FFCP PHASE1:Hg19::chr19:36393258..36393271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10870 | |EntrezGene=10870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16977 | |HGNC=16977 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBK5 | |UniProt=Q9UBK5 | ||
|association_with_transcript=-110bp_to_ENST00000246551,ENST00000437550,NM_001007469,NM_014266,uc002ock.1,uc002ocl.1_5end | |association_with_transcript=-110bp_to_ENST00000246551,ENST00000437550,NM_001007469,NM_014266,uc002ock.1,uc002ocl.1_5end | ||
|cluster_id=chr19:36393258..36393271,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_6_at_HCST_5end | |description=CAGE_peak_6_at_HCST_5end | ||
|id=chr19:36393258..36393271,+ | |id=chr19:36393258..36393271,+ | ||
|ontology_enrichment_celltype=CL:0000766!8.18e-22!76;CL:0000557!1.18e-21!71;CL:0002009!2.77e-21!65;CL:0000763!2.23e-20!112;CL:0000049!2.23e-20!112;CL:0002057!3.43e-20!42;CL:0002194!2.47e-19!63;CL:0000576!2.47e-19!63;CL:0000040!2.47e-19!63;CL:0000559!2.47e-19!63;CL:0000839!2.96e-19!70;CL:0000860!3.04e-19!45;CL:0000037!1.16e-15!172;CL:0000566!1.16e-15!172;CL:0000738!1.45e-15!140;CL:0002032!5.25e-15!165;CL:0000837!5.25e-15!165;CL:0000988!2.90e-14!182;CL:0002087!3.45e-13!119;CL:0002031!7.17e-13!124;CL:0000134!5.39e-12!358;CL:0002320!3.38e-11!365;CL:0000219!6.70e-10!390;CL:0000048!6.51e-09!430;CL:0000723!1.05e-08!436;CL:0000034!5.12e-08!444 | |ontology_enrichment_celltype=CL:0000766!8.18e-22!76;CL:0000557!1.18e-21!71;CL:0002009!2.77e-21!65;CL:0000763!2.23e-20!112;CL:0000049!2.23e-20!112;CL:0002057!3.43e-20!42;CL:0002194!2.47e-19!63;CL:0000576!2.47e-19!63;CL:0000040!2.47e-19!63;CL:0000559!2.47e-19!63;CL:0000839!2.96e-19!70;CL:0000860!3.04e-19!45;CL:0000037!1.16e-15!172;CL:0000566!1.16e-15!172;CL:0000738!1.45e-15!140;CL:0002032!5.25e-15!165;CL:0000837!5.25e-15!165;CL:0000988!2.90e-14!182;CL:0002087!3.45e-13!119;CL:0002031!7.17e-13!124;CL:0000134!5.39e-12!358;CL:0002320!3.38e-11!365;CL:0000219!6.70e-10!390;CL:0000048!6.51e-09!430;CL:0000723!1.05e-08!436;CL:0000034!5.12e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.12e-21;2!CL:0001016;1.12e-21;2!CL:0002581;1.37e-11;1!CL:0000453;3.12e-09;5!CL:0000840;7.82e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.12e-21,2;CL:0001016,1.12e-21,2;CL:0002581,1.31e-11,1;CL:0000453,3.12e-09,5;CL:0000840,7.83e-08,5;CL:0001029,7.83e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;1.18e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.18e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.50e-17!80;UBERON:0001474!2.60e-16!86;UBERON:0002390!6.23e-16!102;UBERON:0003061!6.23e-16!102;UBERON:0002193!8.90e-14!112;UBERON:0004765!2.61e-13!101;UBERON:0001434!2.61e-13!101;UBERON:0002384!1.53e-12!375;UBERON:0002405!1.51e-11!115;UBERON:0002204!1.29e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!1.50e-17!80;UBERON:0001474!2.60e-16!86;UBERON:0002390!6.23e-16!102;UBERON:0003061!6.23e-16!102;UBERON:0002193!8.90e-14!112;UBERON:0004765!2.61e-13!101;UBERON:0001434!2.61e-13!101;UBERON:0002384!1.53e-12!375;UBERON:0002405!1.51e-11!115;UBERON:0002204!1.29e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@HCST | |short_description=p6@HCST | ||
}} | }} |
Latest revision as of 14:23, 17 September 2015
Short description: | p6@HCST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HCST_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -110bp_to_ENST00000246551, ENST00000437550, NM_001007469, NM_014266, uc002ock.1, uc002ocl.1_5end |
EntrezGene: | HCST |
HGNC: | 16977 |
UniProt: | Q9UBK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.12e-21 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-21 | 2 |
perirenal preadipocyte | 1.31e-11 | 1 |
Langerhans cell | 3.12e-09 | 5 |
immature conventional dendritic cell | 7.83e-08 | 5 |
common dendritic progenitor | 7.83e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.18e-11 | 1 |