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FFCP PHASE1:Hg19::chr1:205313388..205313421,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=55220
|EntrezGene=55220
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=25573
|HGNC=25573
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-78bp_to_ENST00000539253_5end
|association_with_transcript=-78bp_to_ENST00000539253_5end
|cluster_id=chr1:205313388..205313421,-
|coexpression_cluster_id=C24
|coexpression_cluster_id=C24
|description=CAGE_peak_3_at_KLHDC8A_5end
|description=CAGE_peak_3_at_KLHDC8A_5end
|id=chr1:205313388..205313421,-
|id=chr1:205313388..205313421,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000047;1.46e-14;2!CL:0000764;3.52e-14;2!CL:0000558;3.52e-14;2
|ontology_enrichment_celltype_v019_2=CL:0000764,2.21e-14,2;CL:0000765,2.21e-14,2;CL:0000050,2.21e-14,2;CL:0000038,2.21e-14,2;CL:0000558,2.21e-14,2;CL:0000547,2.21e-14,2;CL:0000549,2.21e-14,2;CL:0000550,2.21e-14,2;CL:0000552,2.21e-14,2
|ontology_enrichment_development_v019=UBERON:0006215;9.28e-21;3!UBERON:0006222;6.18e-08;1
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.51e-45!57;UBERON:0005068!3.51e-45!57;UBERON:0006241!3.51e-45!57;UBERON:0007135!3.51e-45!57;UBERON:0007023!3.33e-44!115;UBERON:0005743!1.49e-42!86;UBERON:0000073!3.63e-41!94;UBERON:0001016!3.63e-41!94;UBERON:0002616!1.80e-40!59;UBERON:0001017!1.92e-39!82;UBERON:0003075!1.41e-35!86;UBERON:0007284!1.41e-35!86;UBERON:0000955!5.50e-34!69;UBERON:0006238!5.50e-34!69;UBERON:0002346!2.29e-33!90;UBERON:0002780!1.95e-32!41;UBERON:0001890!1.95e-32!41;UBERON:0006240!1.95e-32!41;UBERON:0003080!1.85e-31!42;UBERON:0003056!4.46e-27!61;UBERON:0000153!1.51e-24!129;UBERON:0007811!1.51e-24!129;UBERON:0000033!6.22e-24!123;UBERON:0004121!2.25e-23!169;UBERON:0002020!1.15e-22!34;UBERON:0003528!1.15e-22!34;UBERON:0000924!1.88e-22!173;UBERON:0006601!1.88e-22!173;UBERON:0001893!4.18e-22!34;UBERON:0001869!6.80e-22!32;UBERON:0002791!8.74e-21!33;UBERON:0002619!6.10e-18!22;UBERON:0001950!8.26e-18!20;UBERON:0000956!2.35e-17!25;UBERON:0000203!2.35e-17!25;UBERON:0003076!1.34e-14!15;UBERON:0003057!1.34e-14!15;UBERON:0001894!2.77e-13!7;UBERON:0006222!2.77e-13!7;UBERON:0004733!1.07e-12!12;UBERON:0002028!1.07e-12!12;UBERON:0007277!1.07e-12!12;UBERON:0004732!1.51e-11!13;UBERON:0000025!4.27e-11!194;UBERON:0000200!3.40e-10!6;UBERON:0001871!4.56e-10!7;UBERON:0002298!8.66e-09!8;UBERON:0004111!1.03e-08!241;UBERON:0000064!1.19e-08!219;UBERON:0000477!1.84e-08!286;UBERON:0003296!1.89e-08!4;UBERON:0010133!1.89e-08!4;UBERON:0002680!3.74e-08!9;UBERON:0001895!3.74e-08!9;UBERON:0010092!3.74e-08!9;UBERON:0000922!1.12e-07!612;UBERON:0000988!4.11e-07!3;UBERON:0000468!6.32e-07!659;UBERON:0000483!9.18e-07!309;UBERON:0002308!9.30e-07!9;UBERON:0000125!9.30e-07!9
|ontology_enrichment_uberon=UBERON:0001049!3.51e-45!57;UBERON:0005068!3.51e-45!57;UBERON:0006241!3.51e-45!57;UBERON:0007135!3.51e-45!57;UBERON:0007023!3.33e-44!115;UBERON:0005743!1.49e-42!86;UBERON:0000073!3.63e-41!94;UBERON:0001016!3.63e-41!94;UBERON:0002616!1.80e-40!59;UBERON:0001017!1.92e-39!82;UBERON:0003075!1.41e-35!86;UBERON:0007284!1.41e-35!86;UBERON:0000955!5.50e-34!69;UBERON:0006238!5.50e-34!69;UBERON:0002346!2.29e-33!90;UBERON:0002780!1.95e-32!41;UBERON:0001890!1.95e-32!41;UBERON:0006240!1.95e-32!41;UBERON:0003080!1.85e-31!42;UBERON:0003056!4.46e-27!61;UBERON:0000153!1.51e-24!129;UBERON:0007811!1.51e-24!129;UBERON:0000033!6.22e-24!123;UBERON:0004121!2.25e-23!169;UBERON:0002020!1.15e-22!34;UBERON:0003528!1.15e-22!34;UBERON:0000924!1.88e-22!173;UBERON:0006601!1.88e-22!173;UBERON:0001893!4.18e-22!34;UBERON:0001869!6.80e-22!32;UBERON:0002791!8.74e-21!33;UBERON:0002619!6.10e-18!22;UBERON:0001950!8.26e-18!20;UBERON:0000956!2.35e-17!25;UBERON:0000203!2.35e-17!25;UBERON:0003076!1.34e-14!15;UBERON:0003057!1.34e-14!15;UBERON:0001894!2.77e-13!7;UBERON:0006222!2.77e-13!7;UBERON:0004733!1.07e-12!12;UBERON:0002028!1.07e-12!12;UBERON:0007277!1.07e-12!12;UBERON:0004732!1.51e-11!13;UBERON:0000025!4.27e-11!194;UBERON:0000200!3.40e-10!6;UBERON:0001871!4.56e-10!7;UBERON:0002298!8.66e-09!8;UBERON:0004111!1.03e-08!241;UBERON:0000064!1.19e-08!219;UBERON:0000477!1.84e-08!286;UBERON:0003296!1.89e-08!4;UBERON:0010133!1.89e-08!4;UBERON:0002680!3.74e-08!9;UBERON:0001895!3.74e-08!9;UBERON:0010092!3.74e-08!9;UBERON:0000922!1.12e-07!612;UBERON:0000988!4.11e-07!3;UBERON:0000468!6.32e-07!659;UBERON:0000483!9.18e-07!309;UBERON:0002308!9.30e-07!9;UBERON:0000125!9.30e-07!9
|ontology_enrichment_uberon_v019=UBERON:0004733;1.48e-26;12!UBERON:0002028;1.48e-26;12!UBERON:0002680;2.01e-26;9!UBERON:0001895;2.01e-26;9!UBERON:0004732;1.87e-24;13!UBERON:0000988;7.08e-21;3!UBERON:0002298;3.95e-18;6!UBERON:0001905;2.79e-15;2!UBERON:0002757;2.79e-15;2!UBERON:0010134;2.79e-15;2!UBERON:0005408;2.79e-15;2!UBERON:0001899;2.79e-15;2!UBERON:0002148;3.52e-14;2!UBERON:0006331;3.52e-14;2!UBERON:0009662;3.52e-14;2!UBERON:0000178;4.14e-11;15!UBERON:0000179;4.14e-11;15!UBERON:0000463;4.14e-11;15!UBERON:0002037;1.17e-10;6!UBERON:0001894;1.68e-09;7!UBERON:0000073;4.24e-09;53!UBERON:0002616;4.24e-09;53!UBERON:0007023;8.13e-09;114!UBERON:0001016;4.22e-08;83!UBERON:0003296;4.55e-08;4!UBERON:0010133;4.55e-08;4!UBERON:0002784;4.55e-08;4!UBERON:0000955;5.77e-08;68!UBERON:0002372;6.18e-08;1!UBERON:0001961;6.18e-08;1!UBERON:0001744;6.18e-08;1!UBERON:0001042;6.18e-08;1!UBERON:0001735;6.18e-08;1!UBERON:0000125;3.89e-07;9!UBERON:0002308;3.89e-07;9!UBERON:0001017;5.60e-07;75
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|short_description=p3@KLHDC8A
|short_description=p3@KLHDC8A
}}
}}

Latest revision as of 02:45, 20 September 2015

Short description:p3@KLHDC8A
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_KLHDC8A_5end
Coexpression cluster:C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral
Association with transcript: -78bp_to_ENST00000539253_5end
EntrezGene:KLHDC8A
HGNC: 25573
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data