FFCP PHASE1:Hg19::chr1:223537283..223537286,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55061 | |EntrezGene=55061 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25470 | |HGNC=25470 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VX72 | |UniProt=Q5VX72 | ||
|association_with_transcript=-86bp_to_ENST00000342943_5end | |association_with_transcript=-86bp_to_ENST00000342943_5end | ||
|cluster_id=chr1:223537283..223537286,- | |||
|coexpression_cluster_id=C46 | |coexpression_cluster_id=C46 | ||
|description=CAGE_peak_6_at_SUSD4_5end | |description=CAGE_peak_6_at_SUSD4_5end | ||
|id=chr1:223537283..223537286,- | |id=chr1:223537283..223537286,- | ||
|ontology_enrichment_celltype=CL:0000624!2.53e-09!6;CL:0000084!9.71e-07!25;CL:0000827!9.71e-07!25 | |ontology_enrichment_celltype=CL:0000624!2.53e-09!6;CL:0000084!9.71e-07!25;CL:0000827!9.71e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.57e-09;6!CL:0000084;5.49e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.57e-09,6;CL:0000084,5.49e-09,25;CL:0000827,5.49e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.21e-22!115;UBERON:0001049!4.42e-20!57;UBERON:0005068!4.42e-20!57;UBERON:0006241!4.42e-20!57;UBERON:0007135!4.42e-20!57;UBERON:0002780!5.44e-20!41;UBERON:0001890!5.44e-20!41;UBERON:0006240!5.44e-20!41;UBERON:0003080!2.27e-19!42;UBERON:0001893!3.90e-16!34;UBERON:0002616!5.00e-16!59;UBERON:0001869!1.43e-15!32;UBERON:0002791!8.02e-15!33;UBERON:0002020!2.16e-14!34;UBERON:0003528!2.16e-14!34;UBERON:0002619!7.25e-14!22;UBERON:0000955!1.11e-13!69;UBERON:0006238!1.11e-13!69;UBERON:0003056!9.71e-13!61;UBERON:0005743!1.00e-12!86;UBERON:0000073!1.20e-12!94;UBERON:0001016!1.20e-12!94;UBERON:0001017!1.47e-12!82;UBERON:0002346!6.13e-12!90;UBERON:0003075!7.34e-12!86;UBERON:0007284!7.34e-12!86;UBERON:0000956!7.40e-12!25;UBERON:0000203!7.40e-12!25;UBERON:0001950!8.04e-11!20;UBERON:0000200!1.17e-08!6;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0000349!2.38e-07!5;UBERON:0002771!2.99e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!3.21e-22!115;UBERON:0001049!4.42e-20!57;UBERON:0005068!4.42e-20!57;UBERON:0006241!4.42e-20!57;UBERON:0007135!4.42e-20!57;UBERON:0002780!5.44e-20!41;UBERON:0001890!5.44e-20!41;UBERON:0006240!5.44e-20!41;UBERON:0003080!2.27e-19!42;UBERON:0001893!3.90e-16!34;UBERON:0002616!5.00e-16!59;UBERON:0001869!1.43e-15!32;UBERON:0002791!8.02e-15!33;UBERON:0002020!2.16e-14!34;UBERON:0003528!2.16e-14!34;UBERON:0002619!7.25e-14!22;UBERON:0000955!1.11e-13!69;UBERON:0006238!1.11e-13!69;UBERON:0003056!9.71e-13!61;UBERON:0005743!1.00e-12!86;UBERON:0000073!1.20e-12!94;UBERON:0001016!1.20e-12!94;UBERON:0001017!1.47e-12!82;UBERON:0002346!6.13e-12!90;UBERON:0003075!7.34e-12!86;UBERON:0007284!7.34e-12!86;UBERON:0000956!7.40e-12!25;UBERON:0000203!7.40e-12!25;UBERON:0001950!8.04e-11!20;UBERON:0000200!1.17e-08!6;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0000349!2.38e-07!5;UBERON:0002771!2.99e-07!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@SUSD4 | |short_description=p6@SUSD4 | ||
}} | }} |
Latest revision as of 21:48, 15 September 2015
Short description: | p6@SUSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SUSD4_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -86bp_to_ENST00000342943_5end |
EntrezGene: | SUSD4 |
HGNC: | 25470 |
UniProt: | Q5VX72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.57e-09 | 6 |
T cell | 5.49e-09 | 25 |
pro-T cell | 5.49e-09 | 25 |