005162!5.51e-09!2;UBERON:0000122!5.51e-09!2;UBERON:0001897!6.94e-09!2;UBERON:0001954!9.81e-09!2;UBERON:0003022!9.81e-09!2;UBERON:0002421!9.81e-09!2;UBERON:0002600!9.81e-09!2;UBERON:0001873!1.67e-08!2;UBERON:0010122!1.67e-08!2;UBERON:0001876!1.94e-08!2;UBERON:0001870!4.87e-08!2;UBERON:0005174!6.89e-08!5;UBERON:0001137!6.89e-08!5;UBERON:0000062!1.18e-07!511;UBERON:0002021!3.63e-07!5;UBERON:0000481!3.89e-07!347;UBERON:0000923!4.71e-07!604;UBERON:0005291!4.71e-07!604;UBERON:0006598!4.71e-07!604;UBERON:0002532!4.71e-07!604;UBERON:0002050!5.06e-07!605;UBERON:0005423!5.06e-07!605;UBERON:0000922!8.21e-07!612 | ||
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|short_description=p31@GFAP | |short_description=p31@GFAP | ||
}} | }} |
Latest revision as of 23:10, 24 September 2015
Short description: | p31@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -20bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.93e-10 | 3 |