FFCP PHASE1:Hg19::chr19:15945775..15945784,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:15945775..15945784,+ | |||
|coexpression_cluster_id=C2479 | |coexpression_cluster_id=C2479 | ||
|description=CAGE_peak_at_chr19:15945775..15945784,+ | |description=CAGE_peak_at_chr19:15945775..15945784,+ | ||
|id=chr19:15945775..15945784,+ | |id=chr19:15945775..15945784,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.19e-11!3;CL:0002150!6.84e-11!3;CL:0000861!6.84e-11!3;CL:0000066!1.78e-10!254;CL:0002251!1.01e-07!21;CL:0002076!1.43e-07!43;CL:1000415!8.15e-07!2 | |ontology_enrichment_celltype=CL:0002541!4.19e-11!3;CL:0002150!6.84e-11!3;CL:0000861!6.84e-11!3;CL:0000066!1.78e-10!254;CL:0002251!1.01e-07!21;CL:0002076!1.43e-07!43;CL:1000415!8.15e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.60e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.68e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.45e-22!106;DOID:0050687!2.30e-20!143;DOID:162!6.39e-20!235;DOID:14566!2.91e-19!239;DOID:1749!8.62e-16!14;DOID:299!5.79e-13!25;DOID:1036!1.19e-09!8;DOID:0050686!1.02e-07!137;DOID:7!2.76e-07!39 | |ontology_enrichment_disease=DOID:305!7.45e-22!106;DOID:0050687!2.30e-20!143;DOID:162!6.39e-20!235;DOID:14566!2.91e-19!239;DOID:1749!8.62e-16!14;DOID:299!5.79e-13!25;DOID:1036!1.19e-09!8;DOID:0050686!1.02e-07!137;DOID:7!2.76e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:4468;7.98e-10;2!DOID:4074;1.51e-09;2!DOID:4905;1.51e-09;2!DOID:4929;1.51e-09;2!DOID:3498;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,7.98e-10,2;DOID:4074,1.57e-09,2;DOID:4905,1.57e-09,2;DOID:3498,1.57e-09,2;DOID:4929,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.48e-15!7;UBERON:0001173!1.48e-15!7;UBERON:0004912!1.48e-15!7;UBERON:0000344!1.65e-11!12;UBERON:0000476!4.19e-11!3;UBERON:0000920!4.19e-11!3;UBERON:0002110!1.88e-09!3;UBERON:0006242!1.88e-09!3;UBERON:0002394!5.38e-08!4;UBERON:0003928!5.38e-08!4;UBERON:0003124!6.99e-08!7;UBERON:0003343!3.82e-07!4;UBERON:0004785!3.82e-07!4 | |ontology_enrichment_uberon=UBERON:0002294!1.48e-15!7;UBERON:0001173!1.48e-15!7;UBERON:0004912!1.48e-15!7;UBERON:0000344!1.65e-11!12;UBERON:0000476!4.19e-11!3;UBERON:0000920!4.19e-11!3;UBERON:0002110!1.88e-09!3;UBERON:0006242!1.88e-09!3;UBERON:0002394!5.38e-08!4;UBERON:0003928!5.38e-08!4;UBERON:0003124!6.99e-08!7;UBERON:0003343!3.82e-07!4;UBERON:0004785!3.82e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.60e-23;3!UBERON:0000920;4.60e-23;3!UBERON:0004913;9.48e-18;1!UBERON:0003703;9.48e-18;1!UBERON:0001174;9.48e-18;1!UBERON:0004914;9.48e-18;1!UBERON:0005631;1.37e-07;10!UBERON:0000158;1.37e-07;10!UBERON:0002114;8.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.68e-23,3;UBERON:0004913,1.70e-17,1;UBERON:0003703,1.70e-17,1;UBERON:0001174,1.70e-17,1;UBERON:0004914,1.70e-17,1;UBERON:0003124,1.68e-10,7 | |||
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| ||
|short_description=p@chr19:15945775..15945784,+ | |short_description=p@chr19:15945775..15945784,+ | ||
}} | }} |
Latest revision as of 04:37, 26 July 2015
Short description: | p@chr19:15945775..15945784, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:15945775..15945784, + |
Coexpression cluster: | C2479_Wilms_clear_rectal_chorionic_epidermoid_acantholytic_liposarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.68e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.68e-23 | 3 |
hepatopancreatic ampulla | 1.70e-17 | 1 |
extrahepatic bile duct | 1.70e-17 | 1 |
common bile duct | 1.70e-17 | 1 |
duodenal papilla | 1.70e-17 | 1 |
chorion | 1.68e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.98e-10 | 2 |
pancreas adenocarcinoma | 1.57e-09 | 2 |
pancreatic carcinoma | 1.57e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.57e-09 | 2 |
tubular adenocarcinoma | 2.02e-09 | 2 |