FFCP PHASE1:Hg19::chr1:11986442..11986502,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90231 | |EntrezGene=90231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28513 | |HGNC=28513 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYS2 | |UniProt=Q8IYS2 | ||
|association_with_transcript=0bp_to_ENST00000376572,ENST00000376576,NM_138346,uc001atk.2,uc001atl.1_5end | |association_with_transcript=0bp_to_ENST00000376572,ENST00000376576,NM_138346,uc001atk.2,uc001atl.1_5end | ||
|cluster_id=chr1:11986442..11986502,- | |||
|coexpression_cluster_id=C1811 | |coexpression_cluster_id=C1811 | ||
|description=CAGE_peak_1_at_KIAA2013_5end | |description=CAGE_peak_1_at_KIAA2013_5end | ||
|id=chr1:11986442..11986502,- | |id=chr1:11986442..11986502,- | ||
|ontology_enrichment_celltype=CL:0000183!3.05e-10!59;CL:0000222!3.75e-10!119;CL:0000359!7.86e-10!32;CL:0000192!1.21e-09!42;CL:0000514!1.21e-09!42;CL:0000680!2.11e-08!57;CL:0000056!2.11e-08!57;CL:0000355!2.11e-08!57;CL:0000187!3.04e-08!54;CL:0000220!5.71e-08!246;CL:0002321!6.03e-08!248;CL:0000055!3.84e-07!180;CL:0000115!6.55e-07!35 | |ontology_enrichment_celltype=CL:0000183!3.05e-10!59;CL:0000222!3.75e-10!119;CL:0000359!7.86e-10!32;CL:0000192!1.21e-09!42;CL:0000514!1.21e-09!42;CL:0000680!2.11e-08!57;CL:0000056!2.11e-08!57;CL:0000355!2.11e-08!57;CL:0000187!3.04e-08!54;CL:0000220!5.71e-08!246;CL:0002321!6.03e-08!248;CL:0000055!3.84e-07!180;CL:0000115!6.55e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.68e-09;32!CL:0000192;2.71e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.51e-10,121;CL:0000359,7.86e-10,32;CL:0000192,1.75e-09,43;CL:0000514,1.75e-09,43;CL:0000680,2.62e-08,58;CL:0000056,2.62e-08,58;CL:0000355,2.62e-08,58;CL:0000187,3.81e-08,55;CL:0002321,4.14e-08,250;CL:0000115,3.67e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;2.71e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.11e-18!118;UBERON:0004872!4.92e-15!84;UBERON:0001637!5.59e-14!42;UBERON:0003509!5.59e-14!42;UBERON:0004572!5.59e-14!42;UBERON:0001009!4.33e-13!113;UBERON:0001981!1.01e-12!60;UBERON:0007500!1.01e-12!60;UBERON:0004537!1.01e-12!60;UBERON:0006965!1.01e-12!60;UBERON:0004535!1.07e-12!110;UBERON:0000055!1.22e-12!69;UBERON:0002049!2.46e-12!79;UBERON:0007798!2.46e-12!79;UBERON:0000490!8.81e-11!138;UBERON:0005256!9.37e-11!143;UBERON:0004573!5.16e-10!33;UBERON:0004571!5.16e-10!33;UBERON:0000926!1.05e-08!448;UBERON:0004120!1.05e-08!448;UBERON:0006603!1.05e-08!448;UBERON:0002385!6.45e-08!63;UBERON:0001015!6.45e-08!63;UBERON:0000383!6.45e-08!63;UBERON:0000483!7.49e-08!309;UBERON:0000119!8.70e-08!312;UBERON:0004290!1.16e-07!70;UBERON:0000477!1.18e-07!286;UBERON:0001134!1.68e-07!61;UBERON:0002036!1.68e-07!61;UBERON:0003082!1.68e-07!61;UBERON:0000025!9.13e-07!194 | |ontology_enrichment_uberon=UBERON:0003914!1.11e-18!118;UBERON:0004872!4.92e-15!84;UBERON:0001637!5.59e-14!42;UBERON:0003509!5.59e-14!42;UBERON:0004572!5.59e-14!42;UBERON:0001009!4.33e-13!113;UBERON:0001981!1.01e-12!60;UBERON:0007500!1.01e-12!60;UBERON:0004537!1.01e-12!60;UBERON:0006965!1.01e-12!60;UBERON:0004535!1.07e-12!110;UBERON:0000055!1.22e-12!69;UBERON:0002049!2.46e-12!79;UBERON:0007798!2.46e-12!79;UBERON:0000490!8.81e-11!138;UBERON:0005256!9.37e-11!143;UBERON:0004573!5.16e-10!33;UBERON:0004571!5.16e-10!33;UBERON:0000926!1.05e-08!448;UBERON:0004120!1.05e-08!448;UBERON:0006603!1.05e-08!448;UBERON:0002385!6.45e-08!63;UBERON:0001015!6.45e-08!63;UBERON:0000383!6.45e-08!63;UBERON:0000483!7.49e-08!309;UBERON:0000119!8.70e-08!312;UBERON:0004290!1.16e-07!70;UBERON:0000477!1.18e-07!286;UBERON:0001134!1.68e-07!61;UBERON:0002036!1.68e-07!61;UBERON:0003082!1.68e-07!61;UBERON:0000025!9.13e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.35e-10;42!UBERON:0003509;2.35e-10;42!UBERON:0004572;2.35e-10;42!UBERON:0004573;4.47e-09;33!UBERON:0004571;4.47e-09;33!UBERON:0003914;9.74e-09;74!UBERON:0007500;1.08e-07;56!UBERON:0001981;1.08e-07;56!UBERON:0004537;1.08e-07;56 | |||
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|short_description=p1@KIAA2013 | |short_description=p1@KIAA2013 | ||
}} | }} |
Latest revision as of 11:50, 16 September 2015
Short description: | p1@KIAA2013 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA2013_5end |
Coexpression cluster: | C1811_Mesenchymal_Alveolar_Pericytes_Placental_Renal_Melanocyte_Fibroblast |
Association with transcript: | 0bp_to_ENST00000376572, ENST00000376576, NM_138346, uc001atk.2, uc001atl.1_5end |
EntrezGene: | KIAA2013 |
HGNC: | 28513 |
UniProt: | Q8IYS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.51e-10 | 121 |
vascular associated smooth muscle cell | 7.86e-10 | 32 |
smooth muscle cell | 1.75e-09 | 43 |
smooth muscle myoblast | 1.75e-09 | 43 |
muscle precursor cell | 2.62e-08 | 58 |
myoblast | 2.62e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-08 | 58 |
muscle cell | 3.81e-08 | 55 |
embryonic cell | 4.14e-08 | 250 |
endothelial cell | 3.67e-07 | 36 |