FFCP PHASE1:Hg19::chr19:10305581..10305646,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:10305581..10305646,-
|short_description=p1@DNMT1
|description=CAGE_peak_1_at_DNMT1_5end
|association_with_transcript=108bp_to_ENST00000340748,ENST00000359...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1786 | |EntrezGene=1786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2976 | |HGNC=2976 | ||
|TSSclassifier=strong | |||
|UniProt=P26358,F5GX68 | |UniProt=P26358,F5GX68 | ||
|association_with_transcript=108bp_to_ENST00000340748,ENST00000359526,ENST00000540357,NM_001130823,NM_001379,uc002mng.2,uc002mnh.2,uc010xlc.1,uc010xld.1_5end | |||
|cluster_id=chr19:10305581..10305646,- | |||
|coexpression_cluster_id=C1011 | |||
|description=CAGE_peak_1_at_DNMT1_5end | |||
|id=chr19:10305581..10305646,- | |||
|ontology_enrichment_celltype=CL:0002319!8.11e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.70e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.11e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.57e-36!235;DOID:14566!4.58e-35!239;DOID:2531!1.27e-24!51;DOID:0060083!1.27e-24!51;DOID:1240!1.03e-21!39;DOID:0050686!5.36e-18!137;DOID:8692!2.00e-17!31;DOID:0050687!1.87e-15!143;DOID:305!3.42e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.85e-17;39!DOID:8692;6.76e-17;31!DOID:2531;1.96e-15;51!DOID:0060083;1.96e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.57e-36,235;DOID:14566,4.58e-35,239;DOID:2531,1.27e-24,51;DOID:0060083,1.27e-24,51;DOID:1240,1.03e-21,39;DOID:0050686,5.36e-18,137;DOID:8692,2.00e-17,31;DOID:0050687,1.87e-15,143;DOID:305,3.42e-11,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@DNMT1 | |||
}} | }} |
Latest revision as of 23:51, 24 September 2015
Short description: | p1@DNMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNMT1_5end |
Coexpression cluster: | C1011_acute_granulocyte_Hodgkin_neuroepithelioma_retinoblastoma_hepatoblastoma_merkel |
Association with transcript: | 108bp_to_ENST00000340748, ENST00000359526, ENST00000540357, NM_001130823, NM_001379, uc002mng.2, uc002mnh.2, uc010xlc.1, uc010xld.1_5end |
EntrezGene: | DNMT1 |
HGNC: | 2976 |
UniProt: | P26358F5GX68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.11e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.57e-36 | 235 |
disease of cellular proliferation | 4.58e-35 | 239 |
hematologic cancer | 1.27e-24 | 51 |
immune system cancer | 1.27e-24 | 51 |
leukemia | 1.03e-21 | 39 |
organ system cancer | 5.36e-18 | 137 |
myeloid leukemia | 2.00e-17 | 31 |
cell type cancer | 1.87e-15 | 143 |
carcinoma | 3.42e-11 | 106 |