FFCP PHASE1:Hg19::chr17:62966372..62966382,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:62966372..62966382,+ | |||
|coexpression_cluster_id=C2197 | |coexpression_cluster_id=C2197 | ||
|description=CAGE_peak_at_chr17:62966372..62966382,+ | |description=CAGE_peak_at_chr17:62966372..62966382,+ | ||
|id=chr17:62966372..62966382,+ | |id=chr17:62966372..62966382,+ | ||
|ontology_enrichment_celltype=CL:0000767!1.72e-22!3;CL:0000623!2.14e-22!3;CL:0000825!2.14e-22!3;CL:0000842!1.17e-21!3;CL:0000738!6.50e-18!140;CL:0000224!2.14e-16!4;CL:0000625!8.53e-16!11;CL:0000037!7.56e-14!172;CL:0000566!7.56e-14!172;CL:0000791!1.54e-13!18;CL:0000789!1.54e-13!18;CL:0002420!1.54e-13!18;CL:0002419!1.54e-13!18;CL:0000790!1.54e-13!18;CL:0000988!7.21e-13!182;CL:0000080!4.14e-11!6;CL:0002087!3.17e-10!119;CL:0000838!1.32e-09!52;CL:0000084!1.33e-09!25;CL:0000827!1.33e-09!25;CL:0000542!2.14e-09!53;CL:0000051!2.14e-09!53;CL:0002032!7.09e-09!165;CL:0000837!7.09e-09!165;CL:0000094!9.41e-09!8;CL:0002031!3.08e-08!124;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9 | |ontology_enrichment_celltype=CL:0000767!1.72e-22!3;CL:0000623!2.14e-22!3;CL:0000825!2.14e-22!3;CL:0000842!1.17e-21!3;CL:0000738!6.50e-18!140;CL:0000224!2.14e-16!4;CL:0000625!8.53e-16!11;CL:0000037!7.56e-14!172;CL:0000566!7.56e-14!172;CL:0000791!1.54e-13!18;CL:0000789!1.54e-13!18;CL:0002420!1.54e-13!18;CL:0002419!1.54e-13!18;CL:0000790!1.54e-13!18;CL:0000988!7.21e-13!182;CL:0000080!4.14e-11!6;CL:0002087!3.17e-10!119;CL:0000838!1.32e-09!52;CL:0000084!1.33e-09!25;CL:0000827!1.33e-09!25;CL:0000542!2.14e-09!53;CL:0000051!2.14e-09!53;CL:0002032!7.09e-09!165;CL:0000837!7.09e-09!165;CL:0000094!9.41e-09!8;CL:0002031!3.08e-08!124;CL:0002393!1.79e-07!9;CL:0002397!1.79e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000767;7.23e-55;3!CL:0000623;7.23e-55;3!CL:0000226;1.29e-24;3!CL:0000842;1.29e-24;3!CL:0000094;4.20e-21;8!CL:0000081;1.52e-15;11!CL:0000625;2.61e-15;11!CL:0000791;1.32e-09;18!CL:0000789;1.32e-09;18!CL:0002419;1.32e-09;18!CL:0000542;1.66e-07;53!CL:0000084;4.50e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,6.02e-55,3;CL:0000623,1.04e-54,3;CL:0000825,1.04e-54,3;CL:0000226,1.29e-24,3;CL:0000842,1.29e-24,3;CL:0000094,3.92e-21,8;CL:0000081,1.45e-15,11;CL:0000625,2.49e-15,11;CL:0000738,2.78e-15,136;CL:0000838,2.26e-12,52;CL:0000037,2.92e-12,168;CL:0000542,3.90e-12,53;CL:0000051,3.90e-12,53;CL:0000988,1.32e-11,177;CL:0000791,1.28e-09,18;CL:0000789,1.28e-09,18;CL:0002420,1.28e-09,18;CL:0002419,1.28e-09,18;CL:0000790,1.28e-09,18;CL:0002087,1.88e-09,115;CL:0002032,1.83e-08,161;CL:0000837,1.83e-08,161;CL:0000084,4.41e-07,25;CL:0000827,4.41e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.32e-09;18!CL:0000051;1.66e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr17:62966372..62966382,+ | |short_description=p@chr17:62966372..62966382,+ | ||
}} | }} |
Latest revision as of 19:55, 25 July 2015
Short description: | p@chr17:62966372..62966382, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:62966372..62966382, + |
Coexpression cluster: | C2197_Natural_CD8_CD4_Basophils_CD14_CD19_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 6.02e-55 | 3 |
natural killer cell | 1.04e-54 | 3 |
pro-NK cell | 1.04e-54 | 3 |
single nucleate cell | 1.29e-24 | 3 |
mononuclear cell | 1.29e-24 | 3 |
granulocyte | 3.92e-21 | 8 |
blood cell | 1.45e-15 | 11 |
CD8-positive, alpha-beta T cell | 2.49e-15 | 11 |
leukocyte | 2.78e-15 | 136 |
lymphoid lineage restricted progenitor cell | 2.26e-12 | 52 |
hematopoietic stem cell | 2.92e-12 | 168 |
lymphocyte | 3.90e-12 | 53 |
common lymphoid progenitor | 3.90e-12 | 53 |
hematopoietic cell | 1.32e-11 | 177 |
mature alpha-beta T cell | 1.28e-09 | 18 |
alpha-beta T cell | 1.28e-09 | 18 |
immature T cell | 1.28e-09 | 18 |
mature T cell | 1.28e-09 | 18 |
immature alpha-beta T cell | 1.28e-09 | 18 |
nongranular leukocyte | 1.88e-09 | 115 |
hematopoietic oligopotent progenitor cell | 1.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-08 | 161 |
T cell | 4.41e-07 | 25 |
pro-T cell | 4.41e-07 | 25 |