FFCP PHASE1:Hg19::chr19:3981964..3982023,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:3981964..3982023,- | |||
|coexpression_cluster_id=C1061 | |coexpression_cluster_id=C1061 | ||
|description=CAGE_peak_at_chr19:3981964..3982023,- | |description=CAGE_peak_at_chr19:3981964..3982023,- | ||
|id=chr19:3981964..3982023,- | |id=chr19:3981964..3982023,- | ||
|ontology_enrichment_celltype=CL:0002371!2.13e-09!591;CL:0000144!7.89e-09!625;CL:0000183!4.40e-07!59;CL:0000055!6.59e-07!180 | |ontology_enrichment_celltype=CL:0002371!2.13e-09!591;CL:0000144!7.89e-09!625;CL:0000183!4.40e-07!59;CL:0000055!6.59e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.78e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.76e-08!70;UBERON:0000486!1.22e-07!82;UBERON:0000914!3.65e-07!83;UBERON:0002329!3.65e-07!83;UBERON:0003077!3.65e-07!83;UBERON:0003059!3.65e-07!83;UBERON:0007282!3.65e-07!83;UBERON:0009618!3.65e-07!83;UBERON:0007285!3.65e-07!83;UBERON:0001134!6.66e-07!61;UBERON:0002036!6.66e-07!61;UBERON:0003082!6.66e-07!61;UBERON:0002385!9.75e-07!63;UBERON:0001015!9.75e-07!63;UBERON:0000383!9.75e-07!63 | |ontology_enrichment_uberon=UBERON:0004290!4.76e-08!70;UBERON:0000486!1.22e-07!82;UBERON:0000914!3.65e-07!83;UBERON:0002329!3.65e-07!83;UBERON:0003077!3.65e-07!83;UBERON:0003059!3.65e-07!83;UBERON:0007282!3.65e-07!83;UBERON:0009618!3.65e-07!83;UBERON:0007285!3.65e-07!83;UBERON:0001134!6.66e-07!61;UBERON:0002036!6.66e-07!61;UBERON:0003082!6.66e-07!61;UBERON:0002385!9.75e-07!63;UBERON:0001015!9.75e-07!63;UBERON:0000383!9.75e-07!63 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.58e-09,78;UBERON:0007524,3.33e-08,73;UBERON:0002329,3.67e-08,71;UBERON:0003059,3.67e-08,71;UBERON:0007282,3.67e-08,71;UBERON:0004290,3.67e-08,71;UBERON:0009618,3.67e-08,71;UBERON:0000926,7.10e-08,315;UBERON:0004120,7.10e-08,315;UBERON:0006603,7.10e-08,315;UBERON:0003077,7.39e-08,72;UBERON:0007285,7.39e-08,72;UBERON:0000486,9.45e-08,83;UBERON:0001134,5.16e-07,62;UBERON:0002036,5.16e-07,62;UBERON:0003082,5.16e-07,62;UBERON:0002385,7.56e-07,64;UBERON:0001015,7.56e-07,64;UBERON:0000383,7.56e-07,64 | |||
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| ||
|short_description=p@chr19:3981964..3982023,- | |short_description=p@chr19:3981964..3982023,- | ||
}} | }} |
Latest revision as of 07:31, 26 July 2015
Short description: | p@chr19:3981964..3982023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3981964..3982023, - |
Coexpression cluster: | C1061_skeletal_Bronchial_pancreas_iPS_diffuse_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.78e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.58e-09 | 78 |
dense mesenchyme tissue | 3.33e-08 | 73 |
somite | 3.67e-08 | 71 |
presomitic mesoderm | 3.67e-08 | 71 |
presumptive segmental plate | 3.67e-08 | 71 |
dermomyotome | 3.67e-08 | 71 |
trunk paraxial mesoderm | 3.67e-08 | 71 |
mesoderm | 7.10e-08 | 315 |
mesoderm-derived structure | 7.10e-08 | 315 |
presumptive mesoderm | 7.10e-08 | 315 |
paraxial mesoderm | 7.39e-08 | 72 |
presumptive paraxial mesoderm | 7.39e-08 | 72 |
multilaminar epithelium | 9.45e-08 | 83 |
skeletal muscle tissue | 5.16e-07 | 62 |
striated muscle tissue | 5.16e-07 | 62 |
myotome | 5.16e-07 | 62 |
muscle tissue | 7.56e-07 | 64 |
musculature | 7.56e-07 | 64 |
musculature of body | 7.56e-07 | 64 |